RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 Q6ZTI0 123 aa16.96■□□□□ 0.31
SRPK1-210ENST00000508473 IQCF2Q8IXL9 164 aa16.96■□□□□ 0.31
SRPK1-210ENST00000508473 CYTL1Q9NRR1 136 aa16.96■□□□□ 0.31
SRPK1-210ENST00000508473 DNAH6Q9C0G6 4158 aa16.95■□□□□ 0.3
SRPK1-210ENST00000508473 MUC21Q5SSG8 566 aa16.95■□□□□ 0.3
SRPK1-210ENST00000508473 C15orf53Q8NAA6 179 aa16.95■□□□□ 0.3
SRPK1-210ENST00000508473 KLF12Q9Y4X4 402 aa16.95■□□□□ 0.3
SRPK1-210ENST00000508473 TRAV8-1A0A0A6YYK1 113 aa16.94■□□□□ 0.3
SRPK1-210ENST00000508473 TAAR5O14804 337 aa16.94■□□□□ 0.3
SRPK1-210ENST00000508473 NUDT3O95989 172 aa16.94■□□□□ 0.3
SRPK1-210ENST00000508473 CXorf1O96002 111 aa16.94■□□□□ 0.3
SRPK1-210ENST00000508473 OR5I1Q13606 314 aa16.94■□□□□ 0.3
SRPK1-210ENST00000508473 ZNF726P1Q15940 193 aa16.94■□□□□ 0.3
SRPK1-210ENST00000508473 SUN5Q8TC36 379 aa16.94■□□□□ 0.3
SRPK1-210ENST00000508473 ST6GAL2Q96JF0 529 aa16.94■□□□□ 0.3
SRPK1-210ENST00000508473 ARPC5LQ9BPX5 153 aa16.94■□□□□ 0.3
SRPK1-210ENST00000508473 TMED6Q8WW62 240 aa16.93■□□□□ 0.3
SRPK1-210ENST00000508473 SGK494Q96LW2 274 aa16.93■□□□□ 0.3
SRPK1-210ENST00000508473 TMEM167BQ9NRX6 74 aa16.93■□□□□ 0.3
SRPK1-210ENST00000508473 LENEPQ9Y5L5 61 aa16.93■□□□□ 0.3
SRPK1-210ENST00000508473 TRGV1A0A0A0MS02 117 aa16.92■□□□□ 0.3
SRPK1-210ENST00000508473 TCL1AP56279 114 aa16.92■□□□□ 0.3
SRPK1-210ENST00000508473 AKR1C8PQ5T2L2 129 aa16.92■□□□□ 0.3
SRPK1-210ENST00000508473 ARL6IP6Q8N6S5 226 aa16.92■□□□□ 0.3
SRPK1-210ENST00000508473 F6UZH7 168 aa16.91■□□□□ 0.3
SRPK1-210ENST00000508473 HOXA5P20719 270 aa16.91■□□□□ 0.3
SRPK1-210ENST00000508473 SUMO1P63165 101 aaKnown RBP16.91■□□□□ 0.3
SRPK1-210ENST00000508473 Q6AWC8 147 aa16.91■□□□□ 0.3
SRPK1-210ENST00000508473 OR11H4Q8NGC9 324 aa16.91■□□□□ 0.3
SRPK1-210ENST00000508473 TVP23CQ96ET8 276 aa16.91■□□□□ 0.3
SRPK1-210ENST00000508473 TMPRSS5Q9H3S3 457 aa16.91■□□□□ 0.3
SRPK1-210ENST00000508473 DNAH10Q8IVF4 4471 aa16.9■□□□□ 0.3
SRPK1-210ENST00000508473 TRGV2A0A075B6R0 118 aa16.9■□□□□ 0.3
SRPK1-210ENST00000508473 CTXND1A0A1B0GTU2 59 aa16.9■□□□□ 0.3
SRPK1-210ENST00000508473 M0R2N4 97 aa16.9■□□□□ 0.3
SRPK1-210ENST00000508473 IBA57Q5T440 356 aaKnown RBP16.9■□□□□ 0.3
SRPK1-210ENST00000508473 C5orf17Q8NAS9 161 aa16.9■□□□□ 0.3
SRPK1-210ENST00000508473 NAGKQ9UJ70 344 aa16.9■□□□□ 0.3
SRPK1-210ENST00000508473 TRAV26-1A0A087WT03 109 aa16.89■□□□□ 0.29
SRPK1-210ENST00000508473 A0A0J9YY99 117 aa16.89■□□□□ 0.29
SRPK1-210ENST00000508473 GGTLC3B5MD39 225 aa16.89■□□□□ 0.29
SRPK1-210ENST00000508473 TCRAP04437 139 aa16.89■□□□□ 0.29
SRPK1-210ENST00000508473 FGF8P55075 233 aaPredicted RBP16.89■□□□□ 0.29
SRPK1-210ENST00000508473 KCNRGQ8N5I3 272 aa16.89■□□□□ 0.29
SRPK1-210ENST00000508473 TREM1Q9NP99 234 aa16.89■□□□□ 0.29
SRPK1-210ENST00000508473 BIRC6Q9NR09 4857 aa16.89■□□□□ 0.29
SRPK1-210ENST00000508473 IGLV2-18A0A075B6J9 118 aa16.88■□□□□ 0.29
SRPK1-210ENST00000508473 SPINK4O60575 86 aa16.88■□□□□ 0.29
SRPK1-210ENST00000508473 RNF212Q495C1 297 aa16.88■□□□□ 0.29
SRPK1-210ENST00000508473 ATG101Q9BSB4 218 aa16.88■□□□□ 0.29
SRPK1-210ENST00000508473 MRPL16Q9NX20 251 aaKnown RBP16.88■□□□□ 0.29
SRPK1-210ENST00000508473 ZNF415Q09FC8 603 aa16.87■□□□□ 0.29
SRPK1-210ENST00000508473 ZNF345Q14585 488 aa16.87■□□□□ 0.29
SRPK1-210ENST00000508473 TMEM183BQ1AE95 376 aa16.87■□□□□ 0.29
SRPK1-210ENST00000508473 FAM159AQ6UWV7 190 aa16.87■□□□□ 0.29
SRPK1-210ENST00000508473 TMEM183AQ8IXX5 376 aa16.87■□□□□ 0.29
SRPK1-210ENST00000508473 MDFICQ9P1T7 246 aa16.87■□□□□ 0.29
SRPK1-210ENST00000508473 EPDR1Q9UM22 224 aa16.87■□□□□ 0.29
SRPK1-210ENST00000508473 SERTM2A0A1B0GWG4 89 aa16.86■□□□□ 0.29
SRPK1-210ENST00000508473 UBE2G2P60604 165 aa16.86■□□□□ 0.29
SRPK1-210ENST00000508473 HMSDA8MTL9 139 aa16.85■□□□□ 0.29
SRPK1-210ENST00000508473 K7EQM0 130 aa16.85■□□□□ 0.29
SRPK1-210ENST00000508473 NDFIP1Q9BT67 221 aa16.85■□□□□ 0.29
SRPK1-210ENST00000508473 PSG8Q9UQ74 426 aa16.85■□□□□ 0.29
SRPK1-210ENST00000508473 TRAV21A0A0B4J279 112 aa16.84■□□□□ 0.29
SRPK1-210ENST00000508473 A0A1W2PRE2 83 aa16.84■□□□□ 0.29
SRPK1-210ENST00000508473 IGHV3-53P01767 116 aa16.84■□□□□ 0.29
SRPK1-210ENST00000508473 C8orf49Q96NF6 230 aa16.84■□□□□ 0.29
SRPK1-210ENST00000508473 TRGV11A0A075B6L2 103 aa16.83■□□□□ 0.28
SRPK1-210ENST00000508473 MAP1LC3B2A6NCE7 125 aa16.83■□□□□ 0.28
SRPK1-210ENST00000508473 GNRH2O43555 120 aa16.83■□□□□ 0.28
SRPK1-210ENST00000508473 PRNTQ86SH4 94 aa16.83■□□□□ 0.28
SRPK1-210ENST00000508473 CYB561D1Q8N8Q1 229 aa16.83■□□□□ 0.28
SRPK1-210ENST00000508473 C18orf15Q96N68 181 aa16.83■□□□□ 0.28
SRPK1-210ENST00000508473 ZNF471Q9BX82 626 aaPredicted RBP16.83■□□□□ 0.28
SRPK1-210ENST00000508473 MAP1LC3BQ9GZQ8 125 aa16.83■□□□□ 0.28
SRPK1-210ENST00000508473 A0A0D9SG52 128 aa16.82■□□□□ 0.28
SRPK1-210ENST00000508473 IFNA7P01567 189 aa16.82■□□□□ 0.28
SRPK1-210ENST00000508473 IGLV2-11P01706 119 aa16.82■□□□□ 0.28
SRPK1-210ENST00000508473 FHITP49789 147 aa16.82■□□□□ 0.28
SRPK1-210ENST00000508473 FLI1Q01543 452 aaPredicted RBP16.82■□□□□ 0.28
SRPK1-210ENST00000508473 LGALS9BQ3B8N2 356 aa16.82■□□□□ 0.28
SRPK1-210ENST00000508473 TRAV34A0A0B4J273 112 aa16.81■□□□□ 0.28
SRPK1-210ENST00000508473 KANTRA0A1W2PQU2 76 aa16.81■□□□□ 0.28
SRPK1-210ENST00000508473 BCL2L11O43521 198 aa16.81■□□□□ 0.28
SRPK1-210ENST00000508473 ZNF80P51504 273 aaPredicted RBP16.81■□□□□ 0.28
SRPK1-210ENST00000508473 LINC00479Q96M42 142 aa16.81■□□□□ 0.28
SRPK1-210ENST00000508473 FRAS1Q86XX4 4008 aa16.81■□□□□ 0.28
SRPK1-210ENST00000508473 CCL18P55774 89 aa16.8■□□□□ 0.28
SRPK1-210ENST00000508473 TDRG1Q3Y452 100 aa16.8■□□□□ 0.28
SRPK1-210ENST00000508473 TMEM75Q8N9X5 138 aa16.8■□□□□ 0.28
SRPK1-210ENST00000508473 VSIG2Q96IQ7 327 aa16.8■□□□□ 0.28
SRPK1-210ENST00000508473 LINC00588Q9Y4M8 146 aa16.8■□□□□ 0.28
SRPK1-210ENST00000508473 FAM74A7A6NL05 159 aa16.79■□□□□ 0.28
SRPK1-210ENST00000508473 NACAE9PAV3 2078 aa16.79■□□□□ 0.28
SRPK1-210ENST00000508473 IGHV3-16A0A0C4DH30 117 aa16.78■□□□□ 0.28
SRPK1-210ENST00000508473 GCGP01275 180 aa16.78■□□□□ 0.28
SRPK1-210ENST00000508473 TYMSP04818 313 aa16.78■□□□□ 0.28
SRPK1-210ENST00000508473 SEC11BP0C7V7 166 aa16.78■□□□□ 0.28
SRPK1-210ENST00000508473 FAM3BP58499 235 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms