RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 TSPOP30536 169 aa6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 ZNF80P51504 273 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 SUMO1P63165 101 aaKnown RBP6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 GOLT1AQ6ZVE7 132 aa6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 ZNF575Q86XF7 245 aa6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 IQCF2Q8IXL9 164 aa6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 C8orf49Q96NF6 230 aa6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 KMT2AQ03164 3969 aa6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 TRAV1-1A0A0B4J248 108 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 SLC25A5P05141 298 aaKnown RBP6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 H2AFB1P0C5Y9 115 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 DEFB130BP0DP73 79 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 DEFB130AP0DP74 79 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 CDKN1BP46527 198 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 TAS2R60P59551 318 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 IFITM2Q01629 132 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 DPPA3Q6W0C5 159 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 TMEM256Q8N2U0 113 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 C5orf17Q8NAS9 161 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 LYPD6BQ8NI32 183 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 ODF3Q96PU9 254 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 AAMDCQ9H7C9 122 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 TMEM167BQ9NRX6 74 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 C11orf21Q9P2W6 132 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 EPDR1Q9UM22 224 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 DNAH6Q9C0G6 4158 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 DNAH10Q8IVF4 4471 aa6.22□□□□□ -1.41
PDLIM5-213ENST00000509357 TRAV12-3A0A0B4J271 114 aa6.21□□□□□ -1.42
PDLIM5-213ENST00000509357 SCO2A0A1W2PP80 73 aa6.21□□□□□ -1.42
PDLIM5-213ENST00000509357 RBAKDNA6NC62 111 aa6.21□□□□□ -1.42
PDLIM5-213ENST00000509357 F6UZH7 168 aa6.21□□□□□ -1.42
PDLIM5-213ENST00000509357 P0DMU3 169 aa6.21□□□□□ -1.42
PDLIM5-213ENST00000509357 FAM231AP0DMU4 169 aa6.21□□□□□ -1.42
PDLIM5-213ENST00000509357 FAM231CP0DMU5 169 aa6.21□□□□□ -1.42
PDLIM5-213ENST00000509357 LEPP41159 167 aa6.21□□□□□ -1.42
PDLIM5-213ENST00000509357 ZNF138P52744 262 aa6.21□□□□□ -1.42
PDLIM5-213ENST00000509357 EIF5AP63241 154 aaKnown RBP6.21□□□□□ -1.42
PDLIM5-213ENST00000509357 UBE2DNLQ8IWF7 75 aa6.21□□□□□ -1.42
PDLIM5-213ENST00000509357 TP53TG3Q9ULZ0 132 aa6.21□□□□□ -1.42
PDLIM5-213ENST00000509357 LYRM9A8MSI8 78 aa6.2□□□□□ -1.42
PDLIM5-213ENST00000509357 TEX46H3BTG2 121 aa6.2□□□□□ -1.42
PDLIM5-213ENST00000509357 H7BYZ3 331 aa6.2□□□□□ -1.42
PDLIM5-213ENST00000509357 PEX7O00628 323 aa6.2□□□□□ -1.42
PDLIM5-213ENST00000509357 CRIP1P50238 77 aa6.2□□□□□ -1.42
PDLIM5-213ENST00000509357 RAB5CP51148 216 aa6.2□□□□□ -1.42
PDLIM5-213ENST00000509357 TEX261Q6UWH6 196 aa6.2□□□□□ -1.42
PDLIM5-213ENST00000509357 TMEM75Q8N9X5 138 aa6.2□□□□□ -1.42
PDLIM5-213ENST00000509357 C16orf74Q96GX8 76 aa6.2□□□□□ -1.42
PDLIM5-213ENST00000509357 LINC00477Q96M19 166 aa6.2□□□□□ -1.42
PDLIM5-213ENST00000509357 DERL1Q9BUN8 251 aa6.2□□□□□ -1.42
PDLIM5-213ENST00000509357 PSG8Q9UQ74 426 aa6.2□□□□□ -1.42
PDLIM5-213ENST00000509357 MUC4Q99102 2169 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 C7orf71A4D174 169 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 RNASE4P34096 147 aaKnown RBP6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 TMEM78Q5T7P6 136 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 TMEM88Q6PEY1 159 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 ZNF493Q6ZR52 646 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 Q86TA4 180 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 ARL6IP6Q8N6S5 226 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 CYB561D1Q8N8Q1 229 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 C11orf72Q8NBR9 251 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 ZNF680Q8NEM1 530 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 RNASE8Q8TDE3 154 aaKnown RBP6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 RXFP4Q8TDU9 374 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 FAM210BQ96KR6 192 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 C20orf144Q9BQM9 153 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 ATG101Q9BSB4 218 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 NOP10Q9NPE3 64 aaKnown RBP6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 GNG13Q9P2W3 67 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 TIMM8BQ9Y5J9 83 aaPredicted RBP6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 ARL2-SNX15V9GYD0 113 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 NACAE9PAV3 2078 aa6.19□□□□□ -1.42
PDLIM5-213ENST00000509357 TRBV20OR9-2A0A075B6H5 130 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 SNURFLB1AK76 121 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 C9JQL5 133 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 F5H768 121 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 IGLV2-8P01709 118 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 ATP5G1P05496 136 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 NMBP08949 121 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 CSN1S1P47710 185 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 FLI1Q01543 452 aaPredicted RBP6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 CST9LP1Q5W188 147 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 Q6AWC8 147 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 PRNTQ86SH4 94 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 POM121L12Q8N7R1 296 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 CMTM2Q8TAZ6 248 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 TMEM263Q8WUH6 116 aaKnown RBP6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 C11orf52Q96A22 123 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 KLF12Q9Y4X4 402 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 DNAH2Q9P225 4427 aa6.18□□□□□ -1.42
PDLIM5-213ENST00000509357 TRBV7-9A0A0J9YWB2 115 aa6.17□□□□□ -1.42
PDLIM5-213ENST00000509357 CBY3A6NI87 242 aa6.17□□□□□ -1.42
PDLIM5-213ENST00000509357 M0R2N4 97 aa6.17□□□□□ -1.42
PDLIM5-213ENST00000509357 GPX1P07203 203 aa6.17□□□□□ -1.42
PDLIM5-213ENST00000509357 BCL2P10415 239 aa6.17□□□□□ -1.42
PDLIM5-213ENST00000509357 SRSF3P84103 164 aaKnown RBP6.17□□□□□ -1.42
PDLIM5-213ENST00000509357 MUC21Q5SSG8 566 aa6.17□□□□□ -1.42
PDLIM5-213ENST00000509357 EIF5AL1Q6IS14 154 aaKnown RBP6.17□□□□□ -1.42
PDLIM5-213ENST00000509357 NHLRC2Q8NBF2 726 aa6.17□□□□□ -1.42
PDLIM5-213ENST00000509357 ZC2HC1AQ96GY0 325 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms