RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 IGHV3-74A0A0B4J1X5 117 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 SMIM27A0A1W2PRY6 76 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 XKRY2A2RUG3 117 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 IZUMO1RA6ND01 250 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 C5orf52A6NGY3 159 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 K7EIL1 84 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 K7EMT4 169 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 UBE2CO00762 179 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 CHEK1O14757 476 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 CDX1P47902 265 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-216ENST00000484087 FABP9Q0Z7S8 132 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 ACTL10Q5JWF8 245 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 LCN12Q6JVE5 192 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 RASL11AQ6T310 242 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 GPHB5Q86YW7 130 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 Q8N1Y9 231 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 TSKUQ8WUA8 353 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 C16orf92Q96LL3 132 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 PRR25Q96S07 402 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 ZMAT4Q9H898 229 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 DAZ1Q9NQZ3 744 aaKnown RBP5.25□□□□□ -1.57
BRCA1-216ENST00000484087 SMAD5-AS1Q9Y6J3 95 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 IGHV7-4-1A0A0J9YVY3 117 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 RBAKDNA6NC62 111 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 FAM231BA6NCW3 169 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 HIST1H2BKO60814 126 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 IGLV2-11P01706 119 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 APOHP02749 345 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-216ENST00000484087 HIST1H2BJP06899 126 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 LGALS1P09382 135 aaKnown RBP5.24□□□□□ -1.57
BRCA1-216ENST00000484087 EDN2P20800 178 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 HIST1H2BOP23527 126 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 S100A2P29034 98 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 HIST1H2BBP33778 126 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 TCL1AP56279 114 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 HIST1H2BDP58876 126 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 RAB4BP61018 213 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 HIST1H2BCP62807 126 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 FHL3Q13643 280 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 HIST2H2BEQ16778 126 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-216ENST00000484087 UNQ9165/PRO28630Q6UXU0 137 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 ATP5L2Q7Z4Y8 100 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 OR1N2Q8NGR9 330 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 GLMPQ8WWB7 406 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 DLX4Q92988 240 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-216ENST00000484087 HIST1H2BHQ93079 126 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 BORCS7Q96B45 105 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 UBE2E2Q96LR5 201 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 HIST1H2BNQ99877 126 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 HIST1H2BMQ99879 126 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 GNB1LQ9BYB4 327 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 GFRA4Q9GZZ7 299 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 X6R8D5 127 aa5.24□□□□□ -1.57
BRCA1-216ENST00000484087 IGKV2-40A0A087WW87 121 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-216ENST00000484087 C19orf71A6NCJ1 209 aa5.23□□□□□ -1.57
BRCA1-216ENST00000484087 SNURFLB1AK76 121 aa5.23□□□□□ -1.57
BRCA1-216ENST00000484087 IGKV2D-40P01614 121 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-216ENST00000484087 HLA-DQA1P01909 254 aa5.23□□□□□ -1.57
BRCA1-216ENST00000484087 S100A8P05109 93 aa5.23□□□□□ -1.57
BRCA1-216ENST00000484087 SMUG1Q53HV7 270 aa5.23□□□□□ -1.57
BRCA1-216ENST00000484087 TMEM78Q5T7P6 136 aa5.23□□□□□ -1.57
BRCA1-216ENST00000484087 Q6AWC8 147 aa5.23□□□□□ -1.57
BRCA1-216ENST00000484087 OR2D3Q8NGH3 330 aa5.23□□□□□ -1.57
BRCA1-216ENST00000484087 NEU1Q99519 415 aa5.23□□□□□ -1.57
BRCA1-216ENST00000484087 RHPN1-AS1Q9BWJ2 59 aa5.23□□□□□ -1.57
BRCA1-216ENST00000484087 SMPXQ9UHP9 88 aa5.23□□□□□ -1.57
BRCA1-216ENST00000484087 HIGD1CA8MV81 97 aa5.22□□□□□ -1.57
BRCA1-216ENST00000484087 NPIPB6E9PJ23 425 aa5.22□□□□□ -1.57
BRCA1-216ENST00000484087 OVOL1O14753 267 aa5.22□□□□□ -1.57
BRCA1-216ENST00000484087 SPINK4O60575 86 aa5.22□□□□□ -1.57
BRCA1-216ENST00000484087 CA1P00915 261 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-216ENST00000484087 HOXA5P20719 270 aa5.22□□□□□ -1.57
BRCA1-216ENST00000484087 CBLN1P23435 193 aa5.22□□□□□ -1.57
BRCA1-216ENST00000484087 ID1P41134 155 aa5.22□□□□□ -1.57
BRCA1-216ENST00000484087 RPS20P60866 119 aaKnown RBP5.22□□□□□ -1.57
BRCA1-216ENST00000484087 FAM162BQ5T6X4 162 aa5.22□□□□□ -1.57
BRCA1-216ENST00000484087 MRPL54Q6P161 138 aaKnown RBP5.22□□□□□ -1.57
BRCA1-216ENST00000484087 RBPMS2Q6ZRY4 209 aaKnown RBP5.22□□□□□ -1.57
BRCA1-216ENST00000484087 ZNF738Q8NE65 137 aa5.22□□□□□ -1.57
BRCA1-216ENST00000484087 NUP35Q8NFH5 326 aa5.22□□□□□ -1.57
BRCA1-216ENST00000484087 DPF1Q92782 380 aa5.22□□□□□ -1.57
BRCA1-216ENST00000484087 ZC2HC1AQ96GY0 325 aa5.22□□□□□ -1.57
BRCA1-216ENST00000484087 NRN1Q9NPD7 142 aa5.22□□□□□ -1.57
BRCA1-216ENST00000484087 TMEM189A5PLL7 270 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 ZNF705FA8MVS1 300 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-216ENST00000484087 LINC01619G3V211 115 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 LGALS9O00182 355 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 PHOX2AO14813 284 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 SAP30O75446 220 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 HLA-DMBP28068 263 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 ZNF138P52744 262 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 EGFEM1PQ0D2K5 195 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 DEFB121Q5J5C9 76 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 IGFL4Q6B9Z1 124 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 TCF24Q7RTU0 167 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 COX8CQ7Z4L0 72 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 RNF182Q8N6D2 247 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 OR10J6PQ8NGY7 276 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms