RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 PSMB2P49721 201 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 PCBD1P61457 104 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 HBBP68871 147 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 RPL18Q07020 188 aaKnown RBP3.02□□□□□ -1.93
CTR9-205ENST00000529898 ERCC8Q13216 396 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 CST6Q15828 149 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 LINC01590Q5TEZ4 76 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 FAM104BQ5XKR9 115 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 SLC48A1Q6P1K1 146 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 SCGB1D4Q6XE38 83 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 LINC00305Q7Z4B0 112 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 KRTAP7-1Q8IUC3 87 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 BRK1Q8WUW1 75 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 UBE2WQ96B02 151 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 CNRIP1Q96F85 164 aaPredicted RBP3.02□□□□□ -1.93
CTR9-205ENST00000529898 PRRG4Q9BZD6 226 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 FGF22Q9HCT0 170 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 AMMECR1Q9Y4X0 333 aaPredicted RBP3.02□□□□□ -1.93
CTR9-205ENST00000529898 ATG2BQ96BY7 2078 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 CACNA1CQ13936 2221 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 FREM3P0C091 2139 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 C19orf71A6NCJ1 209 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 CPSF4LA6NMK7 179 aaKnown RBP3.01□□□□□ -1.93
CTR9-205ENST00000529898 C4orf51C9J302 202 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 MRPS12O15235 138 aaKnown RBP3.01□□□□□ -1.93
CTR9-205ENST00000529898 NDUFS5O43920 106 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 LYPD3O95274 346 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 SUB1P53999 127 aaKnown RBP eCLIP3.01□□□□□ -1.93
CTR9-205ENST00000529898 ERVK-16P61578 105 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 DAZ2Q13117 558 aaKnown RBP3.01□□□□□ -1.93
CTR9-205ENST00000529898 ATXN8Q156A1 80 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 DAZ4Q86SG3 579 aaKnown RBP3.01□□□□□ -1.93
CTR9-205ENST00000529898 NDUFA11Q86Y39 141 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 LINC01561Q8N1V8 128 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 NT5CQ8TCD5 201 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 KLK6Q92876 244 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 ZNF414Q96IQ9 312 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 IGF2BP2-AS1Q96M15 143 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 HIST1H4GQ99525 98 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 LITAFQ99732 161 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 DEFB127Q9H1M4 99 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 PLEKHA3Q9HB20 300 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 DAZ3Q9NR90 486 aaKnown RBP3.01□□□□□ -1.93
CTR9-205ENST00000529898 TMEM167BQ9NRX6 74 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 TAS2R4Q9NYW5 299 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 TP73-AS1Q9UF72 201 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 UNC80Q8N2C7 3258 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 ADAMTS9Q9P2N4 1935 aa3.01□□□□□ -1.93
CTR9-205ENST00000529898 MYO7AQ13402 2215 aa3□□□□□ -1.93
CTR9-205ENST00000529898 ARHGAP21Q5T5U3 1957 aa3□□□□□ -1.93
CTR9-205ENST00000529898 PCDH15Q96QU1 1955 aa3□□□□□ -1.93
CTR9-205ENST00000529898 CXorf51AA0A1B0GTR3 108 aa3□□□□□ -1.93
CTR9-205ENST00000529898 A0A1B0GWA3 101 aa3□□□□□ -1.93
CTR9-205ENST00000529898 K7ERJ3 54 aa3□□□□□ -1.93
CTR9-205ENST00000529898 SRSF10O75494 262 aaKnown RBP3□□□□□ -1.93
CTR9-205ENST00000529898 TCRAP04437 139 aa3□□□□□ -1.93
CTR9-205ENST00000529898 LGALS3P17931 250 aaKnown RBP3□□□□□ -1.93
CTR9-205ENST00000529898 UBE2E1P51965 193 aa3□□□□□ -1.93
CTR9-205ENST00000529898 EFNA4P52798 201 aa3□□□□□ -1.93
CTR9-205ENST00000529898 MFAP2P55001 183 aa3□□□□□ -1.93
CTR9-205ENST00000529898 DAD1P61803 113 aa3□□□□□ -1.93
CTR9-205ENST00000529898 ZNF56Q15929 161 aa3□□□□□ -1.93
CTR9-205ENST00000529898 WDR38Q5JTN6 314 aa3□□□□□ -1.93
CTR9-205ENST00000529898 ZC2HC1BQ5TFG8 222 aa3□□□□□ -1.93
CTR9-205ENST00000529898 RAB42Q8N4Z0 105 aa3□□□□□ -1.93
CTR9-205ENST00000529898 VSIG2Q96IQ7 327 aa3□□□□□ -1.93
CTR9-205ENST00000529898 UBE2E2Q96LR5 201 aa3□□□□□ -1.93
CTR9-205ENST00000529898 DSCR8Q96T75 97 aa3□□□□□ -1.93
CTR9-205ENST00000529898 TM2D3Q9BRN9 247 aa3□□□□□ -1.93
CTR9-205ENST00000529898 HHLA3Q9XRX5 114 aa3□□□□□ -1.93
CTR9-205ENST00000529898 KLK5Q9Y337 293 aaPredicted RBP3□□□□□ -1.93
CTR9-205ENST00000529898 SLC25A15Q9Y619 301 aa3□□□□□ -1.93
CTR9-205ENST00000529898 F11RQ9Y624 299 aaKnown RBP3□□□□□ -1.93
CTR9-205ENST00000529898 SELENOKQ9Y6D0 94 aa3□□□□□ -1.93
CTR9-205ENST00000529898 THADAQ6YHU6 1953 aa3□□□□□ -1.93
CTR9-205ENST00000529898 MYO7BQ6PIF6 2116 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 AGRNO00468 2067 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 XIRP2A4UGR9 3374 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 DNAH14Q0VDD8 3507 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 A0A0B4J2C4 111 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 IGKV1-8A0A0C4DH67 115 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 LOC107984156A0A0G2JMH3 177 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 A0A1B0GVY2 172 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 LINC01546A6NGU7 62 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 PMS2P5A8MQ11 134 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 SS18L1O75177 396 aaPredicted RBP2.99□□□□□ -1.93
CTR9-205ENST00000529898 IGKV1D-33P01593 117 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 IGKV1-33P01594 117 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 PRSS1P07477 247 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 SLC25A16P16260 332 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 DUTP33316 252 aaKnown RBP2.99□□□□□ -1.93
CTR9-205ENST00000529898 NCBP2P52298 156 aaKnown RBP eCLIP2.99□□□□□ -1.93
CTR9-205ENST00000529898 APOC4P55056 127 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 SYNJ2BPP57105 145 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 HERVK_113P61574 105 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 TMEM52BQ4KMG9 183 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 C14orf177Q52M58 125 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 PVRIGQ6DKI7 326 aa2.99□□□□□ -1.93
CTR9-205ENST00000529898 KTN1-AS1Q86SY8 53 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 205.9 ms