RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 LINC01619G3V211 115 aa11.2□□□□□ -0.62
NPHP4-208ENST00000478423 DNAL4O96015 105 aa11.2□□□□□ -0.62
NPHP4-208ENST00000478423 IGHV4-38-2P0DP08 117 aa11.2□□□□□ -0.62
NPHP4-208ENST00000478423 CRIP3Q6Q6R5 217 aa11.2□□□□□ -0.62
NPHP4-208ENST00000478423 ZC2HC1AQ96GY0 325 aa11.2□□□□□ -0.62
NPHP4-208ENST00000478423 KNCNA6PVL3 124 aa11.2□□□□□ -0.62
NPHP4-208ENST00000478423 SPCS1Q9Y6A9 102 aa11.2□□□□□ -0.62
NPHP4-208ENST00000478423 K7EIM0 57 aa11.2□□□□□ -0.62
NPHP4-208ENST00000478423 HLA-DMBP28068 263 aa11.2□□□□□ -0.62
NPHP4-208ENST00000478423 BLCAPP62952 87 aa11.2□□□□□ -0.62
NPHP4-208ENST00000478423 ZC2HC1BQ5TFG8 222 aa11.2□□□□□ -0.62
NPHP4-208ENST00000478423 Q6ZPA2 131 aa11.2□□□□□ -0.62
NPHP4-208ENST00000478423 PTPRSQ13332 1948 aa11.19□□□□□ -0.62
NPHP4-208ENST00000478423 PRSS46E5RG02 174 aa11.19□□□□□ -0.62
NPHP4-208ENST00000478423 ELANEP08246 267 aa11.19□□□□□ -0.62
NPHP4-208ENST00000478423 SPOCK3Q9BQ16 436 aa11.19□□□□□ -0.62
NPHP4-208ENST00000478423 PROP1O75360 226 aa11.19□□□□□ -0.62
NPHP4-208ENST00000478423 ZNF664Q8N3J9 261 aa11.19□□□□□ -0.62
NPHP4-208ENST00000478423 DTX2Q86UW9 622 aa11.19□□□□□ -0.62
NPHP4-208ENST00000478423 ODF3L1Q8IXM7 274 aa11.19□□□□□ -0.62
NPHP4-208ENST00000478423 A0A087WX48 190 aa11.18□□□□□ -0.62
NPHP4-208ENST00000478423 ADARB2-AS1A8MUL3 147 aa11.18□□□□□ -0.62
NPHP4-208ENST00000478423 TMEM95Q3KNT9 176 aa11.18□□□□□ -0.62
NPHP4-208ENST00000478423 KLK9Q9UKQ9 250 aa11.18□□□□□ -0.62
NPHP4-208ENST00000478423 FN1P02751 2386 aaKnown RBP11.18□□□□□ -0.62
NPHP4-208ENST00000478423 ZFP36P26651 326 aaKnown RBP11.18□□□□□ -0.62
NPHP4-208ENST00000478423 MORN5Q5VZ52 161 aa11.18□□□□□ -0.62
NPHP4-208ENST00000478423 PRSS57Q6UWY2 283 aa11.18□□□□□ -0.62
NPHP4-208ENST00000478423 C10orf105Q8TEF2 133 aa11.18□□□□□ -0.62
NPHP4-208ENST00000478423 ORAOV1Q8WV07 137 aa11.18□□□□□ -0.62
NPHP4-208ENST00000478423 PRADC1Q9BSG0 188 aa11.18□□□□□ -0.62
NPHP4-208ENST00000478423 TRAV12-2A0A075B6T6 113 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 TRAV2A0A0B4J234 112 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 I3L2K1 104 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 VPREB3Q9UKI3 123 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 MRPS16Q9Y3D3 137 aaKnown RBP11.17□□□□□ -0.62
NPHP4-208ENST00000478423 IGHV7-4-1A0A0J9YVY3 117 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 E7EUB6 86 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 Q8N7P7 452 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 K7EN84 100 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 ANXA2RQ3ZCQ2 193 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 CFAP161Q6P656 301 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 DPH3Q96FX2 82 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 A0A1B0GWB2 263 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 SMIM27A0A1W2PRY6 76 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 DEFB130BP0DP73 79 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 DEFB130AP0DP74 79 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 PLNP26678 52 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 DAZAP2Q15038 168 aaPredicted RBP11.17□□□□□ -0.62
NPHP4-208ENST00000478423 PATE2Q6UY27 113 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 NPBQ8NG41 125 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 PHLDA1Q8WV24 401 aaPredicted RBP11.17□□□□□ -0.62
NPHP4-208ENST00000478423 C1orf159Q96HA4 380 aa11.17□□□□□ -0.62
NPHP4-208ENST00000478423 IGKV1OR2-108A0A075B7D4 117 aa11.16□□□□□ -0.62
NPHP4-208ENST00000478423 Q8N9W7 124 aa11.16□□□□□ -0.62
NPHP4-208ENST00000478423 ZNF462Q96JM2 2506 aa11.16□□□□□ -0.62
NPHP4-208ENST00000478423 IGLV11-55A0A075B6I3 123 aa11.16□□□□□ -0.62
NPHP4-208ENST00000478423 CDKN1BP46527 198 aa11.16□□□□□ -0.62
NPHP4-208ENST00000478423 OR9G4Q8NGQ1 327 aa11.16□□□□□ -0.62
NPHP4-208ENST00000478423 F6UB75 175 aa11.15□□□□□ -0.62
NPHP4-208ENST00000478423 MALP21145 153 aa11.15□□□□□ -0.62
NPHP4-208ENST00000478423 CGB3P0DN86 165 aa11.15□□□□□ -0.62
NPHP4-208ENST00000478423 CGB7P0DN87 165 aa11.15□□□□□ -0.62
NPHP4-208ENST00000478423 HSD52Q0P140 79 aa11.15□□□□□ -0.62
NPHP4-208ENST00000478423 DEFB113Q30KQ7 82 aa11.15□□□□□ -0.62
NPHP4-208ENST00000478423 AGPAT4-IT1Q9H0P7 198 aa11.15□□□□□ -0.62
NPHP4-208ENST00000478423 CTSGP08311 255 aa11.15□□□□□ -0.62
NPHP4-208ENST00000478423 MRPL51Q4U2R6 128 aaKnown RBP11.15□□□□□ -0.62
NPHP4-208ENST00000478423 KMT2EQ8IZD2 1858 aa11.15□□□□□ -0.63
NPHP4-208ENST00000478423 IGHV1OR15-1A0A075B7D0 117 aa11.15□□□□□ -0.63
NPHP4-208ENST00000478423 TRBV7-9A0A0J9YWB2 115 aa11.15□□□□□ -0.63
NPHP4-208ENST00000478423 TEX43Q6ZNM6 134 aa11.15□□□□□ -0.63
NPHP4-208ENST00000478423 DYNAPQ8N1N2 210 aa11.15□□□□□ -0.63
NPHP4-208ENST00000478423 KLF2Q9Y5W3 355 aaPredicted RBP11.15□□□□□ -0.63
NPHP4-208ENST00000478423 ARHGAP32A7KAX9 2087 aa11.14□□□□□ -0.63
NPHP4-208ENST00000478423 H3BUA1 57 aa11.14□□□□□ -0.63
NPHP4-208ENST00000478423 A0A087X0K7 114 aa11.14□□□□□ -0.63
NPHP4-208ENST00000478423 MPV17L2Q567V2 206 aa11.14□□□□□ -0.63
NPHP4-208ENST00000478423 C3orf56Q8N813 242 aa11.14□□□□□ -0.63
NPHP4-208ENST00000478423 UTF1Q5T230 341 aa11.14□□□□□ -0.63
NPHP4-208ENST00000478423 MRPL36Q9P0J6 103 aaKnown RBP11.14□□□□□ -0.63
NPHP4-208ENST00000478423 SEC11AP67812 179 aa11.13□□□□□ -0.63
NPHP4-208ENST00000478423 OR5A1Q8NGJ0 315 aa11.13□□□□□ -0.63
NPHP4-208ENST00000478423 LTAP01374 205 aa11.13□□□□□ -0.63
NPHP4-208ENST00000478423 IGLV2-23P01705 113 aa11.13□□□□□ -0.63
NPHP4-208ENST00000478423 BCL6BQ8N143 479 aaPredicted RBP11.13□□□□□ -0.63
NPHP4-208ENST00000478423 STPG4Q8N801 248 aa11.13□□□□□ -0.63
NPHP4-208ENST00000478423 MTORP42345 2549 aa11.13□□□□□ -0.63
NPHP4-208ENST00000478423 GP9P14770 177 aa11.12□□□□□ -0.63
NPHP4-208ENST00000478423 C2orf66Q6UXQ4 117 aa11.12□□□□□ -0.63
NPHP4-208ENST00000478423 NAA38Q9BRA0 125 aaKnown RBP11.12□□□□□ -0.63
NPHP4-208ENST00000478423 TEX22C9J3V5 150 aa11.12□□□□□ -0.63
NPHP4-208ENST00000478423 HOXD3P31249 432 aaPredicted RBP11.12□□□□□ -0.63
NPHP4-208ENST00000478423 DEFB136Q30KP8 78 aa11.12□□□□□ -0.63
NPHP4-208ENST00000478423 TRAV26-2A0A0B4J265 109 aa11.12□□□□□ -0.63
NPHP4-208ENST00000478423 BRWD1-AS2P59051 145 aa11.12□□□□□ -0.63
NPHP4-208ENST00000478423 TRAV13-1A0A0B4J241 112 aa11.11□□□□□ -0.63
NPHP4-208ENST00000478423 IGHV3-16A0A0C4DH30 117 aa11.11□□□□□ -0.63
NPHP4-208ENST00000478423 RHODO00212 210 aa11.11□□□□□ -0.63
NPHP4-208ENST00000478423 TRPT1Q86TN4 253 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms