RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 ZNF329Q86UD4 541 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 RHPN1-AS1Q9BWJ2 59 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 SPRY4Q9C004 299 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 TRAV8-4A0A0B4J246 113 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 ZNF561-AS1K7EIQ3 104 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 HIST1H2BKO60814 126 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 HIST1H2BJP06899 126 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 HIST1H2BOP23527 126 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 HIST1H2BBP33778 126 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 HIST1H2BDP58876 126 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 HIST1H2BCP62807 126 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 HIST2H2BEQ16778 126 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.93□□□□□ -1.78
PTPN13-209ENST00000511467 CD177Q8N6Q3 437 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 HIST1H2BHQ93079 126 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 TIMM17AQ99595 171 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 HIST1H2BNQ99877 126 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 HIST1H2BMQ99879 126 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 PMS2P5A8MQ11 134 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 CSN3P07498 182 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 CBLN1P23435 193 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 CTRLP40313 264 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 PRSS33Q8NF86 280 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 NUP35Q8NFH5 326 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 MRPL36Q9P0J6 103 aaKnown RBP3.93□□□□□ -1.78
PTPN13-209ENST00000511467 TRAV8-1A0A0A6YYK1 113 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 LOC389332A0A1B0GUA5 103 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 A0A1B0GW54 56 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 DAD1P61803 113 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 PRR25Q96S07 402 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 UBL5Q9BZL1 73 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 LTAP01374 205 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 IGKV1-5P01602 117 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 COX17Q14061 63 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 RPP25LQ8N5L8 163 aaKnown RBP3.93□□□□□ -1.78
PTPN13-209ENST00000511467 LINC00482Q8N8I6 264 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 TMEM263Q8WUH6 116 aaKnown RBP3.93□□□□□ -1.78
PTPN13-209ENST00000511467 LINC00474Q9P2X8 69 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 IGF1P05019 195 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 C6orf226Q5I0X4 101 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 ZFAND6Q6FIF0 208 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 GATD1Q8NB37 220 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 CELA3BP08861 270 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 Q0VFX4 171 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 ZNF479Q96JC4 524 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 A0A1B0GX51 115 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 RBMY1FQ15415 496 aaKnown RBP3.92□□□□□ -1.78
PTPN13-209ENST00000511467 GUSBP1Q15486 140 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 MIR17HGQ75NE6 70 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 DSCR8Q96T75 97 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 CST9LQ9H4G1 147 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 SPCS1Q9Y6A9 102 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 H3BVH4 76 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 FUSP35637 526 aaKnown RBP eCLIP3.92□□□□□ -1.78
PTPN13-209ENST00000511467 EBI3Q14213 229 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 C8orf86Q6ZUL3 223 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 C15orf53Q8NAA6 179 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 PTH2Q96A98 100 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 PRORYQ9H606 182 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 IGKV1D-13A0A0B4J2D9 117 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 PSCAO43653 123 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 TIMM17BO60830 172 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 IGKV1-13P0DP09 117 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 FAM74A4Q5TZK3 123 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 PGPEP1Q9NXJ5 209 aa3.92□□□□□ -1.78
PTPN13-209ENST00000511467 IGKV1-27A0A075B6S5 117 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 SHISA3A0PJX4 238 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 TSPAN13O95857 204 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 TFF3Q07654 80 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 C17orf58Q2M2W7 97 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 SPINK9Q5DT21 86 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 LINC01561Q8N1V8 128 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 OCC1Q8TAD7 63 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 IGF2BP2-AS1Q96M15 143 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 ZNF876PQ49A33 203 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 SPATA12Q7Z6I5 190 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 IGLV11-55A0A075B6I3 123 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 SOCS3O14543 225 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 NKAPP1Q8N9T2 125 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 CR1P17927 2039 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 C10orf142B7Z368 130 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 IGLC1P0CG04 106 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 SP5Q6BEB4 398 aaPredicted RBP3.91□□□□□ -1.78
PTPN13-209ENST00000511467 SLC25A29Q8N8R3 303 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 SIGLEC8Q9NYZ4 499 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 TRAV8-3A0A0A6YYJ7 113 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 CCL24O00175 119 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 ESDP10768 282 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 HOXB4P17483 251 aaPredicted RBP3.91□□□□□ -1.78
PTPN13-209ENST00000511467 TCTEX1D4Q5JR98 221 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 PIFOQ8TCI5 191 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 SIGMAR1Q99720 223 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 SPATA25Q9BR10 227 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 TRBV7-3A0A075B6L6 115 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 IGKV1-12A0A0C4DH73 117 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 IGKV1D-12P01611 117 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 CELA3AP09093 270 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 CCL18P55774 89 aa3.91□□□□□ -1.78
PTPN13-209ENST00000511467 EIF4EBP1Q13541 118 aaPredicted RBP3.91□□□□□ -1.78
PTPN13-209ENST00000511467 BATF2Q8N1L9 274 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms