RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 TMEM183AQ8IXX5 376 aa6.61□□□□□ -1.35
TM4SF1-203ENST00000493298 ZNF738Q8NE65 137 aa6.61□□□□□ -1.35
TM4SF1-203ENST00000493298 ISOC2Q96AB3 205 aa6.61□□□□□ -1.35
TM4SF1-203ENST00000493298 RCHY1Q96PM5 261 aa6.61□□□□□ -1.35
TM4SF1-203ENST00000493298 AAMDCQ9H7C9 122 aa6.61□□□□□ -1.35
TM4SF1-203ENST00000493298 KMT2AQ03164 3969 aa6.61□□□□□ -1.35
TM4SF1-203ENST00000493298 OR4C46A6NHA9 309 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 KLLNB2CW77 178 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 HLA-DRB4P13762 266 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 CRISP2P16562 243 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 BMI1P35226 326 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 ZNF138P52744 262 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 HIST1H1AQ02539 215 aaPredicted RBP6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 FOXI2Q6ZQN5 318 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 BAGE2Q86Y30 109 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 DEFB125Q8N687 156 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 CLRN3Q8NCR9 226 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 FMC1Q96HJ9 113 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 FAM110AQ9BQ89 295 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 CLEC5AQ9NY25 188 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 NAT8Q9UHE5 227 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 LY96Q9Y6Y9 160 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 HLA-DRB4X5D2U9 266 aa6.6□□□□□ -1.35
TM4SF1-203ENST00000493298 C7orf77A4D0Y5 90 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 ZNF324O75467 553 aaPredicted RBP6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 IGKV3-20P01619 116 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 APOC3P02656 99 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 PRM2P04554 102 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 ID1P41134 155 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 FAM74A3Q4VXF1 159 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 ACTL10Q5JWF8 245 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 CSNK1G2-AS1Q8NCQ2 148 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 NUDT10Q8NFP7 164 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 CMTM2Q8TAZ6 248 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 NUDT11Q96G61 164 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 LINC00477Q96M19 166 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 CLUHP3Q96NS8 147 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 RNASE7Q9H1E1 156 aaKnown RBP6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 V9GYV3 84 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 VPS13DQ5THJ4 4388 aa6.59□□□□□ -1.35
TM4SF1-203ENST00000493298 EPPK1P58107 5090 aaKnown RBP6.58□□□□□ -1.36
TM4SF1-203ENST00000493298 IGKV3D-20A0A0C4DH25 116 aa6.58□□□□□ -1.36
TM4SF1-203ENST00000493298 SERTM2A0A1B0GWG4 89 aa6.58□□□□□ -1.36
TM4SF1-203ENST00000493298 GNG4P50150 75 aa6.58□□□□□ -1.36
TM4SF1-203ENST00000493298 FXYD7P58549 80 aa6.58□□□□□ -1.36
TM4SF1-203ENST00000493298 PAFAH1B2P68402 229 aa6.58□□□□□ -1.36
TM4SF1-203ENST00000493298 RPL19P84098 196 aaKnown RBP6.58□□□□□ -1.36
TM4SF1-203ENST00000493298 BTN1A1Q13410 526 aa6.58□□□□□ -1.36
TM4SF1-203ENST00000493298 CASC10Q5T4H9 136 aa6.58□□□□□ -1.36
TM4SF1-203ENST00000493298 RETNQ9HD89 108 aa6.58□□□□□ -1.36
TM4SF1-203ENST00000493298 ZFP30Q9Y2G7 519 aa6.58□□□□□ -1.36
TM4SF1-203ENST00000493298 M0R2Z0 102 aa6.57□□□□□ -1.36
TM4SF1-203ENST00000493298 SH2D1AO60880 128 aa6.57□□□□□ -1.36
TM4SF1-203ENST00000493298 CA1P00915 261 aaPredicted RBP6.57□□□□□ -1.36
TM4SF1-203ENST00000493298 S100A9P06702 114 aaKnown RBP6.57□□□□□ -1.36
TM4SF1-203ENST00000493298 CSN1S1P47710 185 aa6.57□□□□□ -1.36
TM4SF1-203ENST00000493298 SNRPD3P62318 126 aaKnown RBP6.57□□□□□ -1.36
TM4SF1-203ENST00000493298 RNF212Q495C1 297 aa6.57□□□□□ -1.36
TM4SF1-203ENST00000493298 GFI1BQ5VTD9 330 aa6.57□□□□□ -1.36
TM4SF1-203ENST00000493298 SAMD13Q5VXD3 122 aa6.57□□□□□ -1.36
TM4SF1-203ENST00000493298 C1orf158Q8N1D5 194 aa6.57□□□□□ -1.36
TM4SF1-203ENST00000493298 MUC7Q8TAX7 377 aa6.57□□□□□ -1.36
TM4SF1-203ENST00000493298 GTSF1Q8WW33 167 aa6.57□□□□□ -1.36
TM4SF1-203ENST00000493298 ODF3Q96PU9 254 aa6.57□□□□□ -1.36
TM4SF1-203ENST00000493298 TRAV12-2A0A075B6T6 113 aa6.56□□□□□ -1.36
TM4SF1-203ENST00000493298 TRBV7-9A0A0J9YWB2 115 aa6.56□□□□□ -1.36
TM4SF1-203ENST00000493298 OR11H12B2RN74 326 aa6.56□□□□□ -1.36
TM4SF1-203ENST00000493298 PFN1P07737 140 aaKnown RBP6.56□□□□□ -1.36
TM4SF1-203ENST00000493298 ADIRFQ15847 76 aa6.56□□□□□ -1.36
TM4SF1-203ENST00000493298 SPINK13Q1W4C9 94 aa6.56□□□□□ -1.36
TM4SF1-203ENST00000493298 Q6AWC8 147 aa6.56□□□□□ -1.36
TM4SF1-203ENST00000493298 FAM231DQ6ZW35 169 aa6.56□□□□□ -1.36
TM4SF1-203ENST00000493298 OR10J6PQ8NGY7 276 aa6.56□□□□□ -1.36
TM4SF1-203ENST00000493298 NIPSNAP3BQ9BS92 247 aa6.56□□□□□ -1.36
TM4SF1-203ENST00000493298 LENEPQ9Y5L5 61 aa6.56□□□□□ -1.36
TM4SF1-203ENST00000493298 DNAH6Q9C0G6 4158 aa6.55□□□□□ -1.36
TM4SF1-203ENST00000493298 C3orf84H3BNL1 204 aa6.55□□□□□ -1.36
TM4SF1-203ENST00000493298 J3KRW8 73 aa6.55□□□□□ -1.36
TM4SF1-203ENST00000493298 SPRY2O43597 315 aa6.55□□□□□ -1.36
TM4SF1-203ENST00000493298 GZMBP10144 247 aa6.55□□□□□ -1.36
TM4SF1-203ENST00000493298 S100A1P23297 94 aa6.55□□□□□ -1.36
TM4SF1-203ENST00000493298 RNASE4P34096 147 aaKnown RBP6.55□□□□□ -1.36
TM4SF1-203ENST00000493298 UBE2G1P62253 170 aa6.55□□□□□ -1.36
TM4SF1-203ENST00000493298 GTSCR1Q86UQ5 136 aa6.55□□□□□ -1.36
TM4SF1-203ENST00000493298 OR4B1Q8NGF8 309 aa6.55□□□□□ -1.36
TM4SF1-203ENST00000493298 SMIM12Q96EX1 92 aa6.55□□□□□ -1.36
TM4SF1-203ENST00000493298 OSTCQ9NRP0 149 aa6.55□□□□□ -1.36
TM4SF1-203ENST00000493298 TP53TG3Q9ULZ0 132 aa6.55□□□□□ -1.36
TM4SF1-203ENST00000493298 MUC4Q99102 2169 aa6.54□□□□□ -1.36
TM4SF1-203ENST00000493298 FBLL1A6NHQ2 334 aaKnown RBP6.54□□□□□ -1.36
TM4SF1-203ENST00000493298 GNRH2O43555 120 aa6.54□□□□□ -1.36
TM4SF1-203ENST00000493298 MGST1P10620 155 aaKnown RBP6.54□□□□□ -1.36
TM4SF1-203ENST00000493298 RPL35AP18077 110 aaKnown RBP6.54□□□□□ -1.36
TM4SF1-203ENST00000493298 SAPCD1Q5SSQ6 148 aa6.54□□□□□ -1.36
TM4SF1-203ENST00000493298 TMEM78Q5T7P6 136 aa6.54□□□□□ -1.36
TM4SF1-203ENST00000493298 EBLN2Q6P2I7 272 aa6.54□□□□□ -1.36
TM4SF1-203ENST00000493298 CBLN2Q8IUK8 224 aa6.54□□□□□ -1.36
TM4SF1-203ENST00000493298 SFRP2Q96HF1 295 aa6.54□□□□□ -1.36
TM4SF1-203ENST00000493298 SPATA25Q9BR10 227 aa6.54□□□□□ -1.36
TM4SF1-203ENST00000493298 SRD5A3Q9H8P0 318 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms