RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 IGFL4Q6B9Z1 124 aa12□□□□□ -0.49
LMNA-217ENST00000498722 DAZAP1Q96EP5 407 aaKnown RBP12□□□□□ -0.49
LMNA-217ENST00000498722 NDFIP1Q9BT67 221 aa12□□□□□ -0.49
LMNA-217ENST00000498722 IGKV2-40A0A087WW87 121 aaPredicted RBP11.99□□□□□ -0.49
LMNA-217ENST00000498722 C1orf196B1AJZ1 125 aa11.99□□□□□ -0.49
LMNA-217ENST00000498722 IGKV2D-40P01614 121 aaPredicted RBP11.99□□□□□ -0.49
LMNA-217ENST00000498722 ID1P41134 155 aa11.99□□□□□ -0.49
LMNA-217ENST00000498722 PRR27Q6MZM9 219 aa11.99□□□□□ -0.49
LMNA-217ENST00000498722 A0A1W2PPQ1 181 aa11.98□□□□□ -0.49
LMNA-217ENST00000498722 SOCS3O14543 225 aa11.98□□□□□ -0.49
LMNA-217ENST00000498722 CT45A10P0DMU9 189 aa11.98□□□□□ -0.49
LMNA-217ENST00000498722 RPS10P46783 165 aaKnown RBP11.98□□□□□ -0.49
LMNA-217ENST00000498722 ODF3L2Q3SX64 289 aa11.98□□□□□ -0.49
LMNA-217ENST00000498722 RNF182Q8N6D2 247 aa11.98□□□□□ -0.49
LMNA-217ENST00000498722 NUDT10Q8NFP7 164 aa11.98□□□□□ -0.49
LMNA-217ENST00000498722 OR4B1Q8NGF8 309 aa11.98□□□□□ -0.49
LMNA-217ENST00000498722 NUDT11Q96G61 164 aa11.98□□□□□ -0.49
LMNA-217ENST00000498722 ZMAT4Q9H898 229 aa11.98□□□□□ -0.49
LMNA-217ENST00000498722 AGRNO00468 2067 aa11.97□□□□□ -0.49
LMNA-217ENST00000498722 C19orf71A6NCJ1 209 aa11.97□□□□□ -0.49
LMNA-217ENST00000498722 RBMY1BA6NDE4 496 aaKnown RBP11.97□□□□□ -0.49
LMNA-217ENST00000498722 RBMY1EA6NEQ0 496 aaKnown RBP11.97□□□□□ -0.49
LMNA-217ENST00000498722 ZNF705FA8MVS1 300 aaPredicted RBP11.97□□□□□ -0.49
LMNA-217ENST00000498722 P01737 135 aa11.97□□□□□ -0.49
LMNA-217ENST00000498722 RBMY1DP0C7P1 496 aaKnown RBP11.97□□□□□ -0.49
LMNA-217ENST00000498722 CMC4P56277 68 aaPredicted RBP11.97□□□□□ -0.49
LMNA-217ENST00000498722 RAB5BP61020 215 aa11.97□□□□□ -0.49
LMNA-217ENST00000498722 CT83Q5H943 113 aa11.97□□□□□ -0.49
LMNA-217ENST00000498722 COX8CQ7Z4L0 72 aa11.97□□□□□ -0.49
LMNA-217ENST00000498722 APRG1Q8IVJ8 170 aa11.97□□□□□ -0.49
LMNA-217ENST00000498722 ZNF738Q8NE65 137 aa11.97□□□□□ -0.49
LMNA-217ENST00000498722 TYMSP04818 313 aa11.96□□□□□ -0.49
LMNA-217ENST00000498722 FAM3BP58499 235 aaPredicted RBP11.96□□□□□ -0.49
LMNA-217ENST00000498722 TMEM78Q5T7P6 136 aa11.96□□□□□ -0.49
LMNA-217ENST00000498722 RPP21Q9H633 154 aaKnown RBP11.96□□□□□ -0.49
LMNA-217ENST00000498722 MAP6D1Q9H9H5 199 aa11.96□□□□□ -0.49
LMNA-217ENST00000498722 U3KQK5 164 aa11.96□□□□□ -0.49
LMNA-217ENST00000498722 LOC102724200A0A096LPH7 203 aaPredicted RBP11.95□□□□□ -0.5
LMNA-217ENST00000498722 TRAV2A0A0B4J234 112 aa11.95□□□□□ -0.5
LMNA-217ENST00000498722 SMIM27A0A1W2PRY6 76 aa11.95□□□□□ -0.5
LMNA-217ENST00000498722 ZNF124Q15973 351 aa11.95□□□□□ -0.5
LMNA-217ENST00000498722 C9orf47Q6ZRZ4 202 aa11.95□□□□□ -0.5
LMNA-217ENST00000498722 ZC2HC1AQ96GY0 325 aa11.95□□□□□ -0.5
LMNA-217ENST00000498722 VGLL1Q99990 258 aa11.95□□□□□ -0.5
LMNA-217ENST00000498722 PPP1R14DQ9NXH3 145 aa11.95□□□□□ -0.5
LMNA-217ENST00000498722 A8MWL6 223 aa11.94□□□□□ -0.5
LMNA-217ENST00000498722 PRAC2D3DTV9 90 aa11.94□□□□□ -0.5
LMNA-217ENST00000498722 NPIPB6E9PJ23 425 aa11.94□□□□□ -0.5
LMNA-217ENST00000498722 ZNF688P0C7X2 276 aa11.94□□□□□ -0.5
LMNA-217ENST00000498722 RPL35AP18077 110 aaKnown RBP11.94□□□□□ -0.5
LMNA-217ENST00000498722 DEFB131AP59861 70 aa11.94□□□□□ -0.5
LMNA-217ENST00000498722 SMUG1Q53HV7 270 aa11.94□□□□□ -0.5
LMNA-217ENST00000498722 NBEAL2Q6ZNJ1 2754 aa11.94□□□□□ -0.5
LMNA-217ENST00000498722 OR10J6PQ8NGY7 276 aa11.94□□□□□ -0.5
LMNA-217ENST00000498722 RCHY1Q96PM5 261 aa11.94□□□□□ -0.5
LMNA-217ENST00000498722 FAM110AQ9BQ89 295 aa11.94□□□□□ -0.5
LMNA-217ENST00000498722 LENEPQ9Y5L5 61 aa11.94□□□□□ -0.5
LMNA-217ENST00000498722 K7EQG2 157 aa11.93□□□□□ -0.5
LMNA-217ENST00000498722 ZNF138P52744 262 aa11.93□□□□□ -0.5
LMNA-217ENST00000498722 COX19Q49B96 90 aa11.93□□□□□ -0.5
LMNA-217ENST00000498722 DCANP1Q8TF63 244 aa11.93□□□□□ -0.5
LMNA-217ENST00000498722 TSKUQ8WUA8 353 aa11.93□□□□□ -0.5
LMNA-217ENST00000498722 C20orf173Q96LM9 149 aa11.93□□□□□ -0.5
LMNA-217ENST00000498722 LINC00477Q96M19 166 aa11.93□□□□□ -0.5
LMNA-217ENST00000498722 C8orf49Q96NF6 230 aa11.93□□□□□ -0.5
LMNA-217ENST00000498722 SPATA25Q9BR10 227 aa11.93□□□□□ -0.5
LMNA-217ENST00000498722 GFRA4Q9GZZ7 299 aa11.93□□□□□ -0.5
LMNA-217ENST00000498722 FAM231BA6NCW3 169 aa11.92□□□□□ -0.5
LMNA-217ENST00000498722 SNRPD3P62318 126 aaKnown RBP11.92□□□□□ -0.5
LMNA-217ENST00000498722 ERCC8Q13216 396 aa11.92□□□□□ -0.5
LMNA-217ENST00000498722 FAM162BQ5T6X4 162 aa11.92□□□□□ -0.5
LMNA-217ENST00000498722 LINC00322Q6ZN03 302 aaPredicted RBP11.92□□□□□ -0.5
LMNA-217ENST00000498722 TM2D3Q9BRN9 247 aa11.92□□□□□ -0.5
LMNA-217ENST00000498722 AGPAT4-IT1Q9H0P7 198 aa11.92□□□□□ -0.5
LMNA-217ENST00000498722 NAT8BQ9UHF3 227 aa11.92□□□□□ -0.5
LMNA-217ENST00000498722 TENM3Q9P273 2699 aa11.92□□□□□ -0.5
LMNA-217ENST00000498722 APOC4P55056 127 aa11.91□□□□□ -0.5
LMNA-217ENST00000498722 PSMG4Q5JS54 123 aa11.91□□□□□ -0.5
LMNA-217ENST00000498722 Q8TAT8 98 aa11.91□□□□□ -0.5
LMNA-217ENST00000498722 RETNQ9HD89 108 aa11.91□□□□□ -0.5
LMNA-217ENST00000498722 XKRY2A2RUG3 117 aa11.9□□□□□ -0.5
LMNA-217ENST00000498722 PRB4P10163 310 aaPredicted RBP11.9□□□□□ -0.5
LMNA-217ENST00000498722 OR2D3Q8NGH3 330 aa11.9□□□□□ -0.5
LMNA-217ENST00000498722 DNAH9Q9NYC9 4486 aa11.9□□□□□ -0.5
LMNA-217ENST00000498722 TRBV7-9A0A0J9YWB2 115 aa11.89□□□□□ -0.51
LMNA-217ENST00000498722 RPS20P60866 119 aaKnown RBP11.89□□□□□ -0.51
LMNA-217ENST00000498722 WDR73Q6P4I2 378 aa11.89□□□□□ -0.51
LMNA-217ENST00000498722 RASL11AQ6T310 242 aa11.89□□□□□ -0.51
LMNA-217ENST00000498722 STHQ8IWL8 128 aa11.89□□□□□ -0.51
LMNA-217ENST00000498722 OR8A1Q8NGG7 326 aa11.89□□□□□ -0.51
LMNA-217ENST00000498722 SAV1Q9H4B6 383 aaPredicted RBP11.89□□□□□ -0.51
LMNA-217ENST00000498722 FABP5P3A8MUU1 101 aa11.88□□□□□ -0.51
LMNA-217ENST00000498722 SH2D1AO60880 128 aa11.88□□□□□ -0.51
LMNA-217ENST00000498722 CA1P00915 261 aaPredicted RBP11.88□□□□□ -0.51
LMNA-217ENST00000498722 TRGC2P03986 189 aa11.88□□□□□ -0.51
LMNA-217ENST00000498722 CRIP1P50238 77 aa11.88□□□□□ -0.51
LMNA-217ENST00000498722 TCL1AP56279 114 aa11.88□□□□□ -0.51
LMNA-217ENST00000498722 NEU1Q99519 415 aa11.88□□□□□ -0.51
LMNA-217ENST00000498722 TMEM189A5PLL7 270 aa11.87□□□□□ -0.51
LMNA-217ENST00000498722 KNCNA6PVL3 124 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms