RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SAMD5Q5TGI4 173 aa14.61□□□□□ -0.07
CCM2-216ENST00000488727 C16orf54Q6UWD8 224 aa14.61□□□□□ -0.07
CCM2-216ENST00000488727 C17orf77Q96MU5 243 aa14.61□□□□□ -0.07
CCM2-216ENST00000488727 HIGD1CA8MV81 97 aa14.6□□□□□ -0.07
CCM2-216ENST00000488727 K7EMT4 169 aa14.6□□□□□ -0.07
CCM2-216ENST00000488727 K7EQM0 130 aa14.6□□□□□ -0.07
CCM2-216ENST00000488727 SERF1AO75920 110 aa14.6□□□□□ -0.07
CCM2-216ENST00000488727 APCSP02743 223 aa14.6□□□□□ -0.07
CCM2-216ENST00000488727 RAB4BP61018 213 aa14.6□□□□□ -0.07
CCM2-216ENST00000488727 PKIAP61925 76 aa14.6□□□□□ -0.07
CCM2-216ENST00000488727 SIGLEC8Q9NYZ4 499 aa14.6□□□□□ -0.07
CCM2-216ENST00000488727 ZFP30Q9Y2G7 519 aa14.6□□□□□ -0.07
CCM2-216ENST00000488727 SERTM2A0A1B0GWG4 89 aa14.59□□□□□ -0.07
CCM2-216ENST00000488727 WIPF1O43516 503 aa14.59□□□□□ -0.07
CCM2-216ENST00000488727 RPL7P18124 248 aaKnown RBP14.59□□□□□ -0.07
CCM2-216ENST00000488727 BAGE3Q86Y29 109 aa14.59□□□□□ -0.07
CCM2-216ENST00000488727 SELENOKQ9Y6D0 94 aa14.59□□□□□ -0.07
CCM2-216ENST00000488727 TRAV8-1A0A0A6YYK1 113 aa14.58□□□□□ -0.07
CCM2-216ENST00000488727 DIRC3C9JPN6 131 aa14.58□□□□□ -0.07
CCM2-216ENST00000488727 INSL3P51460 131 aa14.58□□□□□ -0.07
CCM2-216ENST00000488727 PSG9Q00887 426 aa14.58□□□□□ -0.07
CCM2-216ENST00000488727 PRNTQ86SH4 94 aa14.58□□□□□ -0.07
CCM2-216ENST00000488727 DAZAP1Q96EP5 407 aaKnown RBP14.58□□□□□ -0.07
CCM2-216ENST00000488727 RABAC1Q9UI14 185 aa14.58□□□□□ -0.07
CCM2-216ENST00000488727 NBEAL1Q6ZS30 2694 aa14.58□□□□□ -0.08
CCM2-216ENST00000488727 ZNF253O75346 499 aa14.58□□□□□ -0.08
CCM2-216ENST00000488727 PSG3Q16557 428 aa14.58□□□□□ -0.08
CCM2-216ENST00000488727 IQCJQ1A5X6 159 aa14.58□□□□□ -0.08
CCM2-216ENST00000488727 AAMDCQ9H7C9 122 aa14.58□□□□□ -0.08
CCM2-216ENST00000488727 NOTCH1P46531 2555 aa14.57□□□□□ -0.08
CCM2-216ENST00000488727 IGHV3-49A0A0A0MS15 119 aa14.57□□□□□ -0.08
CCM2-216ENST00000488727 IGLV1-51P01701 117 aa14.57□□□□□ -0.08
CCM2-216ENST00000488727 GDF5OSQ5U4N7 250 aa14.57□□□□□ -0.08
CCM2-216ENST00000488727 PSG8Q9UQ74 426 aa14.57□□□□□ -0.08
CCM2-216ENST00000488727 IGHV3OR16-13A0A075B7E8 117 aa14.56□□□□□ -0.08
CCM2-216ENST00000488727 IGHV3-74A0A0B4J1X5 117 aa14.56□□□□□ -0.08
CCM2-216ENST00000488727 IGHV7-4-1A0A0J9YVY3 117 aa14.56□□□□□ -0.08
CCM2-216ENST00000488727 F2Z2F3 143 aa14.56□□□□□ -0.08
CCM2-216ENST00000488727 APOHP02749 345 aaPredicted RBP14.56□□□□□ -0.08
CCM2-216ENST00000488727 SRIP30626 198 aa14.56□□□□□ -0.08
CCM2-216ENST00000488727 SLAQ13239 276 aa14.56□□□□□ -0.08
CCM2-216ENST00000488727 SMPXQ9UHP9 88 aa14.56□□□□□ -0.08
CCM2-216ENST00000488727 TSTD3H0UI37 97 aa14.55□□□□□ -0.08
CCM2-216ENST00000488727 KIAA1644Q3SXP7 199 aa14.55□□□□□ -0.08
CCM2-216ENST00000488727 GTSF1Q8WW33 167 aa14.55□□□□□ -0.08
CCM2-216ENST00000488727 FBLL1A6NHQ2 334 aaKnown RBP14.55□□□□□ -0.08
CCM2-216ENST00000488727 HBBP68871 147 aa14.55□□□□□ -0.08
CCM2-216ENST00000488727 RBPMS2Q6ZRY4 209 aaKnown RBP14.55□□□□□ -0.08
CCM2-216ENST00000488727 TCF24Q7RTU0 167 aa14.55□□□□□ -0.08
CCM2-216ENST00000488727 METTL26Q96S19 204 aa14.55□□□□□ -0.08
CCM2-216ENST00000488727 ZNF785A8K8V0 405 aa14.54□□□□□ -0.08
CCM2-216ENST00000488727 CHEK1O14757 476 aa14.54□□□□□ -0.08
CCM2-216ENST00000488727 EGFEM1PQ0D2K5 195 aa14.54□□□□□ -0.08
CCM2-216ENST00000488727 DEFB114Q30KQ6 69 aa14.54□□□□□ -0.08
CCM2-216ENST00000488727 DYNLRB2Q8TF09 96 aa14.54□□□□□ -0.08
CCM2-216ENST00000488727 ZC2HC1AQ96GY0 325 aa14.54□□□□□ -0.08
CCM2-216ENST00000488727 KCNS1Q96KK3 526 aa14.54□□□□□ -0.08
CCM2-216ENST00000488727 RHPN1-AS1Q9BWJ2 59 aa14.54□□□□□ -0.08
CCM2-216ENST00000488727 IGHV3-66A0A0C4DH42 116 aa14.53□□□□□ -0.08
CCM2-216ENST00000488727 CSN1S1P47710 185 aa14.53□□□□□ -0.08
CCM2-216ENST00000488727 FOXA3P55318 350 aaPredicted RBP14.53□□□□□ -0.08
CCM2-216ENST00000488727 BEAN1Q3B7T3 259 aa14.53□□□□□ -0.08
CCM2-216ENST00000488727 CD300EQ496F6 205 aaPredicted RBP14.53□□□□□ -0.08
CCM2-216ENST00000488727 U3KQE9 123 aa14.53□□□□□ -0.08
CCM2-216ENST00000488727 A0A087X0K7 114 aa14.52□□□□□ -0.08
CCM2-216ENST00000488727 M0R3E3 92 aa14.52□□□□□ -0.08
CCM2-216ENST00000488727 KRTAP10-11P60412 298 aa14.52□□□□□ -0.08
CCM2-216ENST00000488727 Q6ZWC4 215 aa14.52□□□□□ -0.08
CCM2-216ENST00000488727 COX8CQ7Z4L0 72 aa14.52□□□□□ -0.08
CCM2-216ENST00000488727 SMAD5-AS1Q9Y6J3 95 aa14.52□□□□□ -0.08
CCM2-216ENST00000488727 KPRPQ5T749 579 aaPredicted RBP14.52□□□□□ -0.09
CCM2-216ENST00000488727 OR2D3Q8NGH3 330 aa14.52□□□□□ -0.09
CCM2-216ENST00000488727 C18orf32Q8TCD1 76 aa14.52□□□□□ -0.09
CCM2-216ENST00000488727 NAGKQ9UJ70 344 aa14.52□□□□□ -0.09
CCM2-216ENST00000488727 GPX1P07203 203 aa14.51□□□□□ -0.09
CCM2-216ENST00000488727 TMEM61Q8N0U2 210 aa14.51□□□□□ -0.09
CCM2-216ENST00000488727 SAMD10Q9BYL1 202 aa14.51□□□□□ -0.09
CCM2-216ENST00000488727 SORL1Q92673 2214 aa14.51□□□□□ -0.09
CCM2-216ENST00000488727 ZNF664Q8N3J9 261 aa14.5□□□□□ -0.09
CCM2-216ENST00000488727 PGLYRP4Q96LB8 373 aa14.5□□□□□ -0.09
CCM2-216ENST00000488727 RCHY1Q96PM5 261 aa14.5□□□□□ -0.09
CCM2-216ENST00000488727 ALKBH7Q9BT30 221 aaPredicted RBP14.5□□□□□ -0.09
CCM2-216ENST00000488727 A0A1W2PS18 150 aa14.49□□□□□ -0.09
CCM2-216ENST00000488727 BUB3O43684 328 aa14.49□□□□□ -0.09
CCM2-216ENST00000488727 SCGB1D1O95968 90 aa14.49□□□□□ -0.09
CCM2-216ENST00000488727 DDTP30046 118 aa14.49□□□□□ -0.09
CCM2-216ENST00000488727 CAMPP49913 170 aa14.49□□□□□ -0.09
CCM2-216ENST00000488727 Q6AWC8 147 aa14.49□□□□□ -0.09
CCM2-216ENST00000488727 GATD1Q8NB37 220 aa14.49□□□□□ -0.09
CCM2-216ENST00000488727 OR2K2Q8NGT1 345 aa14.49□□□□□ -0.09
CCM2-216ENST00000488727 PRO1933Q9H354 126 aa14.49□□□□□ -0.09
CCM2-216ENST00000488727 ZNF324O75467 553 aaPredicted RBP14.48□□□□□ -0.09
CCM2-216ENST00000488727 CRIP1P50238 77 aa14.48□□□□□ -0.09
CCM2-216ENST00000488727 C1orf194Q5T5A4 169 aa14.48□□□□□ -0.09
CCM2-216ENST00000488727 LCN12Q6JVE5 192 aa14.48□□□□□ -0.09
CCM2-216ENST00000488727 CT45A10P0DMU9 189 aa14.47□□□□□ -0.09
CCM2-216ENST00000488727 BMI1P35226 326 aa14.47□□□□□ -0.09
CCM2-216ENST00000488727 SAPCD1Q5SSQ6 148 aa14.47□□□□□ -0.09
CCM2-216ENST00000488727 GLMPQ8WWB7 406 aa14.47□□□□□ -0.09
CCM2-216ENST00000488727 SSBP4Q9BWG4 385 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms