RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 RUSC1-AS1Q66K80 236 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 MRPL54Q6P161 138 aaKnown RBP5.93□□□□□ -1.46
SNX13-208ENST00000482558 Q6ZSV7 163 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 GOLT1AQ6ZVE7 132 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 MRPL52Q86TS9 123 aaKnown RBP5.93□□□□□ -1.46
SNX13-208ENST00000482558 DYNAPQ8N1N2 210 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 C10orf105Q8TEF2 133 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 SLC50A1Q9BRV3 221 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 NDFIP1Q9BT67 221 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 FAM103A1Q9BTL3 118 aaKnown RBP5.93□□□□□ -1.46
SNX13-208ENST00000482558 GNB4Q9HAV0 340 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 ZNF580Q9UK33 172 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 PSG8Q9UQ74 426 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 TSSC4Q9Y5U2 329 aaPredicted RBP5.93□□□□□ -1.46
SNX13-208ENST00000482558 PLXNB1O43157 2135 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 SPTBN4Q9H254 2564 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 A0A1B0GUS0 222 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 TSPAN13O95857 204 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 IGLV2-11P01706 119 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 GPX1P07203 203 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 SLC25A16P16260 332 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 CD24P25063 80 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 DDTP30046 118 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 SRIP30626 198 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 ID1P41134 155 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 RHOGP84095 191 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 NDPQ00604 133 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 ATP5G2Q06055 141 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 C15orf32Q32M92 178 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 LEMD1Q68G75 181 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 PRNTQ86SH4 94 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 TMEM256Q8N2U0 113 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 C5orf56Q8N8D9 126 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 MAPKAPK5-AS1Q8N8E1 139 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 GATD1Q8NB37 220 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 CHCHD1Q96BP2 118 aaKnown RBP5.92□□□□□ -1.46
SNX13-208ENST00000482558 USMG5Q96IX5 58 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 DCHS1Q96JQ0 3298 aa5.92□□□□□ -1.46
SNX13-208ENST00000482558 SPTBN1Q01082 2364 aaKnown RBP5.92□□□□□ -1.46
SNX13-208ENST00000482558 CHD8Q9HCK8 2581 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 A0A1B0GUT8 65 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 GRIFINA4D1Z8 144 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 OR2T8A6NH00 312 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 B4DSR2 109 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 C19orf84I3L1E1 186 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 J3QLI3 93 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 ZNF324O75467 553 aaPredicted RBP5.91□□□□□ -1.46
SNX13-208ENST00000482558 IGHG4P01861 327 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 OR5AL1P0C617 328 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 KLF17Q5JT82 389 aaPredicted RBP5.91□□□□□ -1.46
SNX13-208ENST00000482558 EXOC3-AS1Q8N2X6 119 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 OR2D3Q8NGH3 330 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 MRAPQ8TCY5 172 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 METTL26Q96S19 204 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 MSRB1Q9NZV6 116 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 V9GYY9 64 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 NBASA2RRP1 2371 aa5.91□□□□□ -1.46
SNX13-208ENST00000482558 KMT2BQ9UMN6 2715 aaPredicted RBP5.9□□□□□ -1.46
SNX13-208ENST00000482558 ATRXP46100 2492 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 PKD1L2Q7Z442 2459 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 COL6A6A6NMZ7 2263 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 ADGRG4Q8IZF6 3080 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 A0A087WZ39 114 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.9□□□□□ -1.46
SNX13-208ENST00000482558 TRAV41A0A0B4J266 112 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 A0A1W2PS18 150 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 C20orf202A1L168 122 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 ATP6V0E1O15342 81 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 SPINK4O60575 86 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 MSMBP08118 114 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 AMTP48728 403 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 PMCHL1Q16048 86 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 ECSCRQ19T08 205 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 SAMD13Q5VXD3 122 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 TEX43Q6ZNM6 134 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 BOD1L2Q8IYS8 172 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 C18orf32Q8TCD1 76 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 HSPB9Q9BQS6 159 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 TP53TG3Q9ULZ0 132 aa5.9□□□□□ -1.46
SNX13-208ENST00000482558 BAHCC1Q9P281 2608 aa5.9□□□□□ -1.47
SNX13-208ENST00000482558 A0A0G2JLM5 398 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 TMEM189A5PLL7 270 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 ZNF705FA8MVS1 300 aaPredicted RBP5.89□□□□□ -1.47
SNX13-208ENST00000482558 BUB3O43684 328 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 ZNF705DP0CH99 300 aaPredicted RBP5.89□□□□□ -1.47
SNX13-208ENST00000482558 ZNF705BP0CI00 300 aaPredicted RBP5.89□□□□□ -1.47
SNX13-208ENST00000482558 GPR183P32249 361 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 SLC35B1P78383 322 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 FAM120AOSQ5T036 256 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 ZNF493Q6ZR52 646 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 Q6ZVQ6 151 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 ZNF664Q8N3J9 261 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 GTSF1Q8WW33 167 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 ZC2HC1AQ96GY0 325 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 C20orf144Q9BQM9 153 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 LENEPQ9Y5L5 61 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 COX11Q9Y6N1 276 aa5.89□□□□□ -1.47
SNX13-208ENST00000482558 EPG5Q9HCE0 2579 aa5.88□□□□□ -1.47
SNX13-208ENST00000482558 LOC102724200A0A096LPH7 203 aaPredicted RBP5.88□□□□□ -1.47
SNX13-208ENST00000482558 IGHV4-61A0A0C4DH41 118 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms