RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 KLF14Q8TD94 323 aaPredicted RBP5.55□□□□□ -1.52
EPHA3-203ENST00000494014 RNASE6Q93091 150 aaKnown RBP5.55□□□□□ -1.52
EPHA3-203ENST00000494014 TMEM126AQ9H061 195 aa5.55□□□□□ -1.52
EPHA3-203ENST00000494014 BEX4Q9NWD9 120 aaPredicted RBP5.55□□□□□ -1.52
EPHA3-203ENST00000494014 UTP20O75691 2785 aaKnown RBP5.55□□□□□ -1.52
EPHA3-203ENST00000494014 ITPR2Q14571 2701 aa5.55□□□□□ -1.52
EPHA3-203ENST00000494014 ZGRF1Q86YA3 2104 aa5.55□□□□□ -1.52
EPHA3-203ENST00000494014 TMEM213A2RRL7 107 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 TMEM160Q9NX00 188 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 HIGD1AQ9Y241 93 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 SRRM5B3KS81 715 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 CCDC179H3BU77 68 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 DIAPH2-AS1Q14236 149 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 C17orf58Q2M2W7 97 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 PPP1R27Q86WC6 154 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 TMEM167AQ8TBQ9 72 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 DSCAML1Q8TD84 2053 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 IGKV1D-17A0A075B6S4 117 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 TRAV40A0A0B4J280 105 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 LOC107984156A0A0G2JMH3 177 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 UBE2D1P51668 147 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 PLGLAQ15195 96 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 ARL17AQ8IVW1 177 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 MYOZ3Q8TDC0 251 aa5.54□□□□□ -1.52
EPHA3-203ENST00000494014 PINLYPA6NC86 204 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 LINC01549A6NIU2 74 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 TIMM8AO60220 97 aaPredicted RBP5.53□□□□□ -1.52
EPHA3-203ENST00000494014 IGKV1-16P04430 117 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 OR11H6Q8NGC7 330 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 LEAP2Q969E1 77 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 RASL11BQ9BPW5 248 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 MRPL35Q9NZE8 188 aaKnown RBP5.53□□□□□ -1.52
EPHA3-203ENST00000494014 COL12A1Q99715 3063 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 SPTAN1Q13813 2472 aaKnown RBP5.53□□□□□ -1.52
EPHA3-203ENST00000494014 TRGV5A0A0B4J1U4 118 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 A0A0G2JNJ9 132 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 SCGB1C2P0DMR2 95 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 CRIP1P50238 77 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 WT1-ASQ06250 92 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 Q8N8P6 123 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 OR4C13Q8NGP0 309 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 PTH2Q96A98 100 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 Q9UFV3 132 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 CELSR2Q9HCU4 2923 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 MYO9AB2RTY4 2548 aa5.53□□□□□ -1.52
EPHA3-203ENST00000494014 H3BTX0 84 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 PVRIGQ6DKI7 326 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 SEM1Q6ZVN7 128 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 EXOC3-AS1Q8N2X6 119 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 ANKRD29Q8N6D5 301 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 OR10J6PQ8NGY7 276 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 IGFBPL1Q8WX77 278 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 DOCK7Q96N67 2140 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 RAB1BQ9H0U4 201 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 MRPL36Q9P0J6 103 aaKnown RBP5.52□□□□□ -1.53
EPHA3-203ENST00000494014 SPRR3Q9UBC9 169 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 TRAV12-1A0A0B4J245 112 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 SMKR1H3BMG3 65 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 TNFRSF1AP19438 455 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 HOXA4Q00056 320 aaPredicted RBP5.52□□□□□ -1.53
EPHA3-203ENST00000494014 SPXQ9BT56 116 aa5.52□□□□□ -1.53
EPHA3-203ENST00000494014 TNFRSF6BO95407 300 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 KRTAP10-9P60411 292 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 SRSF2Q01130 221 aaKnown RBP5.51□□□□□ -1.53
EPHA3-203ENST00000494014 MRPL23Q16540 153 aaKnown RBP5.51□□□□□ -1.53
EPHA3-203ENST00000494014 COX8CQ7Z4L0 72 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 AJUBAQ96IF1 538 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 KIR2DL4Q99706 377 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 LINC00574Q9H8X3 128 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 MDFICQ9P1T7 246 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 VPREB3Q9UKI3 123 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 SPTBN1Q01082 2364 aaKnown RBP5.51□□□□□ -1.53
EPHA3-203ENST00000494014 TRBV19A0A075B6N1 114 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 F8VRH5 84 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 H7C1H1 209 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 ZNF833PQ6ZTB9 187 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 TRAV8-2A0A0B4J237 113 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 CGB1A6NKQ9 187 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 SH2D1AO60880 128 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 TCL1BO95988 128 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 IGHV3-48P01763 117 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 LGALS1P09382 135 aaKnown RBP5.51□□□□□ -1.53
EPHA3-203ENST00000494014 IGLC6P0CF74 106 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 PRTN3P24158 256 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 RNF185Q96GF1 192 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 NGBQ9NPG2 151 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 RPUSD1Q9UJJ7 312 aaKnown RBP5.51□□□□□ -1.53
EPHA3-203ENST00000494014 FZR1Q9UM11 496 aa5.51□□□□□ -1.53
EPHA3-203ENST00000494014 TRAV4A0A0B4J268 109 aa5.5□□□□□ -1.53
EPHA3-203ENST00000494014 E7EUB6 86 aa5.5□□□□□ -1.53
EPHA3-203ENST00000494014 MAGEA5P43359 124 aa5.5□□□□□ -1.53
EPHA3-203ENST00000494014 C5orf47Q569G3 176 aa5.5□□□□□ -1.53
EPHA3-203ENST00000494014 MEIG1Q5JSS6 88 aa5.5□□□□□ -1.53
EPHA3-203ENST00000494014 UTF1Q5T230 341 aa5.5□□□□□ -1.53
EPHA3-203ENST00000494014 TMEM78Q5T7P6 136 aa5.5□□□□□ -1.53
EPHA3-203ENST00000494014 FAM159AQ6UWV7 190 aa5.5□□□□□ -1.53
EPHA3-203ENST00000494014 SIGLEC15Q6ZMC9 328 aa5.5□□□□□ -1.53
EPHA3-203ENST00000494014 ZFP2Q6ZN57 461 aa5.5□□□□□ -1.53
EPHA3-203ENST00000494014 Q71RC1 249 aaPredicted RBP5.5□□□□□ -1.53
EPHA3-203ENST00000494014 ZNRF1Q8ND25 227 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 558.9 ms