RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 COMMD3Q9UBI1 195 aa-1.29□□□□□ -2.62
RNU6-1088P-201ENST00000516850 MYH9P35579 1960 aaKnown RBP-1.29□□□□□ -2.62
RNU6-1088P-201ENST00000516850 SPAG17Q6Q759 2223 aa-1.3□□□□□ -2.62
RNU6-1088P-201ENST00000516850 PDZD2O15018 2839 aa-1.3□□□□□ -2.62
RNU6-1088P-201ENST00000516850 TENM2Q9NT68 2774 aa-1.3□□□□□ -2.62
RNU6-1088P-201ENST00000516850 LSM6P62312 80 aaKnown RBP-1.3□□□□□ -2.62
RNU6-1088P-201ENST00000516850 DEFB109BQ30KR1 87 aa-1.3□□□□□ -2.62
RNU6-1088P-201ENST00000516850 OR4B1Q8NGF8 309 aa-1.3□□□□□ -2.62
RNU6-1088P-201ENST00000516850 OR8J2Q8NGG1 315 aa-1.3□□□□□ -2.62
RNU6-1088P-201ENST00000516850 PPP1R1CQ8WVI7 109 aa-1.3□□□□□ -2.62
RNU6-1088P-201ENST00000516850 GPX7Q96SL4 187 aaPredicted RBP-1.3□□□□□ -2.62
RNU6-1088P-201ENST00000516850 OR2H1Q9GZK4 316 aa-1.3□□□□□ -2.62
RNU6-1088P-201ENST00000516850 ANKRD31Q8N7Z5 1873 aa-1.31□□□□□ -2.62
RNU6-1088P-201ENST00000516850 FGD6Q6ZV73 1430 aa-1.31□□□□□ -2.62
RNU6-1088P-201ENST00000516850 VIRMAQ69YN4 1812 aaKnown RBP-1.31□□□□□ -2.62
RNU6-1088P-201ENST00000516850 POU6F1Q14863 301 aa-1.31□□□□□ -2.62
RNU6-1088P-201ENST00000516850 CCSMST1Q4G0I0 132 aa-1.31□□□□□ -2.62
RNU6-1088P-201ENST00000516850 C1orf140Q5VVS0 124 aa-1.31□□□□□ -2.62
RNU6-1088P-201ENST00000516850 LYPD5Q6UWN5 251 aa-1.31□□□□□ -2.62
RNU6-1088P-201ENST00000516850 PHF5AQ7RTV0 110 aaKnown RBP-1.31□□□□□ -2.62
RNU6-1088P-201ENST00000516850 CCL4L1Q8NHW4 92 aa-1.31□□□□□ -2.62
RNU6-1088P-201ENST00000516850 C19orf12Q9NSK7 152 aa-1.31□□□□□ -2.62
RNU6-1088P-201ENST00000516850 ZCCHC6Q5VYS8 1495 aaKnown RBP-1.31□□□□□ -2.62
RNU6-1088P-201ENST00000516850 ZNF292O60281 2723 aa-1.31□□□□□ -2.62
RNU6-1088P-201ENST00000516850 ADGBQ8N7X0 1667 aa-1.32□□□□□ -2.62
RNU6-1088P-201ENST00000516850 RIIAD1A6NNX1 92 aa-1.32□□□□□ -2.62
RNU6-1088P-201ENST00000516850 G3V2T6 193 aa-1.32□□□□□ -2.62
RNU6-1088P-201ENST00000516850 BCL2P10415 239 aa-1.32□□□□□ -2.62
RNU6-1088P-201ENST00000516850 SDC4P31431 198 aa-1.32□□□□□ -2.62
RNU6-1088P-201ENST00000516850 CPDO75976 1380 aa-1.33□□□□□ -2.62
RNU6-1088P-201ENST00000516850 BIVM-ERCC5R4GMW8 1640 aa-1.33□□□□□ -2.62
RNU6-1088P-201ENST00000516850 C1QBP02746 253 aa-1.33□□□□□ -2.62
RNU6-1088P-201ENST00000516850 PRM1P04553 51 aa-1.33□□□□□ -2.62
RNU6-1088P-201ENST00000516850 IL7P13232 177 aa-1.33□□□□□ -2.62
RNU6-1088P-201ENST00000516850 IQCJQ1A5X6 159 aa-1.33□□□□□ -2.62
RNU6-1088P-201ENST00000516850 CROCCP2Q86T23 111 aa-1.33□□□□□ -2.62
RNU6-1088P-201ENST00000516850 CLEC2BQ92478 149 aa-1.33□□□□□ -2.62
RNU6-1088P-201ENST00000516850 CFAP53Q96M91 514 aa-1.33□□□□□ -2.62
RNU6-1088P-201ENST00000516850 C9orf16Q9BUW7 83 aa-1.33□□□□□ -2.62
RNU6-1088P-201ENST00000516850 ATG5Q9H1Y0 275 aa-1.33□□□□□ -2.62
RNU6-1088P-201ENST00000516850 SERPINA1P01009 418 aa-1.34□□□□□ -2.62
RNU6-1088P-201ENST00000516850 IGKCP01834 107 aa-1.34□□□□□ -2.62
RNU6-1088P-201ENST00000516850 APODP05090 189 aa-1.34□□□□□ -2.62
RNU6-1088P-201ENST00000516850 CCKP06307 115 aa-1.34□□□□□ -2.62
RNU6-1088P-201ENST00000516850 SMIM11BQ8TCY0 68 aa-1.34□□□□□ -2.62
RNU6-1088P-201ENST00000516850 TMEM141Q96I45 108 aa-1.34□□□□□ -2.62
RNU6-1088P-201ENST00000516850 PAIP2Q9BPZ3 127 aaKnown RBP-1.34□□□□□ -2.62
RNU6-1088P-201ENST00000516850 ZFYVE9O95405 1425 aa-1.34□□□□□ -2.62
RNU6-1088P-201ENST00000516850 MYH2Q9UKX2 1941 aa-1.34□□□□□ -2.62
RNU6-1088P-201ENST00000516850 COL6A3P12111 3177 aa-1.35□□□□□ -2.62
RNU6-1088P-201ENST00000516850 TRAV12-2A0A075B6T6 113 aa-1.35□□□□□ -2.63
RNU6-1088P-201ENST00000516850 H7C1C5 153 aa-1.35□□□□□ -2.63
RNU6-1088P-201ENST00000516850 KPNA4O00629 521 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-1088P-201ENST00000516850 CYBAP13498 195 aa-1.35□□□□□ -2.63
RNU6-1088P-201ENST00000516850 LCN6P62502 163 aa-1.35□□□□□ -2.63
RNU6-1088P-201ENST00000516850 WFDC2Q14508 124 aa-1.35□□□□□ -2.63
RNU6-1088P-201ENST00000516850 RHOHQ15669 191 aa-1.35□□□□□ -2.63
RNU6-1088P-201ENST00000516850 PTRHD1Q6GMV3 140 aaKnown RBP-1.35□□□□□ -2.63
RNU6-1088P-201ENST00000516850 CYP4F30PQ9H0H9 118 aa-1.35□□□□□ -2.63
RNU6-1088P-201ENST00000516850 BET1LQ9NYM9 111 aa-1.35□□□□□ -2.63
RNU6-1088P-201ENST00000516850 GVQW2A0A096LPI5 108 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 TMEM189A5PLL7 270 aa-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 APC2O95996 2303 aa-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 SAA1P0DJI8 122 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 PYYP10082 97 aa-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 TPT1P13693 172 aaKnown RBP-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 DIRC1Q969H9 104 aa-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 PPP1R14BQ96C90 147 aa-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 PYCARDQ9ULZ3 195 aa-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 SSR3Q9UNL2 185 aa-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 MPC1Q9Y5U8 109 aa-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 SPTBN2O15020 2390 aa-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 MYH1P12882 1939 aa-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 FAT2Q9NYQ8 4349 aa-1.36□□□□□ -2.63
RNU6-1088P-201ENST00000516850 VWFP04275 2813 aa-1.37□□□□□ -2.63
RNU6-1088P-201ENST00000516850 TEX49A0A1B0GTD5 131 aa-1.37□□□□□ -2.63
RNU6-1088P-201ENST00000516850 M0R3E3 92 aa-1.37□□□□□ -2.63
RNU6-1088P-201ENST00000516850 EDF1O60869 148 aaKnown RBP-1.37□□□□□ -2.63
RNU6-1088P-201ENST00000516850 APOC1P02654 83 aa-1.37□□□□□ -2.63
RNU6-1088P-201ENST00000516850 PPP1R2P41236 205 aa-1.37□□□□□ -2.63
RNU6-1088P-201ENST00000516850 GNG5P63218 68 aa-1.37□□□□□ -2.63
RNU6-1088P-201ENST00000516850 UNQ5815/PRO19632Q6UWF5 114 aa-1.37□□□□□ -2.63
RNU6-1088P-201ENST00000516850 PBDC1Q9BVG4 233 aa-1.37□□□□□ -2.63
RNU6-1088P-201ENST00000516850 RTL8AQ9BWD3 113 aa-1.37□□□□□ -2.63
RNU6-1088P-201ENST00000516850 PPRC1Q5VV67 1664 aaKnown RBP-1.38□□□□□ -2.63
RNU6-1088P-201ENST00000516850 TRAV17A0A0B4J275 112 aa-1.38□□□□□ -2.63
RNU6-1088P-201ENST00000516850 IFITM5A6NNB3 132 aa-1.38□□□□□ -2.63
RNU6-1088P-201ENST00000516850 H3BQV1 296 aa-1.38□□□□□ -2.63
RNU6-1088P-201ENST00000516850 CDC42EP2O14613 210 aa-1.38□□□□□ -2.63
RNU6-1088P-201ENST00000516850 CST2P09228 141 aa-1.38□□□□□ -2.63
RNU6-1088P-201ENST00000516850 CCL7P80098 99 aa-1.38□□□□□ -2.63
RNU6-1088P-201ENST00000516850 RTL8BQ17RB0 113 aa-1.38□□□□□ -2.63
RNU6-1088P-201ENST00000516850 AKR1C8PQ5T2L2 129 aa-1.38□□□□□ -2.63
RNU6-1088P-201ENST00000516850 OR5H6Q8NGV6 325 aa-1.38□□□□□ -2.63
RNU6-1088P-201ENST00000516850 PRNDQ9UKY0 176 aa-1.38□□□□□ -2.63
RNU6-1088P-201ENST00000516850 SLC22A13Q9Y226 551 aa-1.38□□□□□ -2.63
RNU6-1088P-201ENST00000516850 ARL2BPQ9Y2Y0 163 aa-1.38□□□□□ -2.63
RNU6-1088P-201ENST00000516850 MAP1BP46821 2468 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1088P-201ENST00000516850 DOCK11Q5JSL3 2073 aa-1.39□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms