RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 KIR3DP1A8MWS1 328 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 ATP6V1G2-DDX39BF2Z307 99 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 ERC2-IT1O76042 136 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 ETV6P41212 452 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 KRTAP12-2P59991 146 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 IZUMO2Q6UXV1 221 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 OR5AS1Q8N127 324 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 LINC00269Q8N2A0 174 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 Q8N2B8 174 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 FAM19A2Q8N3H0 131 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 OTOSQ8NHW6 89 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 Q8TAT8 98 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 SDF2Q99470 211 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 CST11Q9H112 138 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 CHCHD2Q9Y6H1 151 aaPredicted RBP1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 FGD6Q6ZV73 1430 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 PXDNLA1KZ92 1463 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 QRICH2Q9H0J4 1663 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 MUC22E2RYF6 1773 aaPredicted RBP1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 DOCK2Q92608 1830 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 SNRNP200O75643 2136 aaKnown RBP1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 TRBV20-1A0A075B6N2 111 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 PNMA8CA0A1B0GUJ8 204 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 LOC100130705A0A1B0GUX0 176 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 C9orf170A2RU37 121 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 A6NN06 94 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 F6UZH7 168 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 CDC42EP2O14613 210 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 RBP4P02753 201 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 APODP05090 189 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 CD2P06729 351 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 CKS2P33552 79 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 GUCA1AP43080 201 aaPredicted RBP1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 PDE6HQ13956 83 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 ASB16-AS1Q495Z4 193 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 OCIAD2Q56VL3 154 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 CLECL1Q8IZS7 167 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 LYPD1Q8N2G4 141 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 C12orf57Q99622 126 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 TTTY12Q9BZ98 90 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 CCDC167Q9P0B6 97 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 SOX21Q9Y651 276 aaPredicted RBP1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 PATJQ8NI35 1801 aa1.28□□□□□ -2.2
SCARNA3-201ENST00000517097 LAMB1P07942 1786 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 LRP5O75197 1615 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 TRAV14DV4A0A0A6YYC5 116 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 IGHV1-24A0A0C4DH33 117 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 C3orf85A0A1B0GTC6 90 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 YPEL1O60688 119 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 EDF1O60869 148 aaKnown RBP1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 PYYP10082 97 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 CXCL8P10145 99 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 BRS3P32247 399 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 CCSMST1Q4G0I0 132 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 C2orf82Q6UX34 121 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 CASC2Q6XLA1 102 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 ZNF833PQ6ZTB9 187 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 ATOH7Q8N100 152 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 TCTEX1D1Q8N7M0 179 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 Q96M85 177 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 TXNDC17Q9BRA2 123 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 TCEAL7Q9BRU2 100 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 SAR1AQ9NR31 198 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 MPC1Q9Y5U8 109 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 SPTBP11277 2137 aa1.27□□□□□ -2.21
SCARNA3-201ENST00000517097 PLXNA1Q9UIW2 1896 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 MRC2Q9UBG0 1479 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 NAIPQ13075 1403 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 LOC107984156A0A0G2JMH3 177 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 SPAARA0A1B0GVQ0 90 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 BBIP1A8MTZ0 92 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 ZNF736B4DX44 427 aaPredicted RBP1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 M0R2P5 195 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 CORTO00230 105 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 FGF7P21781 194 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 MRPS10P82664 201 aaKnown RBP1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 MIR22HGQ0VDD5 57 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 MEIG1Q5JSS6 88 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 C1orf137Q5JT78 98 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 KRTAP26-1Q6PEX3 210 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 SCIMPQ6UWF3 145 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 ZCCHC23Q6ZST2 131 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 Q6ZUT4 128 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 ARL17AQ8IVW1 177 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 KCNRGQ8N5I3 272 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 DPH3Q96FX2 82 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 CIB3Q96Q77 187 aaPredicted RBP1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 PDCD10Q9BUL8 212 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 KRTAP4-3Q9BYR4 195 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 SCN3BQ9NY72 215 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 PRO0461Q9UI25 63 aa1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 AFDNP55196 1824 aaKnown RBP1.26□□□□□ -2.21
SCARNA3-201ENST00000517097 COL5A1P20908 1838 aaPredicted RBP1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 ARFGEF1Q9Y6D6 1849 aa1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 TRBV6-8A0A0A6YYG3 113 aa1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 IFITM5A6NNB3 132 aa1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 PITX3O75364 302 aa1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 CNBPP62633 177 aaKnown RBP1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 BRD3OSQ6XYD6 125 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms