RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 AGPAT2O15120 278 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 MRPS12O15235 138 aaKnown RBP3.6□□□□□ -1.83
SNHG1-207ENST00000537965 SPINK4O60575 86 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 ZNF253O75346 499 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 MPDU1O75352 247 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 SFT2D2O95562 160 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 ORM1P02763 201 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 SMR3BP02814 79 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-207ENST00000537965 CT45A10P0DMU9 189 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 SRIP30626 198 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 CRYBA4P53673 196 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 TCL1AP56279 114 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 KRTAP10-1P60331 282 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 C10orf113Q5VZT2 155 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 PATE2Q6UY27 113 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 IQCF2Q8IXL9 164 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 TOMM5Q8N4H5 51 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 OR1L4Q8NGR5 311 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 PFDN5Q99471 154 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 VGLL1Q99990 258 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 MRPL32Q9BYC8 188 aaKnown RBP3.6□□□□□ -1.83
SNHG1-207ENST00000537965 DNAJC4Q9NNZ3 241 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 GSN-AS1Q9NRJ2 163 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 CCDC59Q9P031 241 aaKnown RBP3.6□□□□□ -1.83
SNHG1-207ENST00000537965 MDFICQ9P1T7 246 aa3.6□□□□□ -1.83
SNHG1-207ENST00000537965 KLLNB2CW77 178 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 PRAF2O60831 178 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 TSC22D2O75157 780 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 GPX1P07203 203 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 OR4E1P0C645 316 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 METTL15P1P0C7V9 234 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 DNAH10OSP0CZ25 163 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 HIST1H1EP10412 219 aaKnown RBP3.59□□□□□ -1.83
SNHG1-207ENST00000537965 RRAS2P62070 204 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-207ENST00000537965 PPP1R1AQ13522 171 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 PDE6HQ13956 83 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 TDRG1Q3Y452 100 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 TMEM78Q5T7P6 136 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 TMEM14EPQ6UXP3 125 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 C11orf72Q8NBR9 251 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 MCFD2Q8NI22 146 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 DEFB104AQ8WTQ1 72 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 RAB2BQ8WUD1 216 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 SAT2Q96F10 170 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-207ENST00000537965 BCL7BQ9BQE9 202 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 NAA50Q9GZZ1 169 aaKnown RBP3.59□□□□□ -1.83
SNHG1-207ENST00000537965 C20orf85Q9H1P6 137 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 KLF12Q9Y4X4 402 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 TIMM9Q9Y5J7 89 aa3.59□□□□□ -1.83
SNHG1-207ENST00000537965 HERC1Q15751 4861 aa3.59□□□□□ -1.84
SNHG1-207ENST00000537965 IGHV1OR15-1A0A075B7D0 117 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 TRBV7-9A0A0J9YWB2 115 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 C9JCJ5 164 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 SSSCA1O60232 199 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 NOL3O60936 208 aaKnown RBP3.58□□□□□ -1.84
SNHG1-207ENST00000537965 CRYGDP07320 174 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 IGLC2P0DOY2 106 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 CRISP2P16562 243 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 RNASE4P34096 147 aaKnown RBP3.58□□□□□ -1.84
SNHG1-207ENST00000537965 FUSP35637 526 aaKnown RBP eCLIP3.58□□□□□ -1.84
SNHG1-207ENST00000537965 SLC38A11Q08AI6 406 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 ZNF415Q09FC8 603 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 OPCMLQ14982 345 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 DYNC2LI1Q8TCX1 351 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 SOSTQ9BQB4 213 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 SPXQ9BT56 116 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 PARD6GQ9BYG4 376 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-207ENST00000537965 SRRQ9GZT4 340 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 SH3BGRL3Q9H299 93 aa3.58□□□□□ -1.84
SNHG1-207ENST00000537965 VPS13BQ7Z7G8 4022 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 APOBP04114 4563 aaKnown RBP3.57□□□□□ -1.84
SNHG1-207ENST00000537965 TRAV8-6A0A0B4J262 113 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 IGHV3-38A0A0C4DH36 116 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 LINC00854A0A1B0GVQ3 168 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 C9orf170A2RU37 121 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 NAP1L6A6NFF2 107 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 PRAC2D3DTV9 90 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 E5RGE8 158 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 H3BQ15 152 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 K7EQD1 137 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 L7N2F9 121 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 SLC17A3O00476 420 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 CIDEAO60543 219 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 IGHV3-53P01767 116 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 SNRPCP09234 159 aaKnown RBP3.57□□□□□ -1.84
SNHG1-207ENST00000537965 CAMLGP49069 296 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 INPP1P49441 399 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 CAMPP49913 170 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 TMBIM6P55061 237 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 CNPY1Q3B7I2 92 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 PYDC2Q56P42 97 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 OR10G4Q8NGN3 311 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 TMEM37Q8WXS4 190 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 MRPS26Q9BYN8 205 aaKnown RBP3.57□□□□□ -1.84
SNHG1-207ENST00000537965 SLC25A31Q9H0C2 315 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 SLC39A9Q9NUM3 307 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 MRPL16Q9NX20 251 aaKnown RBP3.57□□□□□ -1.84
SNHG1-207ENST00000537965 TMEM14CQ9P0S9 112 aa3.57□□□□□ -1.84
SNHG1-207ENST00000537965 TRBV19A0A075B6N1 114 aa3.56□□□□□ -1.84
SNHG1-207ENST00000537965 TRAV4A0A0B4J268 109 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 259.2 ms