RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 FAM53BQ14153 422 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 DIAPH2-AS1Q14236 149 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 EDDM3AQ14507 147 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 PMVKQ15126 192 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 TBC1D28Q2M2D7 210 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 CENPWQ5EE01 88 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 MEIG1Q5JSS6 88 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 GDF5OSQ5U4N7 250 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 ZNF818PQ6ZRF7 136 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 FAM19A1Q7Z5A9 133 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 VN1R4Q7Z5H5 301 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 LINC00596Q86U02 117 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 OSR2Q8N2R0 312 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 OBSL1O75147 1896 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 FANCMQ8IYD8 2048 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 TRBV7-7A0A0K0K1E9 115 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 FAM240AA0A1B0GVK7 77 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 LINC01546A6NGU7 62 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 C9JAW5 83 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 H3BP45 60 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 SNCGO76070 127 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 IGKV1-39P01597 117 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 IGKV1-5P01602 117 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 RBP4P02753 201 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 IGKV1D-39P04432 117 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 IGKV3-11P04433 115 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 INSL3P51460 131 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 DLX6P56179 175 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 DSCR4P56555 118 aaPredicted RBP2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 UBE2D3P61077 147 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 UBE2D2P62837 147 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 C12orf74Q32Q52 190 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 CLLU1OSQ5K130 101 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 SPANXN5Q5MJ07 72 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 MORN3Q6PF18 240 aaPredicted RBP2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 DGAT2L6Q6ZPD8 337 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 SSX8Q7RTT4 187 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 WFDC5Q8TCV5 224 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 RAB37Q96AX2 223 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 ZC2HC1AQ96GY0 325 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 CARD19Q96LW7 228 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 C18orf15Q96N68 181 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 HDHD3Q9BSH5 251 aaPredicted RBP2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 FBXL15Q9H469 300 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 HRASLS2Q9NWW9 162 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 ZNF492Q9P255 531 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 KLK12Q9UKR0 248 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 HIGD1AQ9Y241 93 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 Q9Y3F1 56 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 KLF12Q9Y4X4 402 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 V9GYY9 64 aa2.48□□□□□ -2.01
ECHDC1-217ENST00000488087 TRPM6Q9BX84 2022 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 SCN3AQ9NY46 2000 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 TRAV5A0A0B4J249 113 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 IGKV1D-13A0A0B4J2D9 117 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 TRBV6-1A0A0K0K1D8 114 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 NCBP2LA6PVI3 153 aaKnown RBP2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 A8MWL6 223 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 F5H768 121 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 UQCRQO14949 82 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 NPFFO15130 113 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 OR2H2O95918 312 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 NCR2O95944 276 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 ARL14EPLP0DKL9 152 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 IGKV1-13P0DP09 117 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 IAPPP10997 89 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 ZNF32P17041 273 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 CD70P32970 193 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 NMUP48645 174 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 SSR4P51571 173 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 FXYD2P54710 66 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 RBM11P57052 281 aaKnown RBP2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 TFF3Q07654 80 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 CCL15Q16663 113 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 TEX36Q5VZQ5 186 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 LINC00173Q6ZV60 143 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 FAM19A5Q7Z5A7 132 aaPredicted RBP2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 SRSF12Q8WXF0 261 aaKnown RBP2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 FAM104AQ969W3 186 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 LINC00526Q96FQ7 95 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 SPACA5Q96QH8 159 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 FOXC2Q99958 501 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 PRADC1Q9BSG0 188 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 CHAC1Q9BUX1 264 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 TP73-AS1Q9UF72 201 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 HILPDAQ9Y5L2 63 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 U3KQK5 164 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 KIAA1549LQ6ZVL6 1849 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 ARHGAP21Q5T5U3 1957 aa2.47□□□□□ -2.01
ECHDC1-217ENST00000488087 TRBV7-3A0A075B6L6 115 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 TMED7-TICAM2A0A0A6YYA0 188 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 IGKV1-6A0A0C4DH72 117 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 C19orf71A6NCJ1 209 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 A8MWV9 139 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 SMKR1H3BMG3 65 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 IGHV3-43DP0DP04 118 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 MGST1P10620 155 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 CRYGAP11844 174 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 FKBP2P26885 142 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms