RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 ERCC8Q13216 396 aa6.9□□□□□ -1.3
SNF8-211ENST00000512243 ZNF767PQ75MW2 155 aa6.9□□□□□ -1.3
SNF8-211ENST00000512243 CYB561D1Q8N8Q1 229 aa6.9□□□□□ -1.3
SNF8-211ENST00000512243 ATG101Q9BSB4 218 aa6.9□□□□□ -1.3
SNF8-211ENST00000512243 CSTL1Q9H114 145 aa6.9□□□□□ -1.3
SNF8-211ENST00000512243 NBEAL2Q6ZNJ1 2754 aa6.9□□□□□ -1.31
SNF8-211ENST00000512243 AMBPP02760 352 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 TCRAP04437 139 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 TSPOP30536 169 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 LEPP41159 167 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 AKR1C3P42330 323 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 FXYD7P58549 80 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 RAB14P61106 215 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 PMS2P11Q13670 270 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 HAGHQ16775 308 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 LINC00322Q6ZN03 302 aaPredicted RBP6.89□□□□□ -1.31
SNF8-211ENST00000512243 C9orf47Q6ZRZ4 202 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 LYPD6BQ8NI32 183 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 PCNPQ8WW12 178 aaKnown RBP6.89□□□□□ -1.31
SNF8-211ENST00000512243 HIST1H2BAQ96A08 127 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 LINC00477Q96M19 166 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 ODF3Q96PU9 254 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 VGLL1Q99990 258 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 B9D2Q9BPU9 175 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 TXNDC17Q9BRA2 123 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 C1QTNF4Q9BXJ3 329 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 EPDR1Q9UM22 224 aa6.89□□□□□ -1.31
SNF8-211ENST00000512243 HUWE1Q7Z6Z7 4374 aaKnown RBP6.88□□□□□ -1.31
SNF8-211ENST00000512243 LOC102723971A0A1B0GUV8 181 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 M0R2Z0 102 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 NMBP08949 121 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 CT45A10P0DMU9 189 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 ZNF138P52744 262 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 SPINK13Q1W4C9 94 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 AMTNQ6UX39 209 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 CCDC28AQ8IWP9 274 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 TMEM75Q8N9X5 138 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 Q8TAT8 98 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 ASCL2Q99929 193 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 NDFIP1Q9BT67 221 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 AGPAT4-IT1Q9H0P7 198 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 SLC35B3Q9H1N7 401 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 XCL2Q9UBD3 114 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 VAX2Q9UIW0 290 aa6.88□□□□□ -1.31
SNF8-211ENST00000512243 TRAV8-1A0A0A6YYK1 113 aa6.87□□□□□ -1.31
SNF8-211ENST00000512243 FBLL1A6NHQ2 334 aaKnown RBP6.87□□□□□ -1.31
SNF8-211ENST00000512243 PDE6DO43924 150 aa6.87□□□□□ -1.31
SNF8-211ENST00000512243 INSP01308 110 aa6.87□□□□□ -1.31
SNF8-211ENST00000512243 CDKN1BP46527 198 aa6.87□□□□□ -1.31
SNF8-211ENST00000512243 UBE2G1P62253 170 aa6.87□□□□□ -1.31
SNF8-211ENST00000512243 IFITM2Q01629 132 aa6.87□□□□□ -1.31
SNF8-211ENST00000512243 MEF2BQ02080 365 aaPredicted RBP6.87□□□□□ -1.31
SNF8-211ENST00000512243 DEFB135Q30KP9 77 aa6.87□□□□□ -1.31
SNF8-211ENST00000512243 SBSPONQ8IVN8 264 aa6.87□□□□□ -1.31
SNF8-211ENST00000512243 RCHY1Q96PM5 261 aa6.87□□□□□ -1.31
SNF8-211ENST00000512243 ZNF492Q9P255 531 aa6.87□□□□□ -1.31
SNF8-211ENST00000512243 LENEPQ9Y5L5 61 aa6.87□□□□□ -1.31
SNF8-211ENST00000512243 COL7A1Q02388 2944 aa6.87□□□□□ -1.31
SNF8-211ENST00000512243 TRAV34A0A0B4J273 112 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 TRBV7-9A0A0J9YWB2 115 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 RBFOX3A6NFN3 312 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 J3KRW8 73 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 GIG44P09565 113 aaPredicted RBP6.86□□□□□ -1.31
SNF8-211ENST00000512243 FLI1Q01543 452 aaPredicted RBP6.86□□□□□ -1.31
SNF8-211ENST00000512243 ZNF506Q5JVG8 444 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 Q6ZWC4 215 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 PRNTQ86SH4 94 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 Q86TA4 180 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 C11orf52Q96A22 123 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 FMC1Q96HJ9 113 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 IGF2BP2-AS1Q96M15 143 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 FAM210AQ96ND0 272 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 EIF5A2Q9GZV4 153 aaKnown RBP6.86□□□□□ -1.31
SNF8-211ENST00000512243 PSG8Q9UQ74 426 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 GOLT1BQ9Y3E0 138 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 TENM3Q9P273 2699 aa6.86□□□□□ -1.31
SNF8-211ENST00000512243 TRAV12-2A0A075B6T6 113 aa6.85□□□□□ -1.31
SNF8-211ENST00000512243 S100A9P06702 114 aaKnown RBP6.85□□□□□ -1.31
SNF8-211ENST00000512243 CRISP2P16562 243 aa6.85□□□□□ -1.31
SNF8-211ENST00000512243 CLLU1Q5K131 121 aa6.85□□□□□ -1.31
SNF8-211ENST00000512243 C2CD4CQ8TF44 421 aa6.85□□□□□ -1.31
SNF8-211ENST00000512243 FAM19A4Q96LR4 140 aa6.85□□□□□ -1.31
SNF8-211ENST00000512243 SGK494Q96LW2 274 aa6.85□□□□□ -1.31
SNF8-211ENST00000512243 RARRES2Q99969 163 aa6.85□□□□□ -1.31
SNF8-211ENST00000512243 TM2D3Q9BRN9 247 aa6.85□□□□□ -1.31
SNF8-211ENST00000512243 RETNQ9HD89 108 aa6.85□□□□□ -1.31
SNF8-211ENST00000512243 TP53TG1Q9Y2A0 90 aa6.85□□□□□ -1.31
SNF8-211ENST00000512243 C7orf71A4D174 169 aa6.84□□□□□ -1.31
SNF8-211ENST00000512243 KLLNB2CW77 178 aa6.84□□□□□ -1.31
SNF8-211ENST00000512243 CRXO43186 299 aaPredicted RBP6.84□□□□□ -1.31
SNF8-211ENST00000512243 SPRY2O43597 315 aa6.84□□□□□ -1.31
SNF8-211ENST00000512243 IGLV2-11P01706 119 aa6.84□□□□□ -1.31
SNF8-211ENST00000512243 GPX1P07203 203 aa6.84□□□□□ -1.31
SNF8-211ENST00000512243 NHLRC4P0CG21 123 aaPredicted RBP6.84□□□□□ -1.31
SNF8-211ENST00000512243 BTN1A1Q13410 526 aa6.84□□□□□ -1.31
SNF8-211ENST00000512243 TMEM183BQ1AE95 376 aa6.84□□□□□ -1.31
SNF8-211ENST00000512243 GFI1BQ5VTD9 330 aa6.84□□□□□ -1.31
SNF8-211ENST00000512243 ZFAND2AQ8N6M9 145 aa6.84□□□□□ -1.31
SNF8-211ENST00000512243 RNF183Q96D59 192 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms