RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 CBY3A6NI87 242 aa11.35□□□□□ -0.59
LMNA-222ENST00000508500 NPIPB6E9PJ23 425 aa11.35□□□□□ -0.59
LMNA-222ENST00000508500 H7BYZ3 331 aa11.35□□□□□ -0.59
LMNA-222ENST00000508500 ATP6V1G1O75348 118 aa11.35□□□□□ -0.59
LMNA-222ENST00000508500 NDUFB4O95168 129 aa11.35□□□□□ -0.59
LMNA-222ENST00000508500 CXorf1O96002 111 aa11.35□□□□□ -0.59
LMNA-222ENST00000508500 PEA15Q15121 130 aa11.35□□□□□ -0.59
LMNA-222ENST00000508500 GCSAMLQ5JQS6 135 aa11.35□□□□□ -0.59
LMNA-222ENST00000508500 TMEM263Q8WUH6 116 aaKnown RBP11.35□□□□□ -0.59
LMNA-222ENST00000508500 C20orf144Q9BQM9 153 aa11.35□□□□□ -0.59
LMNA-222ENST00000508500 TXNDC17Q9BRA2 123 aa11.35□□□□□ -0.59
LMNA-222ENST00000508500 TIMM8BQ9Y5J9 83 aaPredicted RBP11.35□□□□□ -0.59
LMNA-222ENST00000508500 ARL2-SNX15V9GYD0 113 aa11.35□□□□□ -0.59
LMNA-222ENST00000508500 M0R3E3 92 aa11.34□□□□□ -0.59
LMNA-222ENST00000508500 ATP5G1P05496 136 aa11.34□□□□□ -0.59
LMNA-222ENST00000508500 ATP5G3P48201 142 aa11.34□□□□□ -0.59
LMNA-222ENST00000508500 KHDC3LQ587J8 217 aa11.34□□□□□ -0.59
LMNA-222ENST00000508500 ZNF493Q6ZR52 646 aa11.34□□□□□ -0.59
LMNA-222ENST00000508500 LINC00612Q8N6U2 182 aa11.34□□□□□ -0.59
LMNA-222ENST00000508500 OR10J6PQ8NGY7 276 aa11.34□□□□□ -0.59
LMNA-222ENST00000508500 MANBALQ9NQG1 85 aa11.34□□□□□ -0.59
LMNA-222ENST00000508500 TRBV19A0A075B6N1 114 aa11.33□□□□□ -0.6
LMNA-222ENST00000508500 J3KRW8 73 aa11.33□□□□□ -0.6
LMNA-222ENST00000508500 ZNF253O75346 499 aa11.33□□□□□ -0.6
LMNA-222ENST00000508500 MED14OSP0DP75 135 aa11.33□□□□□ -0.6
LMNA-222ENST00000508500 PYYP10082 97 aa11.33□□□□□ -0.6
LMNA-222ENST00000508500 GUK1Q16774 197 aa11.33□□□□□ -0.6
LMNA-222ENST00000508500 SUN5Q8TC36 379 aa11.33□□□□□ -0.6
LMNA-222ENST00000508500 TMEM14CQ9P0S9 112 aa11.33□□□□□ -0.6
LMNA-222ENST00000508500 TRAV12-3A0A0B4J271 114 aa11.32□□□□□ -0.6
LMNA-222ENST00000508500 RBFOX3A6NFN3 312 aa11.32□□□□□ -0.6
LMNA-222ENST00000508500 KRBOX1C9JBD0 128 aa11.32□□□□□ -0.6
LMNA-222ENST00000508500 ERCC8Q13216 396 aa11.32□□□□□ -0.6
LMNA-222ENST00000508500 ZNF506Q5JVG8 444 aa11.32□□□□□ -0.6
LMNA-222ENST00000508500 SSX7Q7RTT5 188 aa11.32□□□□□ -0.6
LMNA-222ENST00000508500 ZNRF2Q8NHG8 242 aa11.32□□□□□ -0.6
LMNA-222ENST00000508500 FAM167A-AS1Q96KT0 104 aa11.32□□□□□ -0.6
LMNA-222ENST00000508500 FAM19A4Q96LR4 140 aa11.32□□□□□ -0.6
LMNA-222ENST00000508500 ODF3Q96PU9 254 aa11.32□□□□□ -0.6
LMNA-222ENST00000508500 SLC25A2Q9BXI2 301 aa11.32□□□□□ -0.6
LMNA-222ENST00000508500 TMEM167BQ9NRX6 74 aa11.32□□□□□ -0.6
LMNA-222ENST00000508500 NUDT3O95989 172 aa11.31□□□□□ -0.6
LMNA-222ENST00000508500 HIST1H1EP10412 219 aaKnown RBP11.31□□□□□ -0.6
LMNA-222ENST00000508500 HOXA5P20719 270 aa11.31□□□□□ -0.6
LMNA-222ENST00000508500 EXOC3-AS1Q8N2X6 119 aa11.31□□□□□ -0.6
LMNA-222ENST00000508500 LINC00588Q9Y4M8 146 aa11.31□□□□□ -0.6
LMNA-222ENST00000508500 BCL2P10415 239 aa11.3□□□□□ -0.6
LMNA-222ENST00000508500 CCL20P78556 96 aa11.3□□□□□ -0.6
LMNA-222ENST00000508500 MIR17HGQ75NE6 70 aa11.3□□□□□ -0.6
LMNA-222ENST00000508500 MRPL53Q96EL3 112 aaKnown RBP11.3□□□□□ -0.6
LMNA-222ENST00000508500 EIF5A2Q9GZV4 153 aaKnown RBP11.3□□□□□ -0.6
LMNA-222ENST00000508500 AGPAT4-IT1Q9H0P7 198 aa11.3□□□□□ -0.6
LMNA-222ENST00000508500 VAX2Q9UIW0 290 aa11.3□□□□□ -0.6
LMNA-222ENST00000508500 ARL14EPLP0DKL9 152 aa11.29□□□□□ -0.6
LMNA-222ENST00000508500 GCHFRP30047 84 aa11.29□□□□□ -0.6
LMNA-222ENST00000508500 LEPP41159 167 aa11.29□□□□□ -0.6
LMNA-222ENST00000508500 FAM3BP58499 235 aaPredicted RBP11.29□□□□□ -0.6
LMNA-222ENST00000508500 BLNKQ8WV28 456 aa11.29□□□□□ -0.6
LMNA-222ENST00000508500 ATG101Q9BSB4 218 aa11.29□□□□□ -0.6
LMNA-222ENST00000508500 KRTAP4-5Q9BYR2 181 aa11.29□□□□□ -0.6
LMNA-222ENST00000508500 NKX6-2Q9C056 277 aaPredicted RBP11.29□□□□□ -0.6
LMNA-222ENST00000508500 GAGE12BA1L429 117 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 KLLNB2CW77 178 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 ZNF324O75467 553 aaPredicted RBP11.28□□□□□ -0.6
LMNA-222ENST00000508500 GAGE7O76087 117 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 GAGE12FP0CL80 117 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 GAGE12GP0CL81 117 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 GAGE12IP0CL82 117 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 FGF8P55075 233 aaPredicted RBP11.28□□□□□ -0.6
LMNA-222ENST00000508500 PDE6HQ13956 83 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 TOR2AQ5JU69 321 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 C1orf134Q5TEV5 83 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 Q6ZQT7 251 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 CCDC28AQ8IWP9 274 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 C11orf72Q8NBR9 251 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 PYGO2Q9BRQ0 406 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 TREM1Q9NP99 234 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 GNG13Q9P2W3 67 aa11.28□□□□□ -0.6
LMNA-222ENST00000508500 NBDYA0A0U1RRE5 68 aa11.27□□□□□ -0.61
LMNA-222ENST00000508500 TMEM218A2RU14 115 aa11.27□□□□□ -0.61
LMNA-222ENST00000508500 SLC25A5P05141 298 aaKnown RBP11.27□□□□□ -0.61
LMNA-222ENST00000508500 BTN1A1Q13410 526 aa11.27□□□□□ -0.61
LMNA-222ENST00000508500 OR5I1Q13606 314 aa11.27□□□□□ -0.61
LMNA-222ENST00000508500 ICAM4Q14773 271 aa11.27□□□□□ -0.61
LMNA-222ENST00000508500 PRR9Q5T870 116 aa11.27□□□□□ -0.61
LMNA-222ENST00000508500 Q6ZTI0 123 aa11.27□□□□□ -0.61
LMNA-222ENST00000508500 OR51M1Q9H341 326 aa11.27□□□□□ -0.61
LMNA-222ENST00000508500 PRELID1Q9Y255 219 aa11.27□□□□□ -0.61
LMNA-222ENST00000508500 ABCA13Q86UQ4 5058 aa11.27□□□□□ -0.61
LMNA-222ENST00000508500 LRP1BQ9NZR2 4599 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 TRAV26-1A0A087WT03 109 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 IGKV2-40A0A087WW87 121 aaPredicted RBP11.26□□□□□ -0.61
LMNA-222ENST00000508500 A0A1B0GV50 99 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 A0A1W2PRE2 83 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 C7orf71A4D174 169 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 TMEM250H0YL14 139 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 HMGB3O15347 200 aaKnown RBP11.26□□□□□ -0.61
LMNA-222ENST00000508500 OR7C2O60412 319 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 IGKV2D-40P01614 121 aaPredicted RBP11.26□□□□□ -0.61
LMNA-222ENST00000508500 MEF2BQ02080 365 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms