RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 RBMY1DP0C7P1 496 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 CD33P20138 364 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 ID1P41134 155 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 FAM3BP58499 235 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 RPL19P84098 196 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 HIST1H1AQ02539 215 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 SAPCD1Q5SSQ6 148 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 AMTNQ6UX39 209 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 RBPMS2Q6ZRY4 209 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 APRG1Q8IVJ8 170 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 C15orf54Q8N8G6 183 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 SPAG8Q99932 426 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 SAV1Q9H4B6 383 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 MAP6D1Q9H9H5 199 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 IL36BQ9NZH7 164 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 C11orf21Q9P2W6 132 aa5.12□□□□□ -1.59
TOPBP1-203ENST00000503464 TRBV24-1A0A075B6N3 115 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 SMIM27A0A1W2PRY6 76 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 KNCNA6PVL3 124 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 ZNF705GA8MUZ8 300 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 GATCO43716 136 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 FRMD6-AS1P0C7T7 363 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 CRISP2P16562 243 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 TCL1AP56279 114 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 DEFB131AP59861 70 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 SNRPD3P62318 126 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 TMEM78Q5T7P6 136 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 OR10J6PQ8NGY7 276 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 GTSF1Q8WW33 167 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 LINC00477Q96M19 166 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 IMMP2LQ96T52 175 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 ZNF747Q9BV97 191 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 RPP21Q9H633 154 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 C19orf73Q9NVV2 129 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 LENEPQ9Y5L5 61 aa5.11□□□□□ -1.59
TOPBP1-203ENST00000503464 STAB1Q9NY15 2570 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 ANK2Q01484 3957 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 IGKV3D-20A0A0C4DH25 116 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 A0A1W2PPQ1 181 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 OR4C46A6NHA9 309 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 KLLNB2CW77 178 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 PHOX2AO14813 284 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 P01737 135 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 GZMBP10144 247 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 HLA-DRB4P13762 266 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 RAB5AP20339 215 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 PAFAH1B2P68402 229 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 BEAN1Q3B7T3 259 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 SMUG1Q53HV7 270 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 CT83Q5H943 113 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 FAM162BQ5T6X4 162 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 FOXI2Q6ZQN5 318 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 ODF3Q96PU9 254 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 NEU1Q99519 415 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 WFDC10AQ9H1F0 79 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 HLA-DRB4X5D2U9 266 aa5.1□□□□□ -1.59
TOPBP1-203ENST00000503464 TRBV7-9A0A0J9YWB2 115 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 H3BMM0 161 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 J3KRW8 73 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 IGKV3-20P01619 116 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 TYMSP04818 313 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 CD7P09564 240 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 RBMY1A1P0DJD3 496 aaKnown RBP5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 RBMY1CP0DJD4 496 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 RBMY1FQ15415 496 aaKnown RBP5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 WFDC9Q8NEX5 89 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 NUP35Q8NFH5 326 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 OR4B1Q8NGF8 309 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 OR2D3Q8NGH3 330 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 OR2K2Q8NGT1 345 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 TSKUQ8WUA8 353 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 FAM210BQ96KR6 192 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 NDFIP1Q9BT67 221 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 BIN3Q9NQY0 253 aa5.09□□□□□ -1.59
TOPBP1-203ENST00000503464 DNAH3Q8TD57 4116 aa5.08□□□□□ -1.6
TOPBP1-203ENST00000503464 TRAV12-2A0A075B6T6 113 aa5.08□□□□□ -1.6
TOPBP1-203ENST00000503464 TMSB15BA0A087X1C1 80 aa5.08□□□□□ -1.6
TOPBP1-203ENST00000503464 A0A1B0GXF2 115 aa5.08□□□□□ -1.6
TOPBP1-203ENST00000503464 HIGD1CA8MV81 97 aa5.08□□□□□ -1.6
TOPBP1-203ENST00000503464 M0R2Z0 102 aa5.08□□□□□ -1.6
TOPBP1-203ENST00000503464 CRXO43186 299 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-203ENST00000503464 SPINK13Q1W4C9 94 aa5.08□□□□□ -1.6
TOPBP1-203ENST00000503464 ACTL10Q5JWF8 245 aa5.08□□□□□ -1.6
TOPBP1-203ENST00000503464 GFI1BQ5VTD9 330 aa5.08□□□□□ -1.6
TOPBP1-203ENST00000503464 Q6AWC8 147 aa5.08□□□□□ -1.6
TOPBP1-203ENST00000503464 EBLN2Q6P2I7 272 aa5.08□□□□□ -1.6
TOPBP1-203ENST00000503464 DAZAP1Q96EP5 407 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-203ENST00000503464 NOTCH3Q9UM47 2321 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 MUC4Q99102 2169 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 TRAV9-1A0A075B6T8 112 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 TMEM189A5PLL7 270 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 FABP5P3A8MUU1 101 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 SPINK4O60575 86 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 ZNF324O75467 553 aaPredicted RBP5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 DUSP14O95147 198 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 GPX1P07203 203 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 IGLC6P0CF74 106 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 IGLL1P15814 213 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 S100PP25815 95 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 RNASE4P34096 147 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms