RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 OR10J3Q5JRS4 329 aa9.36□□□□□ -0.91
PRPF40A-211ENST00000493468 TRIM63Q969Q1 353 aa9.36□□□□□ -0.91
PRPF40A-211ENST00000493468 AAMDCQ9H7C9 122 aa9.36□□□□□ -0.91
PRPF40A-211ENST00000493468 TIMM9Q9Y5J7 89 aa9.36□□□□□ -0.91
PRPF40A-211ENST00000493468 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 TRGV11A0A075B6L2 103 aa9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 IGKV2-40A0A087WW87 121 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 IGKV2D-40P01614 121 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 IGHV3-30P01768 117 aa9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 IGHV3-33P01772 117 aa9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 IGHV3-30-3P0DP02 117 aa9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 IGHV3-30-5P0DP03 117 aa9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 GATA1P15976 413 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 ZNF266Q14584 549 aa9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 LELP1Q5T871 98 aa9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 NRARPQ7Z6K4 114 aa9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 EXOC3-AS1Q8N2X6 119 aa9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 OR4C5Q8NGB2 326 aa9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 MCFD2Q8NI22 146 aa9.35□□□□□ -0.91
PRPF40A-211ENST00000493468 TRAV8-3A0A0A6YYJ7 113 aa9.34□□□□□ -0.91
PRPF40A-211ENST00000493468 FABP12A6NFH5 140 aa9.34□□□□□ -0.91
PRPF40A-211ENST00000493468 ZNF138P52744 262 aa9.34□□□□□ -0.91
PRPF40A-211ENST00000493468 SPCS2Q15005 226 aa9.34□□□□□ -0.91
PRPF40A-211ENST00000493468 LINC01620Q4KN68 170 aa9.34□□□□□ -0.91
PRPF40A-211ENST00000493468 MUC21Q5SSG8 566 aa9.34□□□□□ -0.91
PRPF40A-211ENST00000493468 MIC13Q5XKP0 118 aa9.34□□□□□ -0.91
PRPF40A-211ENST00000493468 TNXBP22105 4242 aa9.33□□□□□ -0.92
PRPF40A-211ENST00000493468 C9orf170A2RU37 121 aa9.33□□□□□ -0.92
PRPF40A-211ENST00000493468 LECT2O14960 151 aa9.33□□□□□ -0.92
PRPF40A-211ENST00000493468 IGLV2-11P01706 119 aa9.33□□□□□ -0.92
PRPF40A-211ENST00000493468 MT1HL1P0DM35 61 aa9.33□□□□□ -0.92
PRPF40A-211ENST00000493468 RPL29P47914 159 aaKnown RBP9.33□□□□□ -0.92
PRPF40A-211ENST00000493468 TMEM183BQ1AE95 376 aa9.33□□□□□ -0.92
PRPF40A-211ENST00000493468 Q6AWC8 147 aa9.33□□□□□ -0.92
PRPF40A-211ENST00000493468 TMEM183AQ8IXX5 376 aa9.33□□□□□ -0.92
PRPF40A-211ENST00000493468 TOMM5Q8N4H5 51 aa9.33□□□□□ -0.92
PRPF40A-211ENST00000493468 WDR83OSQ9Y284 106 aa9.33□□□□□ -0.92
PRPF40A-211ENST00000493468 COX11Q9Y6N1 276 aa9.33□□□□□ -0.92
PRPF40A-211ENST00000493468 C7orf66A4D0T2 115 aa9.32□□□□□ -0.92
PRPF40A-211ENST00000493468 M0R2P5 195 aa9.32□□□□□ -0.92
PRPF40A-211ENST00000493468 SCGB1D2O95969 90 aa9.32□□□□□ -0.92
PRPF40A-211ENST00000493468 PYYP10082 97 aa9.32□□□□□ -0.92
PRPF40A-211ENST00000493468 BAK1Q16611 211 aa9.32□□□□□ -0.92
PRPF40A-211ENST00000493468 TOR2AQ5JU69 321 aa9.32□□□□□ -0.92
PRPF40A-211ENST00000493468 DYNC2LI1Q8TCX1 351 aa9.32□□□□□ -0.92
PRPF40A-211ENST00000493468 SLC39A9Q9NUM3 307 aa9.32□□□□□ -0.92
PRPF40A-211ENST00000493468 RBAKDNA6NC62 111 aa9.31□□□□□ -0.92
PRPF40A-211ENST00000493468 RBFOX3A6NFN3 312 aa9.31□□□□□ -0.92
PRPF40A-211ENST00000493468 RPL37AP61513 92 aaKnown RBP9.31□□□□□ -0.92
PRPF40A-211ENST00000493468 IAH1Q2TAA2 248 aaPredicted RBP9.31□□□□□ -0.92
PRPF40A-211ENST00000493468 FAM122CQ6P4D5 195 aa9.31□□□□□ -0.92
PRPF40A-211ENST00000493468 FAM159AQ6UWV7 190 aa9.31□□□□□ -0.92
PRPF40A-211ENST00000493468 Q8N976 141 aa9.31□□□□□ -0.92
PRPF40A-211ENST00000493468 ATP6V0E2Q8NHE4 81 aa9.31□□□□□ -0.92
PRPF40A-211ENST00000493468 Q8TAT8 98 aa9.31□□□□□ -0.92
PRPF40A-211ENST00000493468 CHAC2Q8WUX2 184 aa9.31□□□□□ -0.92
PRPF40A-211ENST00000493468 GTSF1LQ9H1H1 148 aa9.31□□□□□ -0.92
PRPF40A-211ENST00000493468 TRBV6-4A0A1B0GX49 114 aa9.3□□□□□ -0.92
PRPF40A-211ENST00000493468 CIDEAO60543 219 aa9.3□□□□□ -0.92
PRPF40A-211ENST00000493468 SMIM18P0DKX4 95 aa9.3□□□□□ -0.92
PRPF40A-211ENST00000493468 HNRNPA3P51991 378 aaKnown RBP9.3□□□□□ -0.92
PRPF40A-211ENST00000493468 RHOHQ15669 191 aa9.3□□□□□ -0.92
PRPF40A-211ENST00000493468 VWC2Q2TAL6 325 aa9.3□□□□□ -0.92
PRPF40A-211ENST00000493468 SLC25A29Q8N8R3 303 aa9.3□□□□□ -0.92
PRPF40A-211ENST00000493468 PRADC1Q9BSG0 188 aa9.3□□□□□ -0.92
PRPF40A-211ENST00000493468 C20orf85Q9H1P6 137 aa9.3□□□□□ -0.92
PRPF40A-211ENST00000493468 UQCC1Q9NVA1 299 aa9.3□□□□□ -0.92
PRPF40A-211ENST00000493468 LENEPQ9Y5L5 61 aa9.3□□□□□ -0.92
PRPF40A-211ENST00000493468 IGHV3-16A0A0C4DH30 117 aa9.29□□□□□ -0.92
PRPF40A-211ENST00000493468 RNF222A6NCQ9 220 aa9.29□□□□□ -0.92
PRPF40A-211ENST00000493468 FBLL1A6NHQ2 334 aaKnown RBP9.29□□□□□ -0.92
PRPF40A-211ENST00000493468 BAALCQ8WXS3 180 aa9.29□□□□□ -0.92
PRPF40A-211ENST00000493468 DAZAP1Q96EP5 407 aaKnown RBP9.29□□□□□ -0.92
PRPF40A-211ENST00000493468 SH3BGRL3Q9H299 93 aa9.29□□□□□ -0.92
PRPF40A-211ENST00000493468 GPN1Q9HCN4 374 aaPredicted RBP9.29□□□□□ -0.92
PRPF40A-211ENST00000493468 MBPP02686 304 aaPredicted RBP9.28□□□□□ -0.92
PRPF40A-211ENST00000493468 RMI2Q96E14 147 aa9.28□□□□□ -0.92
PRPF40A-211ENST00000493468 SLC25A2Q9BXI2 301 aa9.28□□□□□ -0.92
PRPF40A-211ENST00000493468 GGTLC3B5MD39 225 aa9.27□□□□□ -0.93
PRPF40A-211ENST00000493468 NBEAP1P0C6P0 100 aa9.27□□□□□ -0.93
PRPF40A-211ENST00000493468 Q8N3U1 123 aa9.27□□□□□ -0.93
PRPF40A-211ENST00000493468 FAM167A-AS1Q96KT0 104 aa9.27□□□□□ -0.93
PRPF40A-211ENST00000493468 SLIRPQ9GZT3 109 aaKnown RBP9.27□□□□□ -0.93
PRPF40A-211ENST00000493468 L7N2F9 121 aa9.26□□□□□ -0.93
PRPF40A-211ENST00000493468 NDUFB6O95139 128 aa9.26□□□□□ -0.93
PRPF40A-211ENST00000493468 VAMP2P63027 116 aa9.26□□□□□ -0.93
PRPF40A-211ENST00000493468 BAXQ07812 192 aa9.26□□□□□ -0.93
PRPF40A-211ENST00000493468 PYDC2Q56P42 97 aa9.26□□□□□ -0.93
PRPF40A-211ENST00000493468 DAZ4Q86SG3 579 aaKnown RBP9.26□□□□□ -0.93
PRPF40A-211ENST00000493468 TMED6Q8WW62 240 aa9.26□□□□□ -0.93
PRPF40A-211ENST00000493468 BCL7BQ9BQE9 202 aa9.26□□□□□ -0.93
PRPF40A-211ENST00000493468 DAZ3Q9NR90 486 aaKnown RBP9.26□□□□□ -0.93
PRPF40A-211ENST00000493468 GSKIPQ9P0R6 139 aa9.26□□□□□ -0.93
PRPF40A-211ENST00000493468 TRAV8-1A0A0A6YYK1 113 aa9.25□□□□□ -0.93
PRPF40A-211ENST00000493468 UBE2L5PA0A1B0GUS4 154 aa9.25□□□□□ -0.93
PRPF40A-211ENST00000493468 CST7O76096 145 aa9.25□□□□□ -0.93
PRPF40A-211ENST00000493468 CSN1S1P47710 185 aa9.25□□□□□ -0.93
PRPF40A-211ENST00000493468 Q6ZRU5 148 aa9.25□□□□□ -0.93
PRPF40A-211ENST00000493468 ATP5SQ99766 215 aa9.25□□□□□ -0.93
PRPF40A-211ENST00000493468 PAXXQ9BUH6 204 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms