RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 HS3ST6Q96QI5 342 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 NMNAT3Q96T66 252 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 CHCHD5Q9BSY4 110 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 SAP30LQ9HAJ7 183 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 HLA-DRB4X5D2U9 266 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 NIPBLQ6KC79 2804 aaeCLIP5.89□□□□□ -1.47
HDAC3-216ENST00000523088 TLN2Q9Y4G6 2542 aa5.89□□□□□ -1.47
HDAC3-216ENST00000523088 A0A1W2PNR3 127 aa5.89□□□□□ -1.47
HDAC3-216ENST00000523088 ZFP92A6NM28 416 aa5.89□□□□□ -1.47
HDAC3-216ENST00000523088 EIF4EBP3O60516 100 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-216ENST00000523088 HLA-DQA1P01909 254 aa5.89□□□□□ -1.47
HDAC3-216ENST00000523088 ACYP1P07311 99 aa5.89□□□□□ -1.47
HDAC3-216ENST00000523088 CD7P09564 240 aa5.89□□□□□ -1.47
HDAC3-216ENST00000523088 VSIG8P0DPA2 414 aa5.89□□□□□ -1.47
HDAC3-216ENST00000523088 DSCR9P59020 149 aa5.89□□□□□ -1.47
HDAC3-216ENST00000523088 NPC2P61916 151 aa5.89□□□□□ -1.47
HDAC3-216ENST00000523088 KCTD18Q6PI47 426 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-216ENST00000523088 SCGB1D4Q6XE38 83 aa5.89□□□□□ -1.47
HDAC3-216ENST00000523088 KRTAP1-3Q8IUG1 177 aa5.89□□□□□ -1.47
HDAC3-216ENST00000523088 ZNF584Q8IVC4 421 aa5.89□□□□□ -1.47
HDAC3-216ENST00000523088 ZC2HC1AQ96GY0 325 aa5.89□□□□□ -1.47
HDAC3-216ENST00000523088 NF1P21359 2839 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 IGHV3-15A0A0B4J1V0 119 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 TRAV2A0A0B4J234 112 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 LINC01619G3V211 115 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 APOHP02749 345 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-216ENST00000523088 IGHV1-2P23083 117 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 DAD1P61803 113 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 BSPH1Q075Z2 132 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 C1orf140Q5VVS0 124 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 EBLN2Q6P2I7 272 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 NEXN-AS1Q8NBZ9 246 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 OR2T6Q8NHC8 308 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 H1FXQ92522 213 aaKnown RBP5.88□□□□□ -1.47
HDAC3-216ENST00000523088 CHCHD1Q96BP2 118 aaKnown RBP5.88□□□□□ -1.47
HDAC3-216ENST00000523088 C18orf15Q96N68 181 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 PRSS27Q9BQR3 290 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 TXNDC17Q9BRA2 123 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 DPH3P1Q9H4G8 78 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 AP5S1Q9NUS5 200 aa5.88□□□□□ -1.47
HDAC3-216ENST00000523088 ZNF256Q9Y2P7 627 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-216ENST00000523088 ABCA1O95477 2261 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 CSPG4Q6UVK1 2322 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 IGHV1-58A0A0C4DH39 117 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 J3QRE1 110 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 OVOL3O00110 214 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 LGALS9O00182 355 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 LYPD3O95274 346 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 CCL1P22362 96 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 ZNF134P52741 427 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 LINC00305Q7Z4B0 112 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 COX8CQ7Z4L0 72 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 FBXL14Q8N1E6 418 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 BRK1Q8WUW1 75 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 ABHD14BQ96IU4 210 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 HDHD3Q9BSH5 251 aaPredicted RBP5.87□□□□□ -1.47
HDAC3-216ENST00000523088 IL36BQ9NZH7 164 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 V9GY05 133 aa5.87□□□□□ -1.47
HDAC3-216ENST00000523088 TRAV8-2A0A0B4J237 113 aa5.86□□□□□ -1.47
HDAC3-216ENST00000523088 MDFIC2A0A1B0GVS7 189 aa5.86□□□□□ -1.47
HDAC3-216ENST00000523088 PLAC8L1A1L4L8 177 aa5.86□□□□□ -1.47
HDAC3-216ENST00000523088 SRRM4A7MD48 611 aaKnown RBP5.86□□□□□ -1.47
HDAC3-216ENST00000523088 HAX1O00165 279 aa5.86□□□□□ -1.47
HDAC3-216ENST00000523088 SMCPP49901 116 aaPredicted RBP5.86□□□□□ -1.47
HDAC3-216ENST00000523088 SUB1P53999 127 aaKnown RBP eCLIP5.86□□□□□ -1.47
HDAC3-216ENST00000523088 CCL8P80075 99 aa5.86□□□□□ -1.47
HDAC3-216ENST00000523088 PVRIGQ6DKI7 326 aa5.86□□□□□ -1.47
HDAC3-216ENST00000523088 C22orf34Q6ZV56 151 aa5.86□□□□□ -1.47
HDAC3-216ENST00000523088 TM2D3Q9BRN9 247 aa5.86□□□□□ -1.47
HDAC3-216ENST00000523088 RBM12B-AS1Q9P1G2 102 aa5.86□□□□□ -1.47
HDAC3-216ENST00000523088 SLC25A15Q9Y619 301 aa5.86□□□□□ -1.47
HDAC3-216ENST00000523088 LY96Q9Y6Y9 160 aa5.86□□□□□ -1.47
HDAC3-216ENST00000523088 ARFGEF3Q5TH69 2177 aa5.86□□□□□ -1.47
HDAC3-216ENST00000523088 CR1P17927 2039 aa5.86□□□□□ -1.47
HDAC3-216ENST00000523088 RTTNQ86VV8 2226 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 TRAV8-4A0A0B4J246 113 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 PAX4O43316 350 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 SPRY3O43610 288 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 NDUFS5O43920 106 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 TCL1BO95988 128 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 AVPP01185 164 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 ASAH2BP0C7U1 165 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 SLC25A16P16260 332 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 ZNF20P17024 532 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 ERCC8Q13216 396 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 LAGE3Q14657 143 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 ZNF726P1Q15940 193 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 SP6Q3SY56 376 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 Q6ZQT7 251 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 HMGN2P46Q86SG4 172 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 LY6G5BQ8NDX9 201 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 IL1F10Q8WWZ1 152 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 ODF3Q96PU9 254 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 CHAC1Q9BUX1 264 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 PRSS22Q9GZN4 317 aa5.85□□□□□ -1.47
HDAC3-216ENST00000523088 KLK5Q9Y337 293 aaPredicted RBP5.85□□□□□ -1.47
HDAC3-216ENST00000523088 FN1P02751 2386 aaKnown RBP5.85□□□□□ -1.47
HDAC3-216ENST00000523088 SYNGR2O43760 224 aa5.84□□□□□ -1.47
HDAC3-216ENST00000523088 LY6G6DO95868 133 aa5.84□□□□□ -1.47
HDAC3-216ENST00000523088 IGHV3-9P01782 118 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms