RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 LCE3BQ5TA77 95 aa9.17□□□□□ -0.94
UBA3-210ENST00000485424 SPATA12Q7Z6I5 190 aa9.17□□□□□ -0.94
UBA3-210ENST00000485424 C11orf72Q8NBR9 251 aa9.17□□□□□ -0.94
UBA3-210ENST00000485424 WDR61Q9GZS3 305 aaKnown RBP9.17□□□□□ -0.94
UBA3-210ENST00000485424 OR5AC2Q9NZP5 309 aa9.17□□□□□ -0.94
UBA3-210ENST00000485424 ZNF492Q9P255 531 aa9.17□□□□□ -0.94
UBA3-210ENST00000485424 KLF12Q9Y4X4 402 aa9.17□□□□□ -0.94
UBA3-210ENST00000485424 HERC1Q15751 4861 aa9.16□□□□□ -0.94
UBA3-210ENST00000485424 A0A096LPF7 62 aa9.16□□□□□ -0.94
UBA3-210ENST00000485424 SPINK4O60575 86 aa9.16□□□□□ -0.94
UBA3-210ENST00000485424 IGHV3-53P01767 116 aa9.16□□□□□ -0.94
UBA3-210ENST00000485424 ZNF138P52744 262 aa9.16□□□□□ -0.94
UBA3-210ENST00000485424 TAS2R45P59539 299 aa9.16□□□□□ -0.94
UBA3-210ENST00000485424 SLAQ13239 276 aa9.16□□□□□ -0.94
UBA3-210ENST00000485424 SCGB1C1Q8TD33 95 aa9.16□□□□□ -0.94
UBA3-210ENST00000485424 FAM19A4Q96LR4 140 aa9.16□□□□□ -0.94
UBA3-210ENST00000485424 C18orf15Q96N68 181 aa9.16□□□□□ -0.94
UBA3-210ENST00000485424 VGLL1Q99990 258 aa9.16□□□□□ -0.94
UBA3-210ENST00000485424 MRPL16Q9NX20 251 aaKnown RBP9.16□□□□□ -0.94
UBA3-210ENST00000485424 INMT-MINDY4F8WBC2 141 aa9.15□□□□□ -0.94
UBA3-210ENST00000485424 SIVA1O15304 175 aa9.15□□□□□ -0.94
UBA3-210ENST00000485424 UPK1BO75841 260 aa9.15□□□□□ -0.94
UBA3-210ENST00000485424 IFNA5P01569 189 aa9.15□□□□□ -0.94
UBA3-210ENST00000485424 BTF3P20290 206 aaKnown RBP9.15□□□□□ -0.94
UBA3-210ENST00000485424 RANP62826 216 aaKnown RBP9.15□□□□□ -0.94
UBA3-210ENST00000485424 UBE2L3P68036 154 aaKnown RBP9.15□□□□□ -0.94
UBA3-210ENST00000485424 KHDC3LQ587J8 217 aa9.15□□□□□ -0.94
UBA3-210ENST00000485424 FFAR4Q5NUL3 377 aa9.15□□□□□ -0.94
UBA3-210ENST00000485424 ST6GAL2Q96JF0 529 aa9.15□□□□□ -0.94
UBA3-210ENST00000485424 FAM167A-AS1Q96KT0 104 aa9.15□□□□□ -0.94
UBA3-210ENST00000485424 ATP5SQ99766 215 aa9.15□□□□□ -0.94
UBA3-210ENST00000485424 KRTAP1-5Q9BYS1 174 aa9.15□□□□□ -0.94
UBA3-210ENST00000485424 PRO0255Q9UI72 69 aa9.15□□□□□ -0.94
UBA3-210ENST00000485424 TP53TG3Q9ULZ0 132 aa9.15□□□□□ -0.94
UBA3-210ENST00000485424 TRGV4A0A0C4DH28 118 aa9.14□□□□□ -0.95
UBA3-210ENST00000485424 EREGO14944 169 aa9.14□□□□□ -0.95
UBA3-210ENST00000485424 SSNA1O43805 119 aa9.14□□□□□ -0.95
UBA3-210ENST00000485424 FAM74A1Q5RGS3 127 aa9.14□□□□□ -0.95
UBA3-210ENST00000485424 MUC21Q5SSG8 566 aa9.14□□□□□ -0.95
UBA3-210ENST00000485424 Q8N1X5 172 aa9.14□□□□□ -0.95
UBA3-210ENST00000485424 LYPD1Q8N2G4 141 aa9.14□□□□□ -0.95
UBA3-210ENST00000485424 ZFAND2AQ8N6M9 145 aa9.14□□□□□ -0.95
UBA3-210ENST00000485424 Q8TAT8 98 aa9.14□□□□□ -0.95
UBA3-210ENST00000485424 PCNPQ8WW12 178 aaKnown RBP9.14□□□□□ -0.95
UBA3-210ENST00000485424 FXYD5Q96DB9 178 aa9.14□□□□□ -0.95
UBA3-210ENST00000485424 PHYHIPLQ96FC7 376 aa9.14□□□□□ -0.95
UBA3-210ENST00000485424 VSIG2Q96IQ7 327 aa9.14□□□□□ -0.95
UBA3-210ENST00000485424 TRBV7-9A0A0J9YWB2 115 aa9.13□□□□□ -0.95
UBA3-210ENST00000485424 RBAKDNA6NC62 111 aa9.13□□□□□ -0.95
UBA3-210ENST00000485424 DEFA1P59665 94 aa9.13□□□□□ -0.95
UBA3-210ENST00000485424 DEFA3P59666 94 aa9.13□□□□□ -0.95
UBA3-210ENST00000485424 PRR9Q5T870 116 aa9.13□□□□□ -0.95
UBA3-210ENST00000485424 FAM159AQ6UWV7 190 aa9.13□□□□□ -0.95
UBA3-210ENST00000485424 CMTM2Q8TAZ6 248 aa9.13□□□□□ -0.95
UBA3-210ENST00000485424 PPP1R1CQ8WVI7 109 aa9.13□□□□□ -0.95
UBA3-210ENST00000485424 RPH3ALQ9UNE2 315 aa9.13□□□□□ -0.95
UBA3-210ENST00000485424 HHLA3Q9XRX5 114 aa9.13□□□□□ -0.95
UBA3-210ENST00000485424 DMBT1Q9UGM3 2413 aaPredicted RBP9.13□□□□□ -0.95
UBA3-210ENST00000485424 TRGV11A0A075B6L2 103 aa9.12□□□□□ -0.95
UBA3-210ENST00000485424 A0A1W2PPV4 95 aa9.12□□□□□ -0.95
UBA3-210ENST00000485424 MRPL23Q16540 153 aaKnown RBP9.12□□□□□ -0.95
UBA3-210ENST00000485424 HYLS1Q96M11 299 aa9.12□□□□□ -0.95
UBA3-210ENST00000485424 C8orf49Q96NF6 230 aa9.12□□□□□ -0.95
UBA3-210ENST00000485424 SMIM3Q9BZL3 60 aa9.12□□□□□ -0.95
UBA3-210ENST00000485424 NAGKQ9UJ70 344 aa9.12□□□□□ -0.95
UBA3-210ENST00000485424 HSPB11Q9Y547 144 aa9.12□□□□□ -0.95
UBA3-210ENST00000485424 TRAV9-2A0A087WT02 112 aa9.11□□□□□ -0.95
UBA3-210ENST00000485424 H0YIZ8 118 aa9.11□□□□□ -0.95
UBA3-210ENST00000485424 NXPH4O95158 308 aa9.11□□□□□ -0.95
UBA3-210ENST00000485424 CRYBA4P53673 196 aa9.11□□□□□ -0.95
UBA3-210ENST00000485424 LINC00315P59091 139 aa9.11□□□□□ -0.95
UBA3-210ENST00000485424 KRTAP10-2P60368 255 aa9.11□□□□□ -0.95
UBA3-210ENST00000485424 ZNF266Q14584 549 aa9.11□□□□□ -0.95
UBA3-210ENST00000485424 ACOT6Q3I5F7 207 aaPredicted RBP9.11□□□□□ -0.95
UBA3-210ENST00000485424 SCRT2Q9NQ03 307 aa9.11□□□□□ -0.95
UBA3-210ENST00000485424 PTTG2Q9NZH5 202 aa9.11□□□□□ -0.95
UBA3-210ENST00000485424 LENEPQ9Y5L5 61 aa9.11□□□□□ -0.95
UBA3-210ENST00000485424 DIRC3C9JPN6 131 aa9.1□□□□□ -0.95
UBA3-210ENST00000485424 MPC2O95563 127 aa9.1□□□□□ -0.95
UBA3-210ENST00000485424 RPL12P30050 165 aaKnown RBP9.1□□□□□ -0.95
UBA3-210ENST00000485424 SRIP30626 198 aa9.1□□□□□ -0.95
UBA3-210ENST00000485424 ERVFC1-1P60608 527 aa9.1□□□□□ -0.95
UBA3-210ENST00000485424 TMEM183BQ1AE95 376 aa9.1□□□□□ -0.95
UBA3-210ENST00000485424 Q6ZQT7 251 aa9.1□□□□□ -0.95
UBA3-210ENST00000485424 NEGR1Q7Z3B1 354 aa9.1□□□□□ -0.95
UBA3-210ENST00000485424 TMEM183AQ8IXX5 376 aa9.1□□□□□ -0.95
UBA3-210ENST00000485424 SPXQ9BT56 116 aa9.1□□□□□ -0.95
UBA3-210ENST00000485424 PGPA6NDG6 321 aa9.09□□□□□ -0.95
UBA3-210ENST00000485424 H2BFSP57053 126 aa9.09□□□□□ -0.95
UBA3-210ENST00000485424 NFE4Q86UQ8 179 aa9.09□□□□□ -0.95
UBA3-210ENST00000485424 OTORQ9NRC9 128 aa9.09□□□□□ -0.95
UBA3-210ENST00000485424 LY96Q9Y6Y9 160 aa9.09□□□□□ -0.95
UBA3-210ENST00000485424 ORM1P02763 201 aa9.08□□□□□ -0.96
UBA3-210ENST00000485424 SFTA3P0C7M3 94 aa9.08□□□□□ -0.96
UBA3-210ENST00000485424 FHL2Q14192 279 aa9.08□□□□□ -0.96
UBA3-210ENST00000485424 Q6AWC8 147 aa9.08□□□□□ -0.96
UBA3-210ENST00000485424 LYPD5Q6UWN5 251 aa9.08□□□□□ -0.96
UBA3-210ENST00000485424 PQLC2Q6ZP29 291 aa9.08□□□□□ -0.96
UBA3-210ENST00000485424 TXNDC17Q9BRA2 123 aa9.08□□□□□ -0.96
UBA3-210ENST00000485424 MARVELD1Q9BSK0 173 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms