RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 TMED6Q8WW62 240 aa12.61□□□□□ -0.39
SMN1-204ENST00000506163 LINC00467Q9BRT7 94 aa12.61□□□□□ -0.39
SMN1-204ENST00000506163 KANTRA0A1W2PQU2 76 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 IGLV2-11P01706 119 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 TCRAP04437 139 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 SEC11BP0C7V7 166 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 IQCF2Q8IXL9 164 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 C5orf17Q8NAS9 161 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 LENEPQ9Y5L5 61 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 A0A1B0GVG6 124 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 A0A1W2PRE2 83 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 MAP1LC3B2A6NCE7 125 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 TCTAP57738 103 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 UBE2G2P60604 165 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 LGALS9CQ6DKI2 356 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 CCDC28AQ8IWP9 274 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 LINC00612Q8N6U2 182 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 MAP1LC3BQ9GZQ8 125 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 GSN-AS1Q9NRJ2 163 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 EPDR1Q9UM22 224 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 ANXA2RQ3ZCQ2 193 aa12.58□□□□□ -0.4
SMN1-204ENST00000506163 Q6AWC8 147 aa12.58□□□□□ -0.4
SMN1-204ENST00000506163 EIF4E3Q8N5X7 224 aaKnown RBP12.58□□□□□ -0.4
SMN1-204ENST00000506163 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
SMN1-204ENST00000506163 FAM74A7A6NL05 159 aa12.57□□□□□ -0.4
SMN1-204ENST00000506163 C1QBP02746 253 aa12.57□□□□□ -0.4
SMN1-204ENST00000506163 LINC00479Q96M42 142 aa12.57□□□□□ -0.4
SMN1-204ENST00000506163 KLF12Q9Y4X4 402 aa12.57□□□□□ -0.4
SMN1-204ENST00000506163 CBY3A6NI87 242 aa12.56□□□□□ -0.4
SMN1-204ENST00000506163 RGS13O14921 159 aa12.56□□□□□ -0.4
SMN1-204ENST00000506163 PFDN1O60925 122 aa12.56□□□□□ -0.4
SMN1-204ENST00000506163 DAZ2Q13117 558 aaKnown RBP12.56□□□□□ -0.4
SMN1-204ENST00000506163 MUC21Q5SSG8 566 aa12.56□□□□□ -0.4
SMN1-204ENST00000506163 STOML3Q8TAV4 291 aa12.56□□□□□ -0.4
SMN1-204ENST00000506163 F6UZH7 168 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 Q6ZTI0 123 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 FAM213BQ8TBF2 198 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 MBD3L1Q8WWY6 194 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 C8orf49Q96NF6 230 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 NDUFAF3Q9BU61 184 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 TREM1Q9NP99 234 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 PSG8Q9UQ74 426 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 DNAH6Q9C0G6 4158 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 GAGE12BA1L429 117 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 GAGE7O76087 117 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 GAGE12FP0CL80 117 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 GAGE12GP0CL81 117 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 GAGE12IP0CL82 117 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 ZNF80P51504 273 aaPredicted RBP12.54□□□□□ -0.4
SMN1-204ENST00000506163 TMEM88Q6PEY1 159 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 AKAP14Q86UN6 197 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 MDFICQ9P1T7 246 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 TRAV34A0A0B4J273 112 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 SERTM2A0A1B0GWG4 89 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 SNURFLB1AK76 121 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 UMAD1C9J7I0 102 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 F5H768 121 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 TPT1P13693 172 aaKnown RBP12.54□□□□□ -0.4
SMN1-204ENST00000506163 CYB561D1Q8N8Q1 229 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 ZNF680Q8NEM1 530 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 SFT2D1Q8WV19 159 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 ATG101Q9BSB4 218 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 A0A1B0GV50 99 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 ATP5G1P05496 136 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 ATP5G3P48201 142 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 TCL1AP56279 114 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 FLI1Q01543 452 aaPredicted RBP12.53□□□□□ -0.4
SMN1-204ENST00000506163 PRNTQ86SH4 94 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 TMEM75Q8N9X5 138 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 FAM210BQ96KR6 192 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 SPINK4O60575 86 aa12.52□□□□□ -0.41
SMN1-204ENST00000506163 IFNA7P01567 189 aa12.52□□□□□ -0.41
SMN1-204ENST00000506163 HOXA5P20719 270 aa12.52□□□□□ -0.41
SMN1-204ENST00000506163 EIF5AP63241 154 aaKnown RBP12.52□□□□□ -0.41
SMN1-204ENST00000506163 IBA57Q5T440 356 aaKnown RBP12.52□□□□□ -0.41
SMN1-204ENST00000506163 C11orf21Q9P2W6 132 aa12.52□□□□□ -0.41
SMN1-204ENST00000506163 PEX7O00628 323 aa12.51□□□□□ -0.41
SMN1-204ENST00000506163 GNRH2O43555 120 aa12.51□□□□□ -0.41
SMN1-204ENST00000506163 DPPA3Q6W0C5 159 aa12.51□□□□□ -0.41
SMN1-204ENST00000506163 C9orf62Q8N4C0 152 aa12.51□□□□□ -0.41
SMN1-204ENST00000506163 MUC4Q99102 2169 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 K7EQM0 130 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 PAGE4O60829 102 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 CCL20P78556 96 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 TMEM183BQ1AE95 376 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 TDRG1Q3Y452 100 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 TMEM183AQ8IXX5 376 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 NKX6-2Q9C056 277 aaPredicted RBP12.5□□□□□ -0.41
SMN1-204ENST00000506163 NAGKQ9UJ70 344 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 TRGV1A0A0A0MS02 117 aa12.49□□□□□ -0.41
SMN1-204ENST00000506163 TRAV21A0A0B4J279 112 aa12.49□□□□□ -0.41
SMN1-204ENST00000506163 H2AFB1P0C5Y9 115 aa12.49□□□□□ -0.41
SMN1-204ENST00000506163 MRPL16Q9NX20 251 aaKnown RBP12.49□□□□□ -0.41
SMN1-204ENST00000506163 IGHV3-16A0A0C4DH30 117 aa12.48□□□□□ -0.41
SMN1-204ENST00000506163 CST9LP1Q5W188 147 aa12.48□□□□□ -0.41
SMN1-204ENST00000506163 FAM159AQ6UWV7 190 aa12.48□□□□□ -0.41
SMN1-204ENST00000506163 C18orf15Q96N68 181 aa12.48□□□□□ -0.41
SMN1-204ENST00000506163 NDFIP1Q9BT67 221 aa12.48□□□□□ -0.41
SMN1-204ENST00000506163 ARL2-SNX15V9GYD0 113 aa12.48□□□□□ -0.41
SMN1-204ENST00000506163 GCGP01275 180 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms