RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 KLF12Q9Y4X4 402 aa8.62□□□□□ -1.03
MSH5-216ENST00000484309 IGHV1OR15-1A0A075B7D0 117 aa8.61□□□□□ -1.03
MSH5-216ENST00000484309 TRGV1A0A0A0MS02 117 aa8.61□□□□□ -1.03
MSH5-216ENST00000484309 TRAV8-1A0A0A6YYK1 113 aa8.61□□□□□ -1.03
MSH5-216ENST00000484309 BORCS7-ASMTA0A0B4J1R7 106 aa8.61□□□□□ -1.03
MSH5-216ENST00000484309 A0A0J9YY99 117 aa8.61□□□□□ -1.03
MSH5-216ENST00000484309 HOXA5P20719 270 aa8.61□□□□□ -1.03
MSH5-216ENST00000484309 GCHFRP30047 84 aa8.61□□□□□ -1.03
MSH5-216ENST00000484309 FAM74A1Q5RGS3 127 aa8.61□□□□□ -1.03
MSH5-216ENST00000484309 IQCF2Q8IXL9 164 aa8.61□□□□□ -1.03
MSH5-216ENST00000484309 C15orf53Q8NAA6 179 aa8.61□□□□□ -1.03
MSH5-216ENST00000484309 ZNF680Q8NEM1 530 aa8.61□□□□□ -1.03
MSH5-216ENST00000484309 SGK494Q96LW2 274 aa8.61□□□□□ -1.03
MSH5-216ENST00000484309 NMBP08949 121 aa8.6□□□□□ -1.03
MSH5-216ENST00000484309 SERF2P84101 59 aa8.6□□□□□ -1.03
MSH5-216ENST00000484309 ANXA2RQ3ZCQ2 193 aa8.6□□□□□ -1.03
MSH5-216ENST00000484309 ARPC5LQ9BPX5 153 aa8.6□□□□□ -1.03
MSH5-216ENST00000484309 LINC00467Q9BRT7 94 aa8.6□□□□□ -1.03
MSH5-216ENST00000484309 ACTR3CQ9C0K3 210 aaPredicted RBP8.6□□□□□ -1.03
MSH5-216ENST00000484309 MRPL16Q9NX20 251 aaKnown RBP8.6□□□□□ -1.03
MSH5-216ENST00000484309 TRAV26-1A0A087WT03 109 aa8.59□□□□□ -1.03
MSH5-216ENST00000484309 F6UZH7 168 aa8.59□□□□□ -1.03
MSH5-216ENST00000484309 MBP02144 154 aa8.59□□□□□ -1.03
MSH5-216ENST00000484309 TCL1AP56279 114 aa8.59□□□□□ -1.03
MSH5-216ENST00000484309 DAZ2Q13117 558 aaKnown RBP8.59□□□□□ -1.03
MSH5-216ENST00000484309 GNPNAT1Q96EK6 184 aaPredicted RBP8.59□□□□□ -1.03
MSH5-216ENST00000484309 ATG101Q9BSB4 218 aa8.59□□□□□ -1.03
MSH5-216ENST00000484309 NAGKQ9UJ70 344 aa8.59□□□□□ -1.03
MSH5-216ENST00000484309 TRGV2A0A075B6R0 118 aa8.58□□□□□ -1.04
MSH5-216ENST00000484309 TRBV7-9A0A0J9YWB2 115 aa8.58□□□□□ -1.04
MSH5-216ENST00000484309 CXorf1O96002 111 aa8.58□□□□□ -1.04
MSH5-216ENST00000484309 IGHV3-53P01767 116 aa8.58□□□□□ -1.04
MSH5-216ENST00000484309 ZNF726P1Q15940 193 aa8.58□□□□□ -1.04
MSH5-216ENST00000484309 TMEM183BQ1AE95 376 aa8.58□□□□□ -1.04
MSH5-216ENST00000484309 RNF212Q495C1 297 aa8.58□□□□□ -1.04
MSH5-216ENST00000484309 TMEM183AQ8IXX5 376 aa8.58□□□□□ -1.04
MSH5-216ENST00000484309 TVP23CQ96ET8 276 aa8.58□□□□□ -1.04
MSH5-216ENST00000484309 ST6GAL2Q96JF0 529 aa8.58□□□□□ -1.04
MSH5-216ENST00000484309 GGTLC3B5MD39 225 aa8.57□□□□□ -1.04
MSH5-216ENST00000484309 SPINK4O60575 86 aa8.57□□□□□ -1.04
MSH5-216ENST00000484309 FGF8P55075 233 aaPredicted RBP8.57□□□□□ -1.04
MSH5-216ENST00000484309 ZNF415Q09FC8 603 aa8.57□□□□□ -1.04
MSH5-216ENST00000484309 IBA57Q5T440 356 aaKnown RBP8.57□□□□□ -1.04
MSH5-216ENST00000484309 Q6AWC8 147 aa8.57□□□□□ -1.04
MSH5-216ENST00000484309 TMED6Q8WW62 240 aa8.57□□□□□ -1.04
MSH5-216ENST00000484309 TREM1Q9NP99 234 aa8.57□□□□□ -1.04
MSH5-216ENST00000484309 CYTL1Q9NRR1 136 aa8.57□□□□□ -1.04
MSH5-216ENST00000484309 MDFICQ9P1T7 246 aa8.57□□□□□ -1.04
MSH5-216ENST00000484309 LENEPQ9Y5L5 61 aa8.57□□□□□ -1.04
MSH5-216ENST00000484309 CTXND1A0A1B0GTU2 59 aa8.56□□□□□ -1.04
MSH5-216ENST00000484309 TCRAP04437 139 aa8.56□□□□□ -1.04
MSH5-216ENST00000484309 UBE2G2P60604 165 aa8.56□□□□□ -1.04
MSH5-216ENST00000484309 SUMO1P63165 101 aaKnown RBP8.56□□□□□ -1.04
MSH5-216ENST00000484309 AKR1C8PQ5T2L2 129 aa8.56□□□□□ -1.04
MSH5-216ENST00000484309 FAM159AQ6UWV7 190 aa8.56□□□□□ -1.04
MSH5-216ENST00000484309 C5orf17Q8NAS9 161 aa8.56□□□□□ -1.04
MSH5-216ENST00000484309 SUN5Q8TC36 379 aa8.56□□□□□ -1.04
MSH5-216ENST00000484309 C8orf49Q96NF6 230 aa8.56□□□□□ -1.04
MSH5-216ENST00000484309 TMEM167BQ9NRX6 74 aa8.56□□□□□ -1.04
MSH5-216ENST00000484309 DNAH2Q9P225 4427 aa8.55□□□□□ -1.04
MSH5-216ENST00000484309 DNAH17Q9UFH2 4485 aa8.55□□□□□ -1.04
MSH5-216ENST00000484309 TAAR5O14804 337 aa8.55□□□□□ -1.04
MSH5-216ENST00000484309 OR11H4Q8NGC9 324 aa8.55□□□□□ -1.04
MSH5-216ENST00000484309 LINC00588Q9Y4M8 146 aa8.55□□□□□ -1.04
MSH5-216ENST00000484309 TRGV11A0A075B6L2 103 aa8.54□□□□□ -1.04
MSH5-216ENST00000484309 RTL8CO15255 209 aa8.54□□□□□ -1.04
MSH5-216ENST00000484309 GNRH2O43555 120 aa8.54□□□□□ -1.04
MSH5-216ENST00000484309 CCL18P55774 89 aa8.54□□□□□ -1.04
MSH5-216ENST00000484309 LGALS9BQ3B8N2 356 aa8.54□□□□□ -1.04
MSH5-216ENST00000484309 Q6ZR54 194 aa8.54□□□□□ -1.04
MSH5-216ENST00000484309 PRNTQ86SH4 94 aa8.54□□□□□ -1.04
MSH5-216ENST00000484309 ARL6IP6Q8N6S5 226 aa8.54□□□□□ -1.04
MSH5-216ENST00000484309 VSIG2Q96IQ7 327 aa8.54□□□□□ -1.04
MSH5-216ENST00000484309 NDFIP1Q9BT67 221 aa8.54□□□□□ -1.04
MSH5-216ENST00000484309 EPDR1Q9UM22 224 aa8.54□□□□□ -1.04
MSH5-216ENST00000484309 PSG8Q9UQ74 426 aa8.54□□□□□ -1.04
MSH5-216ENST00000484309 HECTD4Q9Y4D8 3996 aa8.53□□□□□ -1.04
MSH5-216ENST00000484309 TRAV34A0A0B4J273 112 aa8.53□□□□□ -1.04
MSH5-216ENST00000484309 TRAV21A0A0B4J279 112 aa8.53□□□□□ -1.04
MSH5-216ENST00000484309 MAP1LC3B2A6NCE7 125 aa8.53□□□□□ -1.04
MSH5-216ENST00000484309 K7EQM0 130 aa8.53□□□□□ -1.04
MSH5-216ENST00000484309 IGLV2-11P01706 119 aa8.53□□□□□ -1.04
MSH5-216ENST00000484309 TYMSP04818 313 aa8.53□□□□□ -1.04
MSH5-216ENST00000484309 SFTA3P0C7M3 94 aa8.53□□□□□ -1.04
MSH5-216ENST00000484309 ZNF80P51504 273 aaPredicted RBP8.53□□□□□ -1.04
MSH5-216ENST00000484309 FLI1Q01543 452 aaPredicted RBP8.53□□□□□ -1.04
MSH5-216ENST00000484309 KCNRGQ8N5I3 272 aa8.53□□□□□ -1.04
MSH5-216ENST00000484309 CYB561D1Q8N8Q1 229 aa8.53□□□□□ -1.04
MSH5-216ENST00000484309 ZNRF2Q8NHG8 242 aa8.53□□□□□ -1.04
MSH5-216ENST00000484309 C18orf15Q96N68 181 aa8.53□□□□□ -1.04
MSH5-216ENST00000484309 MAP1LC3BQ9GZQ8 125 aa8.53□□□□□ -1.04
MSH5-216ENST00000484309 SERTM2A0A1B0GWG4 89 aa8.52□□□□□ -1.05
MSH5-216ENST00000484309 A0A1W2PRE2 83 aa8.52□□□□□ -1.05
MSH5-216ENST00000484309 GCGP01275 180 aa8.52□□□□□ -1.05
MSH5-216ENST00000484309 IFNA7P01567 189 aa8.52□□□□□ -1.05
MSH5-216ENST00000484309 FHITP49789 147 aa8.52□□□□□ -1.05
MSH5-216ENST00000484309 ZNF345Q14585 488 aa8.52□□□□□ -1.05
MSH5-216ENST00000484309 TMEM75Q8N9X5 138 aa8.52□□□□□ -1.05
MSH5-216ENST00000484309 LINC00479Q96M42 142 aa8.52□□□□□ -1.05
MSH5-216ENST00000484309 ZNF471Q9BX82 626 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms