RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CELSR2Q9HCU4 2923 aa3.56□□□□□ -1.84
PDLIM5-211ENST00000508531 ARID1AO14497 2285 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 MPDZO75970 2070 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 TRBV25-1A0A075B6N4 114 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 IGKV1-12A0A0C4DH73 117 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 MYMXA0A1B0GTQ4 84 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 DUX1O43812 170 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 CEACAM4O75871 244 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 NPYP01303 97 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 IGKV1D-12P01611 117 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 IGKCP01834 107 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 ORM1P02763 201 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 RPL13AP40429 203 aaKnown RBP3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 FXYD2P54710 66 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 CACNG7P62955 275 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 TNFAIP6P98066 277 aaPredicted RBP3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 ZNF766Q5HY98 468 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 MIC13Q5XKP0 118 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 ZNF493Q6ZR52 646 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 RPS19BP1Q86WX3 136 aaKnown RBP3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 KIR3DL3Q8N743 410 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 NFAM1Q8NET5 270 aaPredicted RBP3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 OR8A1Q8NGG7 326 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 OR4C13Q8NGP0 309 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 ZNF488Q96MN9 340 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 C17orf77Q96MU5 243 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 ZNF714Q96N38 554 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 NABP2Q9BQ15 211 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 PRADC1Q9BSG0 188 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 NXT2Q9NPJ8 142 aaKnown RBP3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 DEC1Q9P2X7 70 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 MYOFQ9NZM1 2061 aa3.55□□□□□ -1.84
PDLIM5-211ENST00000508531 CACNA1CQ13936 2221 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 MED13LQ71F56 2210 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 IGKV1-27A0A075B6S5 117 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 IGKV1D-43A0A0B4J1Z2 117 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 TRAV8-2A0A0B4J237 113 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 TRAV8-4A0A0B4J246 113 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 IGKV1-6A0A0C4DH72 117 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 TRBV7-7A0A0K0K1E9 115 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 A0A1W2PQF6 199 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 TMEM30CPA0ZSE6 113 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 C9JAW5 83 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 PRSS46E5RG02 174 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 K7EMI3 77 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 M0R2P5 195 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 NPFFO15130 113 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 DUSP14O95147 198 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 NDUFA7O95182 113 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 NCR2O95944 276 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 CLPSP04118 112 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 CSN3P07498 182 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 CISD3P0C7P0 127 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 SPTBP11277 2137 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 DUTP33316 252 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 ATP5J2P56134 94 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 UBE2D3P61077 147 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 TMEM258P61165 79 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 UBE2D2P62837 147 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 ZNF77Q15935 545 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 POM121L1PQ3SYA9 428 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 ZC2HC1BQ5TFG8 222 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 FAM159AQ6UWV7 190 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 Q71RC1 249 aaPredicted RBP3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 C10orf126Q8N4M7 172 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 SLC37A2Q8TED4 501 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 TSACCQ96A04 125 aaPredicted RBP3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 EMC6Q9BV81 110 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 PRNDQ9UKY0 176 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 HIGD1AQ9Y241 93 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 SMAD5-AS1Q9Y6J3 95 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 U3KQK5 164 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 TLN1Q9Y490 2541 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 DOCK11Q5JSL3 2073 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 LRRK1Q38SD2 2015 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 SPG11Q96JI7 2443 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 ADGRG4Q8IZF6 3080 aa3.54□□□□□ -1.84
PDLIM5-211ENST00000508531 NF1P21359 2839 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 IGKV3D-11A0A0A0MRZ8 115 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 TRAV2A0A0B4J234 112 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 C19orf71A6NCJ1 209 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 LINC01546A6NGU7 62 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 SRRM4A7MD48 611 aaKnown RBP3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 CCDC179H3BU77 68 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 LTAP01374 205 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 FRMD6-AS1P0C7T7 363 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 PRTN3P24158 256 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 HLA-DMBP28068 263 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 CDAP32320 146 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 HSPE1P61604 102 aaKnown RBP3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 PLGLAQ15195 96 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 SPRNQ5BIV9 151 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 TMEM170BQ5T4T1 132 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 C9orf153Q5TBE3 101 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 GDF5OSQ5U4N7 250 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 HIST2H2BDQ6DRA6 164 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 C3orf22Q8N5N4 141 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 C15orf53Q8NAA6 179 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 COPS9Q8WXC6 57 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 MMABQ96EY8 250 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms