RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ATP6V0CP27449 155 aa6.43□□□□□ -1.38
HDAC6-232ENST00000489053 SERF2P84101 59 aa6.43□□□□□ -1.38
HDAC6-232ENST00000489053 ZFP69Q49AA0 526 aa6.43□□□□□ -1.38
HDAC6-232ENST00000489053 MUC21Q5SSG8 566 aa6.43□□□□□ -1.38
HDAC6-232ENST00000489053 AKR1C8PQ5T2L2 129 aa6.43□□□□□ -1.38
HDAC6-232ENST00000489053 Q6ZTI0 123 aa6.43□□□□□ -1.38
HDAC6-232ENST00000489053 OR2G3Q8NGZ4 309 aa6.43□□□□□ -1.38
HDAC6-232ENST00000489053 LINC00467Q9BRT7 94 aa6.43□□□□□ -1.38
HDAC6-232ENST00000489053 TMEM167BQ9NRX6 74 aa6.43□□□□□ -1.38
HDAC6-232ENST00000489053 SERTM2A0A1B0GWG4 89 aa6.42□□□□□ -1.38
HDAC6-232ENST00000489053 ARPC5O15511 151 aa6.42□□□□□ -1.38
HDAC6-232ENST00000489053 ZNF324O75467 553 aaPredicted RBP6.42□□□□□ -1.38
HDAC6-232ENST00000489053 TCL1AP56279 114 aa6.42□□□□□ -1.38
HDAC6-232ENST00000489053 LGALS9BQ3B8N2 356 aa6.42□□□□□ -1.38
HDAC6-232ENST00000489053 IBA57Q5T440 356 aaKnown RBP6.42□□□□□ -1.38
HDAC6-232ENST00000489053 ZFAND2AQ8N6M9 145 aa6.42□□□□□ -1.38
HDAC6-232ENST00000489053 RAB24Q969Q5 203 aa6.42□□□□□ -1.38
HDAC6-232ENST00000489053 ZNF503Q96F45 646 aa6.42□□□□□ -1.38
HDAC6-232ENST00000489053 FAM19A4Q96LR4 140 aa6.42□□□□□ -1.38
HDAC6-232ENST00000489053 TMPRSS5Q9H3S3 457 aa6.42□□□□□ -1.38
HDAC6-232ENST00000489053 TREM1Q9NP99 234 aa6.42□□□□□ -1.38
HDAC6-232ENST00000489053 TNFSF18Q9UNG2 199 aa6.42□□□□□ -1.38
HDAC6-232ENST00000489053 LENEPQ9Y5L5 61 aa6.42□□□□□ -1.38
HDAC6-232ENST00000489053 HECTD4Q9Y4D8 3996 aa6.42□□□□□ -1.38
HDAC6-232ENST00000489053 TRAV21A0A0B4J279 112 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 TAAR5O14804 337 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 IFNA7P01567 189 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 GCHFRP30047 84 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 PPT1P50897 306 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 SLAQ13239 276 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 TMEM183BQ1AE95 376 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 C1orf134Q5TEV5 83 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 RPL7L1Q6DKI1 246 aaKnown RBP6.41□□□□□ -1.38
HDAC6-232ENST00000489053 SSX7Q7RTT5 188 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 TMEM183AQ8IXX5 376 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 C5orf17Q8NAS9 161 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 PCNPQ8WW12 178 aaKnown RBP6.41□□□□□ -1.38
HDAC6-232ENST00000489053 TMED6Q8WW62 240 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 ST6GAL2Q96JF0 529 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 SH3BGRL3Q9H299 93 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 SDF2L1Q9HCN8 221 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 KLF12Q9Y4X4 402 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 FRAS1Q86XX4 4008 aa6.41□□□□□ -1.38
HDAC6-232ENST00000489053 TRGV4A0A0C4DH28 118 aa6.4□□□□□ -1.38
HDAC6-232ENST00000489053 PRSS29PA6NIE9 313 aa6.4□□□□□ -1.38
HDAC6-232ENST00000489053 IGHV3-53P01767 116 aa6.4□□□□□ -1.38
HDAC6-232ENST00000489053 STAG3L2P0CL84 134 aa6.4□□□□□ -1.38
HDAC6-232ENST00000489053 STAG3L3P0CL85 134 aa6.4□□□□□ -1.38
HDAC6-232ENST00000489053 GNG5P63218 68 aa6.4□□□□□ -1.38
HDAC6-232ENST00000489053 PRR9Q5T870 116 aa6.4□□□□□ -1.38
HDAC6-232ENST00000489053 ARL6IP6Q8N6S5 226 aa6.4□□□□□ -1.38
HDAC6-232ENST00000489053 STOML3Q8TAV4 291 aa6.4□□□□□ -1.38
HDAC6-232ENST00000489053 KCNS1Q96KK3 526 aa6.4□□□□□ -1.38
HDAC6-232ENST00000489053 SPXQ9BT56 116 aa6.4□□□□□ -1.38
HDAC6-232ENST00000489053 MRPL16Q9NX20 251 aaKnown RBP6.4□□□□□ -1.38
HDAC6-232ENST00000489053 TP53TG3Q9ULZ0 132 aa6.4□□□□□ -1.38
HDAC6-232ENST00000489053 DNAH2Q9P225 4427 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 TRAV8-1A0A0A6YYK1 113 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 CTXND1A0A1B0GTU2 59 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 FBLL1A6NHQ2 334 aaKnown RBP6.39□□□□□ -1.39
HDAC6-232ENST00000489053 F6UZH7 168 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 PAX4O43316 350 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 SPINK4O60575 86 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 HOXA5P20719 270 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 Q5BKY6 102 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 TTC32Q5I0X7 151 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 Q6AWC8 147 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 LINC00612Q8N6U2 182 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 CYB561D1Q8N8Q1 229 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 C11orf72Q8NBR9 251 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 ICOSQ9Y6W8 199 aa6.39□□□□□ -1.39
HDAC6-232ENST00000489053 NBDYA0A0U1RRE5 68 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 KANTRA0A1W2PQU2 76 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 RNF222A6NCQ9 220 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 H3BNG1 76 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 PFDN1O60925 122 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 TCRAP04437 139 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 UBE2G2P60604 165 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 SUMO1P63165 101 aaKnown RBP6.38□□□□□ -1.39
HDAC6-232ENST00000489053 SMUG1Q53HV7 270 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 SAPCD1Q5SSQ6 148 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 PRNTQ86SH4 94 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 SGK494Q96LW2 274 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 C18orf15Q96N68 181 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 C8orf49Q96NF6 230 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 NKX6-2Q9C056 277 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-232ENST00000489053 PRO0255Q9UI72 69 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 HHLA3Q9XRX5 114 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 LINC00588Q9Y4M8 146 aa6.38□□□□□ -1.39
HDAC6-232ENST00000489053 SRIP30626 198 aa6.37□□□□□ -1.39
HDAC6-232ENST00000489053 EIF5AP63241 154 aaKnown RBP6.37□□□□□ -1.39
HDAC6-232ENST00000489053 FLI1Q01543 452 aaPredicted RBP6.37□□□□□ -1.39
HDAC6-232ENST00000489053 OR4C5Q8NGB2 326 aa6.37□□□□□ -1.39
HDAC6-232ENST00000489053 Q9H8V8 135 aa6.37□□□□□ -1.39
HDAC6-232ENST00000489053 MDFICQ9P1T7 246 aa6.37□□□□□ -1.39
HDAC6-232ENST00000489053 EPDR1Q9UM22 224 aa6.37□□□□□ -1.39
HDAC6-232ENST00000489053 PSG8Q9UQ74 426 aa6.37□□□□□ -1.39
HDAC6-232ENST00000489053 A0A1W2PRE2 83 aa6.36□□□□□ -1.39
HDAC6-232ENST00000489053 MAP1LC3B2A6NCE7 125 aa6.36□□□□□ -1.39
HDAC6-232ENST00000489053 C9JCJ5 164 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms