RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 YPEL1O60688 119 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 MRPS14O60783 128 aaKnown RBP1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 KLF7O75840 302 aaPredicted RBP1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 NDUFB2O95178 105 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 NAPSAO96009 420 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 HRASP01112 189 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 HLA-DQB1P01920 261 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 APOC2P02655 101 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 PMP2P02689 132 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 MT-ND6P03923 174 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 PYYP10082 97 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 RPL22P35268 128 aaKnown RBP1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 DCDP81605 110 aaKnown RBP1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 AKR1C1Q04828 323 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 CATR1Q13166 79 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 KLRD1Q13241 179 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 HMGN3Q15651 99 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 ORMDL2Q53FV1 153 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 Q56UQ5 140 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 LHFPL1Q86WI0 220 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 ZNF664Q8N3J9 261 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 ZIC4Q8N9L1 334 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 OR4B1Q8NGF8 309 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 OR5H2Q8NGV7 314 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 CIRBP-AS1Q8TBR5 109 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 BRK1Q8WUW1 75 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 FXYD5Q96DB9 178 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 LINC00052Q96N35 136 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 TMEM243Q9BU79 118 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 TPRKBQ9Y3C4 175 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 CDK5RAP2Q96SN8 1893 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 NBEAQ8NFP9 2946 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.85□□□□□ -2.113e-7■■■□□ 15.7
UBE2D3-225ENST00000508476 MYH7P12883 1935 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 TENM4Q6N022 2769 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 SDK2Q58EX2 2172 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 HIVEP3Q5T1R4 2406 aa1.85□□□□□ -2.11
UBE2D3-225ENST00000508476 SIP14410 1827 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 ECM29Q5VYK3 1845 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 ANKHD1Q8IWZ3 2542 aaKnown RBP1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 COL12A1Q99715 3063 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 C3orf85A0A1B0GTC6 90 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 FAM24AA6NFZ4 105 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 NDUFC2-KCTD14E9PQ53 114 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 COX7A2LO14548 114 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 GEMIN2O14893 280 aaKnown RBP1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 TRACP01848 142 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 GYPAP02724 150 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 APCSP02743 223 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 CTSDP07339 412 aaPredicted RBP1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 SRP19P09132 144 aaKnown RBP1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 SEC11BP0C7V7 166 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 HLA-DRB4P13762 266 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 HIST1H2BOP23527 126 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 FKBP2P26885 142 aaKnown RBP1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 HIST1H2BBP33778 126 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 SNCAP37840 140 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 FOXA3P55318 350 aaPredicted RBP1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 HIST1H2BDP58876 126 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 YPEL3P61236 119 aaPredicted RBP1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 HIST1H2BCP62807 126 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 RPL23P62829 140 aaKnown RBP1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 ZNF90Q03938 601 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 PDGFRLQ15198 375 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 ELOCQ15369 112 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 HIST2H2BEQ16778 126 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 C9orf153Q5TBE3 101 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 LCA10Q71F78 164 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 SCXQ7RTU7 201 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 RPS19BP1Q86WX3 136 aaKnown RBP1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 DEFB124Q8NES8 71 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 OR10P1Q8NGE3 313 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 OR4X2Q8NGF9 303 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 OR8D4Q8NGM9 314 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 OR1J4Q8NGS1 313 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 LINC01560Q8TB33 94 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 FNDC9Q8TBE3 224 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 HIST1H2BHQ93079 126 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 CAMK2N2Q96S95 79 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 HIST1H2BNQ99877 126 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 HIST1H2BMQ99879 126 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 TM2D3Q9BRN9 247 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 KRTAP4-1Q9BYQ7 146 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 OTORQ9NRC9 128 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 TMEM106BQ9NUM4 274 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 TAC3Q9UHF0 121 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 MRPS16Q9Y3D3 137 aaKnown RBP1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 CHCHD2Q9Y6H1 151 aaPredicted RBP1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 HLA-DRB4X5D2U9 266 aa1.84□□□□□ -2.11
UBE2D3-225ENST00000508476 UBR2Q8IWV8 1755 aa1.84□□□□□ -2.12
UBE2D3-225ENST00000508476 FLNCQ14315 2725 aa1.84□□□□□ -2.12
UBE2D3-225ENST00000508476 BAZ2AQ9UIF9 1905 aaKnown RBP1.83□□□□□ -2.12
UBE2D3-225ENST00000508476 ITPR2Q14571 2701 aa1.83□□□□□ -2.12
UBE2D3-225ENST00000508476 MYH11P35749 1972 aa1.83□□□□□ -2.12
UBE2D3-225ENST00000508476 FOCADQ5VW36 1801 aa1.83□□□□□ -2.12
UBE2D3-225ENST00000508476 TRAV12-2A0A075B6T6 113 aa1.83□□□□□ -2.12
UBE2D3-225ENST00000508476 PIGBOS1A0A0B4J2F0 54 aa1.83□□□□□ -2.12
UBE2D3-225ENST00000508476 SPAARA0A1B0GVQ0 90 aa1.83□□□□□ -2.12
UBE2D3-225ENST00000508476 ODAMA1E959 279 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms