RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 HIST1H2BAQ96A08 127 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 FAM19A4Q96LR4 140 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 DKK2Q9UBU2 259 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 NAGKQ9UJ70 344 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 CELA1Q9UNI1 258 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 TRGV11A0A075B6L2 103 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 IGHV1OR15-1A0A075B7D0 117 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 TRAV8-1A0A0A6YYK1 113 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 TRAV21A0A0B4J279 112 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 FAM74A7A6NL05 159 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 IGLL5B9A064 214 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 PEX7O00628 323 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 DEFB130BP0DP73 79 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 DEFB130AP0DP74 79 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 AKR1C3P42330 323 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 FHITP49789 147 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 FLI1Q01543 452 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 CD300CQ08708 224 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 KIR3DS1Q14943 382 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 C12orf74Q32Q52 190 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 SMUG1Q53HV7 270 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 ZNF767PQ75MW2 155 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 PRNTQ86SH4 94 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 C9orf62Q8N4C0 152 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 ZFAND2AQ8N6M9 145 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 RNASE8Q8TDE3 154 aaKnown RBP3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 MBD3L1Q8WWY6 194 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 FMC1Q96HJ9 113 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 KCNS1Q96KK3 526 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 FAM210BQ96KR6 192 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 LINC00467Q9BRT7 94 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 TMPRSS5Q9H3S3 457 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 SDF2L1Q9HCN8 221 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 NOP10Q9NPE3 64 aaKnown RBP3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 MANBALQ9NQG1 85 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 PSG8Q9UQ74 426 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 STAB2Q8WWQ8 2551 aa3.87□□□□□ -1.79
HMGB1P40-201ENST00000525121 TRGV2A0A075B6R0 118 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 LCE6AA0A183 80 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 A0A1B0GVG6 124 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 PAGE4O60829 102 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 ZNF324O75467 553 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 ATP5G1P05496 136 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 S100A9P06702 114 aaKnown RBP3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 AZU1P20160 251 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 TAGLN2P37802 199 aaKnown RBP3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 ATP5G3P48201 142 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 SULT1A2P50226 295 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 DAZ2Q13117 558 aaKnown RBP3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 ANXA2RQ3ZCQ2 193 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 MUC21Q5SSG8 566 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 IBA57Q5T440 356 aaKnown RBP3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 Q6AWC8 147 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 SGK494Q96LW2 274 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 NDUFAF3Q9BU61 184 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 GNG13Q9P2W3 67 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 BOLA1Q9Y3E2 137 aa3.86□□□□□ -1.79
HMGB1P40-201ENST00000525121 IGHV4-4A0A075B6R2 117 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 TRGV1A0A0A0MS02 117 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 TRAV1-1A0A0B4J248 108 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 TRAV34A0A0B4J273 112 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 GAGE12BA1L429 117 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 F5H768 121 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 GAGE7O76087 117 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 LY6G6CO95867 125 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 GCGP01275 180 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 PRM2P04554 102 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 PFN1P07737 140 aaKnown RBP3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 GAGE12FP0CL80 117 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 GAGE12GP0CL81 117 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 GAGE12IP0CL82 117 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 TCL1AP56279 114 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 BLOC1S1P78537 153 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 TMEM183BQ1AE95 376 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 PRR9Q5T870 116 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 Q86TA4 180 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 TMEM183AQ8IXX5 376 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 C15orf53Q8NAA6 179 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 TXNDC17Q9BRA2 123 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 GSN-AS1Q9NRJ2 163 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 ZFP30Q9Y2G7 519 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 AGRNO00468 2067 aa3.85□□□□□ -1.79
HMGB1P40-201ENST00000525121 COL7A1Q02388 2944 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 TENM3Q9P273 2699 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 TRBV6-1A0A0K0K1D8 114 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 PLAC8L1A1L4L8 177 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 FABP5P3A8MUU1 101 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 PDE6DO43924 150 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 P0DMU3 169 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 FAM231AP0DMU4 169 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 FAM231CP0DMU5 169 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 S100A4P26447 101 aaKnown RBP3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 NKX2-5P52952 324 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 LGALS9BQ3B8N2 356 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 TDRG1Q3Y452 100 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 FAM162BQ5T6X4 162 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 ALKAL2Q6UX46 152 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 UBE2DNLQ8IWF7 75 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 LINC00476Q8WZB0 136 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 C8orf49Q96NF6 230 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms