RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 FXYD7P58549 80 aa11.52□□□□□ -0.57
APOE-205ENST00000485628 FAM74A3Q4VXF1 159 aa11.52□□□□□ -0.57
APOE-205ENST00000485628 CENPWQ5EE01 88 aa11.52□□□□□ -0.57
APOE-205ENST00000485628 GFI1BQ5VTD9 330 aa11.52□□□□□ -0.57
APOE-205ENST00000485628 Q6ZWC4 215 aa11.52□□□□□ -0.57
APOE-205ENST00000485628 BAGE2Q86Y30 109 aa11.52□□□□□ -0.57
APOE-205ENST00000485628 C1orf158Q8N1D5 194 aa11.52□□□□□ -0.57
APOE-205ENST00000485628 C20orf144Q9BQM9 153 aa11.52□□□□□ -0.57
APOE-205ENST00000485628 LY96Q9Y6Y9 160 aa11.52□□□□□ -0.57
APOE-205ENST00000485628 C7orf71A4D174 169 aa11.51□□□□□ -0.57
APOE-205ENST00000485628 DEFA6Q01524 100 aa11.51□□□□□ -0.57
APOE-205ENST00000485628 ZNF674Q2M3X9 581 aa11.51□□□□□ -0.57
APOE-205ENST00000485628 ZNF705AQ6ZN79 300 aaPredicted RBP11.51□□□□□ -0.57
APOE-205ENST00000485628 Q6ZQT7 251 aa11.51□□□□□ -0.57
APOE-205ENST00000485628 ZNF575Q86XF7 245 aa11.51□□□□□ -0.57
APOE-205ENST00000485628 OCC1Q8TAD7 63 aa11.51□□□□□ -0.57
APOE-205ENST00000485628 ZC2HC1AQ96GY0 325 aa11.51□□□□□ -0.57
APOE-205ENST00000485628 C1QTNF4Q9BXJ3 329 aa11.51□□□□□ -0.57
APOE-205ENST00000485628 XCL2Q9UBD3 114 aa11.51□□□□□ -0.57
APOE-205ENST00000485628 NBEAL2Q6ZNJ1 2754 aa11.5□□□□□ -0.57
APOE-205ENST00000485628 TRAV12-2A0A075B6T6 113 aa11.5□□□□□ -0.57
APOE-205ENST00000485628 TMEM218A2RU14 115 aa11.5□□□□□ -0.57
APOE-205ENST00000485628 CA1P00915 261 aaPredicted RBP11.5□□□□□ -0.57
APOE-205ENST00000485628 BTN1A1Q13410 526 aa11.5□□□□□ -0.57
APOE-205ENST00000485628 SMUG1Q53HV7 270 aa11.5□□□□□ -0.57
APOE-205ENST00000485628 C10orf91Q5T1B1 145 aa11.5□□□□□ -0.57
APOE-205ENST00000485628 SBSPONQ8IVN8 264 aa11.5□□□□□ -0.57
APOE-205ENST00000485628 DNAH9Q9NYC9 4486 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 PGPEP1LA6NFU8 196 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 K7EN84 100 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 GPX1P07203 203 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 SFTA3P0C7M3 94 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 ADCYAP1P18509 176 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 GNG4P50150 75 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 DEFB121Q5J5C9 76 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 SOHLH1Q5JUK2 328 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 MRAPQ8TCY5 172 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 RNF183Q96D59 192 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 SMIM7Q9BQ49 75 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 TM2D3Q9BRN9 247 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 LINC00467Q9BRT7 94 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 NDFIP1Q9BT67 221 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 TP53TG1Q9Y2A0 90 aa11.49□□□□□ -0.57
APOE-205ENST00000485628 ZNF727A8MUV8 499 aa11.48□□□□□ -0.57
APOE-205ENST00000485628 GCGP01275 180 aa11.48□□□□□ -0.57
APOE-205ENST00000485628 PFN1P07737 140 aaKnown RBP11.48□□□□□ -0.57
APOE-205ENST00000485628 RNASE4P34096 147 aaKnown RBP11.48□□□□□ -0.57
APOE-205ENST00000485628 TDRG1Q3Y452 100 aa11.48□□□□□ -0.57
APOE-205ENST00000485628 B9D2Q9BPU9 175 aa11.48□□□□□ -0.57
APOE-205ENST00000485628 SDF2L1Q9HCN8 221 aa11.48□□□□□ -0.57
APOE-205ENST00000485628 C11orf21Q9P2W6 132 aa11.48□□□□□ -0.57
APOE-205ENST00000485628 C19orf71A6NCJ1 209 aa11.47□□□□□ -0.57
APOE-205ENST00000485628 INSP01308 110 aa11.47□□□□□ -0.57
APOE-205ENST00000485628 NDUFA5Q16718 116 aa11.47□□□□□ -0.57
APOE-205ENST00000485628 LINC01551Q86U37 167 aa11.47□□□□□ -0.57
APOE-205ENST00000485628 TMEM256Q8N2U0 113 aa11.47□□□□□ -0.57
APOE-205ENST00000485628 NHLRC2Q8NBF2 726 aa11.47□□□□□ -0.57
APOE-205ENST00000485628 NEU1Q99519 415 aa11.47□□□□□ -0.57
APOE-205ENST00000485628 OVOL2Q9BRP0 275 aa11.47□□□□□ -0.57
APOE-205ENST00000485628 FBN3Q75N90 2809 aa11.46□□□□□ -0.57
APOE-205ENST00000485628 TRAV12-3A0A0B4J271 114 aa11.46□□□□□ -0.57
APOE-205ENST00000485628 FABP5P3A8MUU1 101 aa11.46□□□□□ -0.57
APOE-205ENST00000485628 TMEM241Q24JQ0 296 aa11.46□□□□□ -0.57
APOE-205ENST00000485628 SLC7A5P1Q8MH63 180 aa11.46□□□□□ -0.57
APOE-205ENST00000485628 SEC11CQ9BY50 192 aa11.46□□□□□ -0.57
APOE-205ENST00000485628 NAT8Q9UHE5 227 aa11.46□□□□□ -0.57
APOE-205ENST00000485628 X6R8D5 127 aa11.46□□□□□ -0.57
APOE-205ENST00000485628 TENM3Q9P273 2699 aa11.46□□□□□ -0.58
APOE-205ENST00000485628 HUWE1Q7Z6Z7 4374 aaKnown RBP11.46□□□□□ -0.58
APOE-205ENST00000485628 TRAV21A0A0B4J279 112 aa11.45□□□□□ -0.58
APOE-205ENST00000485628 J3KRW8 73 aa11.45□□□□□ -0.58
APOE-205ENST00000485628 CEBPGP53567 150 aa11.45□□□□□ -0.58
APOE-205ENST00000485628 RPL23P62829 140 aaKnown RBP11.45□□□□□ -0.58
APOE-205ENST00000485628 DEFB135Q30KP9 77 aa11.45□□□□□ -0.58
APOE-205ENST00000485628 FAM162BQ5T6X4 162 aa11.45□□□□□ -0.58
APOE-205ENST00000485628 H7BYZ3 331 aa11.44□□□□□ -0.58
APOE-205ENST00000485628 SH2D1AO60880 128 aa11.44□□□□□ -0.58
APOE-205ENST00000485628 OR5I1Q13606 314 aa11.44□□□□□ -0.58
APOE-205ENST00000485628 PYGO2Q9BRQ0 406 aa11.44□□□□□ -0.58
APOE-205ENST00000485628 TP53TG3Q9ULZ0 132 aa11.44□□□□□ -0.58
APOE-205ENST00000485628 CARHSP1Q9Y2V2 147 aaKnown RBP11.44□□□□□ -0.58
APOE-205ENST00000485628 COL7A1Q02388 2944 aa11.44□□□□□ -0.58
APOE-205ENST00000485628 IGKV3D-20A0A0C4DH25 116 aa11.43□□□□□ -0.58
APOE-205ENST00000485628 SPRY2O43597 315 aa11.43□□□□□ -0.58
APOE-205ENST00000485628 ANXA2RQ3ZCQ2 193 aa11.43□□□□□ -0.58
APOE-205ENST00000485628 LINC01559Q495D7 138 aa11.43□□□□□ -0.58
APOE-205ENST00000485628 FAM231DQ6ZW35 169 aa11.43□□□□□ -0.58
APOE-205ENST00000485628 RCHY1Q96PM5 261 aa11.43□□□□□ -0.58
APOE-205ENST00000485628 NIPSNAP3BQ9BS92 247 aa11.43□□□□□ -0.58
APOE-205ENST00000485628 BIN3Q9NQY0 253 aa11.43□□□□□ -0.58
APOE-205ENST00000485628 GOLT1BQ9Y3E0 138 aa11.43□□□□□ -0.58
APOE-205ENST00000485628 PLAC8L1A1L4L8 177 aa11.42□□□□□ -0.58
APOE-205ENST00000485628 SMIM9A6NGZ8 99 aa11.42□□□□□ -0.58
APOE-205ENST00000485628 DNLZQ5SXM8 178 aa11.42□□□□□ -0.58
APOE-205ENST00000485628 ISOC2Q96AB3 205 aa11.42□□□□□ -0.58
APOE-205ENST00000485628 IGHV1OR15-1A0A075B7D0 117 aa11.41□□□□□ -0.58
APOE-205ENST00000485628 KRBOX1C9JBD0 128 aa11.41□□□□□ -0.58
APOE-205ENST00000485628 PRM2P04554 102 aa11.41□□□□□ -0.58
APOE-205ENST00000485628 NUDT10Q8NFP7 164 aa11.41□□□□□ -0.58
APOE-205ENST00000485628 RNASE8Q8TDE3 154 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms