RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 MED9Q9NWA0 146 aa13.35□□□□□ -0.27
TSSC4-210ENST00000496468 HUWE1Q7Z6Z7 4374 aaKnown RBP13.35□□□□□ -0.27
TSSC4-210ENST00000496468 TMEM250H0YL14 139 aa13.34□□□□□ -0.27
TSSC4-210ENST00000496468 LTAP01374 205 aa13.34□□□□□ -0.27
TSSC4-210ENST00000496468 NHLRC4P0CG21 123 aaPredicted RBP13.34□□□□□ -0.27
TSSC4-210ENST00000496468 RBMY1A1P0DJD3 496 aaKnown RBP13.34□□□□□ -0.27
TSSC4-210ENST00000496468 RBMY1CP0DJD4 496 aa13.34□□□□□ -0.27
TSSC4-210ENST00000496468 RNASE4P34096 147 aaKnown RBP13.34□□□□□ -0.27
TSSC4-210ENST00000496468 RBMY1FQ15415 496 aaKnown RBP13.34□□□□□ -0.27
TSSC4-210ENST00000496468 SAPCD1Q5SSQ6 148 aa13.34□□□□□ -0.27
TSSC4-210ENST00000496468 TMEM256Q8N2U0 113 aa13.34□□□□□ -0.27
TSSC4-210ENST00000496468 TVP23CQ96ET8 276 aa13.34□□□□□ -0.27
TSSC4-210ENST00000496468 C8orf49Q96NF6 230 aa13.34□□□□□ -0.27
TSSC4-210ENST00000496468 NIPSNAP3BQ9BS92 247 aa13.34□□□□□ -0.27
TSSC4-210ENST00000496468 TRAV12-3A0A0B4J271 114 aa13.33□□□□□ -0.28
TSSC4-210ENST00000496468 NDUFS6O75380 124 aaKnown RBP13.33□□□□□ -0.28
TSSC4-210ENST00000496468 CEBPGP53567 150 aa13.33□□□□□ -0.28
TSSC4-210ENST00000496468 SMUG1Q53HV7 270 aa13.33□□□□□ -0.28
TSSC4-210ENST00000496468 ZNF705AQ6ZN79 300 aaPredicted RBP13.33□□□□□ -0.28
TSSC4-210ENST00000496468 C1orf158Q8N1D5 194 aa13.33□□□□□ -0.28
TSSC4-210ENST00000496468 ZFP30Q9Y2G7 519 aa13.33□□□□□ -0.28
TSSC4-210ENST00000496468 TAS2R60P59551 318 aa13.32□□□□□ -0.28
TSSC4-210ENST00000496468 PEA15Q15121 130 aa13.32□□□□□ -0.28
TSSC4-210ENST00000496468 CENPWQ5EE01 88 aa13.32□□□□□ -0.28
TSSC4-210ENST00000496468 OR11H2Q8NH07 326 aa13.32□□□□□ -0.28
TSSC4-210ENST00000496468 H7BYZ3 331 aa13.31□□□□□ -0.28
TSSC4-210ENST00000496468 GCGP01275 180 aa13.31□□□□□ -0.28
TSSC4-210ENST00000496468 Q6AWC8 147 aa13.31□□□□□ -0.28
TSSC4-210ENST00000496468 GNG4P50150 75 aa13.3□□□□□ -0.28
TSSC4-210ENST00000496468 ZNF674Q2M3X9 581 aa13.3□□□□□ -0.28
TSSC4-210ENST00000496468 BAGE2Q86Y30 109 aa13.3□□□□□ -0.28
TSSC4-210ENST00000496468 TMEM183AQ8IXX5 376 aa13.3□□□□□ -0.28
TSSC4-210ENST00000496468 NHLRC2Q8NBF2 726 aa13.3□□□□□ -0.28
TSSC4-210ENST00000496468 LINC01587Q99440 93 aa13.3□□□□□ -0.28
TSSC4-210ENST00000496468 PARLQ9H300 379 aa13.3□□□□□ -0.28
TSSC4-210ENST00000496468 SMDT1Q9H4I9 107 aa13.3□□□□□ -0.28
TSSC4-210ENST00000496468 X6R8D5 127 aa13.3□□□□□ -0.28
TSSC4-210ENST00000496468 TRAV21A0A0B4J279 112 aa13.29□□□□□ -0.28
TSSC4-210ENST00000496468 SRP19P09132 144 aaKnown RBP13.29□□□□□ -0.28
TSSC4-210ENST00000496468 SRSF3P84103 164 aaKnown RBP13.29□□□□□ -0.28
TSSC4-210ENST00000496468 RAB19A4D1S5 217 aa13.28□□□□□ -0.28
TSSC4-210ENST00000496468 ZNF324O75467 553 aaPredicted RBP13.28□□□□□ -0.28
TSSC4-210ENST00000496468 MIFP14174 115 aa13.28□□□□□ -0.28
TSSC4-210ENST00000496468 ZC2HC1AQ96GY0 325 aa13.28□□□□□ -0.28
TSSC4-210ENST00000496468 NEU1Q99519 415 aa13.28□□□□□ -0.28
TSSC4-210ENST00000496468 PYGO2Q9BRQ0 406 aa13.28□□□□□ -0.28
TSSC4-210ENST00000496468 NAGKQ9UJ70 344 aa13.28□□□□□ -0.28
TSSC4-210ENST00000496468 TRBV20OR9-2A0A075B6H5 130 aa13.27□□□□□ -0.29
TSSC4-210ENST00000496468 PFN1P07737 140 aaKnown RBP13.27□□□□□ -0.29
TSSC4-210ENST00000496468 ZNF80P51504 273 aaPredicted RBP13.27□□□□□ -0.29
TSSC4-210ENST00000496468 RRN3P1Q2M238 152 aa13.27□□□□□ -0.29
TSSC4-210ENST00000496468 Q6ZQT7 251 aa13.27□□□□□ -0.29
TSSC4-210ENST00000496468 COX8CQ7Z4L0 72 aa13.27□□□□□ -0.29
TSSC4-210ENST00000496468 SMIM12Q96EX1 92 aa13.27□□□□□ -0.29
TSSC4-210ENST00000496468 SMIM7Q9BQ49 75 aa13.27□□□□□ -0.29
TSSC4-210ENST00000496468 SMIM9A6NGZ8 99 aa13.26□□□□□ -0.29
TSSC4-210ENST00000496468 ZNF705GA8MUZ8 300 aaPredicted RBP13.26□□□□□ -0.29
TSSC4-210ENST00000496468 C9JCJ5 164 aa13.26□□□□□ -0.29
TSSC4-210ENST00000496468 C9JQL5 133 aa13.26□□□□□ -0.29
TSSC4-210ENST00000496468 HTN1P15515 57 aa13.26□□□□□ -0.29
TSSC4-210ENST00000496468 FAM162BQ5T6X4 162 aa13.26□□□□□ -0.29
TSSC4-210ENST00000496468 Q8NAQ8 132 aa13.26□□□□□ -0.29
TSSC4-210ENST00000496468 U3KQK5 164 aa13.26□□□□□ -0.29
TSSC4-210ENST00000496468 IGHV1OR15-1A0A075B7D0 117 aa13.25□□□□□ -0.29
TSSC4-210ENST00000496468 IGHV4-28A0A0C4DH34 117 aa13.25□□□□□ -0.29
TSSC4-210ENST00000496468 MGST1P10620 155 aaKnown RBP13.25□□□□□ -0.29
TSSC4-210ENST00000496468 MUC21Q5SSG8 566 aa13.25□□□□□ -0.29
TSSC4-210ENST00000496468 PRR27Q6MZM9 219 aa13.25□□□□□ -0.29
TSSC4-210ENST00000496468 COMMD7Q86VX2 200 aa13.25□□□□□ -0.29
TSSC4-210ENST00000496468 LINC00467Q9BRT7 94 aa13.25□□□□□ -0.29
TSSC4-210ENST00000496468 MLST8Q9BVC4 326 aa13.25□□□□□ -0.29
TSSC4-210ENST00000496468 PGPEP1LA6NFU8 196 aa13.24□□□□□ -0.29
TSSC4-210ENST00000496468 CBY3A6NI87 242 aa13.24□□□□□ -0.29
TSSC4-210ENST00000496468 ZNF727A8MUV8 499 aa13.24□□□□□ -0.29
TSSC4-210ENST00000496468 SH2D1AO60880 128 aa13.24□□□□□ -0.29
TSSC4-210ENST00000496468 FAM159AQ6UWV7 190 aa13.24□□□□□ -0.29
TSSC4-210ENST00000496468 EIF4E3Q8N5X7 224 aaKnown RBP13.24□□□□□ -0.29
TSSC4-210ENST00000496468 TMEM263Q8WUH6 116 aaKnown RBP13.24□□□□□ -0.29
TSSC4-210ENST00000496468 C16orf74Q96GX8 76 aa13.24□□□□□ -0.29
TSSC4-210ENST00000496468 C11orf68Q9H3H3 251 aaKnown RBP13.24□□□□□ -0.29
TSSC4-210ENST00000496468 NBEAL2Q6ZNJ1 2754 aa13.24□□□□□ -0.29
TSSC4-210ENST00000496468 IGLV2-8P01709 118 aa13.23□□□□□ -0.29
TSSC4-210ENST00000496468 COL7A1Q02388 2944 aa13.23□□□□□ -0.29
TSSC4-210ENST00000496468 A0A0J9YWU9 116 aa13.22□□□□□ -0.29
TSSC4-210ENST00000496468 LINC00862A6NCI5 91 aa13.22□□□□□ -0.29
TSSC4-210ENST00000496468 FABP5P3A8MUU1 101 aa13.22□□□□□ -0.29
TSSC4-210ENST00000496468 DEFB4AO15263 64 aa13.22□□□□□ -0.29
TSSC4-210ENST00000496468 PRM2P04554 102 aa13.22□□□□□ -0.29
TSSC4-210ENST00000496468 FAM74A3Q4VXF1 159 aa13.22□□□□□ -0.29
TSSC4-210ENST00000496468 UQCC3Q6UW78 93 aa13.22□□□□□ -0.29
TSSC4-210ENST00000496468 RNASE8Q8TDE3 154 aaKnown RBP13.22□□□□□ -0.29
TSSC4-210ENST00000496468 SDF2L1Q9HCN8 221 aa13.22□□□□□ -0.29
TSSC4-210ENST00000496468 BIN3Q9NQY0 253 aa13.22□□□□□ -0.29
TSSC4-210ENST00000496468 TENM3Q9P273 2699 aa13.22□□□□□ -0.29
TSSC4-210ENST00000496468 TRGV11A0A075B6L2 103 aa13.21□□□□□ -0.29
TSSC4-210ENST00000496468 TMEM189A5PLL7 270 aa13.21□□□□□ -0.29
TSSC4-210ENST00000496468 SFTA3P0C7M3 94 aa13.21□□□□□ -0.29
TSSC4-210ENST00000496468 AZU1P20160 251 aa13.21□□□□□ -0.29
TSSC4-210ENST00000496468 CRIP1P50238 77 aa13.21□□□□□ -0.29
TSSC4-210ENST00000496468 TDRG1Q3Y452 100 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms