RNA–Protein interactions for RNA: ENST00000521710.1

NPM1-209, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-209ENST00000521710 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.84□□□□□ -2.27
NPM1-209ENST00000521710 APOBP04114 4563 aaKnown RBP0.84□□□□□ -2.28
NPM1-209ENST00000521710 NEBP20929 6669 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 MACF1Q9UPN3 7388 aaKnown RBP0.83□□□□□ -2.28
NPM1-209ENST00000521710 EXOC1LA0A1B0GW35 172 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 FAM92AA1XBS5 289 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 TRAPPC13A5PLN9 417 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 SMIM23A6NLE4 172 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 TMEM212A6NML5 194 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 BUB1B-PAK6H3BSN5 160 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 OR2B3O76000 313 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 RPP14O95059 124 aaKnown RBP0.83□□□□□ -2.28
NPM1-209ENST00000521710 PMP2P02689 132 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 LYNX1P0DP58 116 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 COX6A1P12074 109 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 KRTAP10-4P60372 401 aaPredicted RBP0.83□□□□□ -2.28
NPM1-209ENST00000521710 ZNF846Q147U1 533 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 RGS21Q2M5E4 152 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 NCMAPQ5T1S8 102 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 RPL22L1Q6P5R6 122 aaKnown RBP0.83□□□□□ -2.28
NPM1-209ENST00000521710 CLVS1Q8IUQ0 354 aaPredicted RBP0.83□□□□□ -2.28
NPM1-209ENST00000521710 Q8N2B8 174 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 C10orf126Q8N4M7 172 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 WFDC9Q8NEX5 89 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 PFN4Q8NHR9 129 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 RASSF5Q8WWW0 418 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 MBD3L1Q8WWY6 194 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 DCUN1D1Q96GG9 259 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 PRAP1Q96NZ9 151 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 DCSTAMPQ9H295 470 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 PRTFDC1Q9NRG1 225 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 C14orf105Q9NVL8 296 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 PRELID3BQ9Y3B1 194 aa0.83□□□□□ -2.28
NPM1-209ENST00000521710 DNAH5Q8TE73 4624 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 DNAH2Q9P225 4427 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 LRP1BQ9NZR2 4599 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 IGKV1D-42A0A075B6H8 117 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 PQLC2LA1A4F0 135 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 IGKV2-29A2NJV5 120 aaPredicted RBP0.82□□□□□ -2.28
NPM1-209ENST00000521710 DPRXA6NFQ7 191 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 CTSDP07339 412 aaPredicted RBP0.82□□□□□ -2.28
NPM1-209ENST00000521710 FKBP2P26885 142 aaKnown RBP0.82□□□□□ -2.28
NPM1-209ENST00000521710 G6PCP35575 357 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 OMPP47874 163 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 CEBPGP53567 150 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 DEFA3P59666 94 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 CDC42P60953 191 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 TFAMQ00059 246 aaKnown RBP0.82□□□□□ -2.28
NPM1-209ENST00000521710 SPOPLQ6IQ16 392 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 C22orf39Q6P5X5 142 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 Q6ZQT0 140 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 C12orf45Q8N5I9 185 aaPredicted RBP0.82□□□□□ -2.28
NPM1-209ENST00000521710 OR13C4Q8NGS5 318 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 C11orf40Q8WZ69 217 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 TMEM106AQ96A25 262 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 TOMM6Q96B49 74 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 STOML2Q9UJZ1 356 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 TMEM56-RWDD3S4R434 201 aa0.82□□□□□ -2.28
NPM1-209ENST00000521710 TCHHQ07283 1943 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 VPS13DQ5THJ4 4388 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 NINQ8N4C6 2090 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 HEATR5BQ9P2D3 2071 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 TMEM114B3SHH9 223 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 SDCBPO00560 298 aaPredicted RBP0.81□□□□□ -2.28
NPM1-209ENST00000521710 E2F6O75461 281 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 OR2J2O76002 312 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 CRYZL1O95825 349 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 CRHP06850 196 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 RPSAP08865 295 aaKnown RBP0.81□□□□□ -2.28
NPM1-209ENST00000521710 CTXN2P0C2S0 81 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 SPI1P17947 270 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 NFYAP23511 347 aaPredicted RBP0.81□□□□□ -2.28
NPM1-209ENST00000521710 TCTAP57738 103 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 ERVS71-1P61550 626 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 CDK5R1Q15078 307 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 ELOBQ15370 118 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 GRINAQ7Z429 371 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 RPS19BP1Q86WX3 136 aaKnown RBP0.81□□□□□ -2.28
NPM1-209ENST00000521710 DNAJC9Q8WXX5 260 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 ITFG2Q969R8 447 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 SCGB3A1Q96QR1 104 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 ADAT1Q9BUB4 502 aaKnown RBP0.81□□□□□ -2.28
NPM1-209ENST00000521710 COMMD5Q9GZQ3 224 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 UQCC1Q9NVA1 299 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 IDI2-AS1Q9NZ38 188 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 BOKQ9UMX3 212 aaPredicted RBP0.81□□□□□ -2.28
NPM1-209ENST00000521710 CYSLTR1Q9Y271 337 aa0.81□□□□□ -2.28
NPM1-209ENST00000521710 DOCK11Q5JSL3 2073 aa0.8□□□□□ -2.28
NPM1-209ENST00000521710 LRP1Q07954 4544 aaKnown RBP0.8□□□□□ -2.28
NPM1-209ENST00000521710 TRAV9-1A0A075B6T8 112 aa0.8□□□□□ -2.28
NPM1-209ENST00000521710 MEIKINA0A087WXM9 373 aa0.8□□□□□ -2.28
NPM1-209ENST00000521710 M0R2N4 97 aa0.8□□□□□ -2.28
NPM1-209ENST00000521710 HCRTO43612 131 aa0.8□□□□□ -2.28
NPM1-209ENST00000521710 FADS1O60427 444 aa0.8□□□□□ -2.28
NPM1-209ENST00000521710 ZNF682O95780 498 aa0.8□□□□□ -2.28
NPM1-209ENST00000521710 SMR3BP02814 79 aaPredicted RBP0.8□□□□□ -2.28
NPM1-209ENST00000521710 METTL15P1P0C7V9 234 aa0.8□□□□□ -2.28
NPM1-209ENST00000521710 CDK10Q15131 360 aa0.8□□□□□ -2.28
NPM1-209ENST00000521710 SURF2Q15527 256 aaPredicted RBP0.8□□□□□ -2.28
NPM1-209ENST00000521710 ALX1Q15699 326 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms