RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 M0R2N4 97 aa15.18■□□□□ 0.02
COL9A3-211ENST00000477612 RGS13O14921 159 aa15.18■□□□□ 0.02
COL9A3-211ENST00000477612 SPINK4O60575 86 aa15.18■□□□□ 0.02
COL9A3-211ENST00000477612 NUDT3O95989 172 aa15.18■□□□□ 0.02
COL9A3-211ENST00000477612 MBP02144 154 aa15.18■□□□□ 0.02
COL9A3-211ENST00000477612 CDC34P49427 236 aaPredicted RBP15.18■□□□□ 0.02
COL9A3-211ENST00000477612 Q6AWC8 147 aa15.18■□□□□ 0.02
COL9A3-211ENST00000477612 INO80EQ8NBZ0 244 aaPredicted RBP15.18■□□□□ 0.02
COL9A3-211ENST00000477612 TNFSF18Q9UNG2 199 aa15.18■□□□□ 0.02
COL9A3-211ENST00000477612 OR5I1Q13606 314 aa15.17■□□□□ 0.02
COL9A3-211ENST00000477612 ATG101Q9BSB4 218 aa15.17■□□□□ 0.02
COL9A3-211ENST00000477612 TP53TG3Q9ULZ0 132 aa15.17■□□□□ 0.02
COL9A3-211ENST00000477612 KLF12Q9Y4X4 402 aa15.17■□□□□ 0.02
COL9A3-211ENST00000477612 IGLV2-18A0A075B6J9 118 aa15.16■□□□□ 0.02
COL9A3-211ENST00000477612 G3V3Q6 166 aa15.16■□□□□ 0.02
COL9A3-211ENST00000477612 RTL8CO15255 209 aa15.16■□□□□ 0.02
COL9A3-211ENST00000477612 HMGB3O15347 200 aaKnown RBP15.16■□□□□ 0.02
COL9A3-211ENST00000477612 ARL14EPLP0DKL9 152 aa15.16■□□□□ 0.02
COL9A3-211ENST00000477612 OR2T35Q8NGX2 323 aa15.16■□□□□ 0.02
COL9A3-211ENST00000477612 CMTM2Q8TAZ6 248 aa15.16■□□□□ 0.02
COL9A3-211ENST00000477612 RAB24Q969Q5 203 aa15.16■□□□□ 0.02
COL9A3-211ENST00000477612 HYLS1Q96M11 299 aa15.16■□□□□ 0.02
COL9A3-211ENST00000477612 TRAV26-1A0A087WT03 109 aa15.15■□□□□ 0.02
COL9A3-211ENST00000477612 CCL18P55774 89 aa15.15■□□□□ 0.02
COL9A3-211ENST00000477612 ZNRF2Q8NHG8 242 aa15.15■□□□□ 0.02
COL9A3-211ENST00000477612 GNPNAT1Q96EK6 184 aaPredicted RBP15.15■□□□□ 0.02
COL9A3-211ENST00000477612 ST6GAL2Q96JF0 529 aa15.15■□□□□ 0.02
COL9A3-211ENST00000477612 TMPRSS5Q9H3S3 457 aa15.15■□□□□ 0.02
COL9A3-211ENST00000477612 SH3BGRL3Q9H299 93 aa15.14■□□□□ 0.01
COL9A3-211ENST00000477612 LINC00588Q9Y4M8 146 aa15.14■□□□□ 0.01
COL9A3-211ENST00000477612 FXYD6-FXYD2A0A087WZ82 144 aa15.13■□□□□ 0.01
COL9A3-211ENST00000477612 TRGV1A0A0A0MS02 117 aa15.13■□□□□ 0.01
COL9A3-211ENST00000477612 RPL7L1Q6DKI1 246 aaKnown RBP15.13■□□□□ 0.01
COL9A3-211ENST00000477612 ARPC5LQ9BPX5 153 aa15.13■□□□□ 0.01
COL9A3-211ENST00000477612 TRGV2A0A075B6R0 118 aa15.12■□□□□ 0.01
COL9A3-211ENST00000477612 A0A1B0GVY2 172 aa15.12■□□□□ 0.01
COL9A3-211ENST00000477612 SERTM2A0A1B0GWG4 89 aa15.12■□□□□ 0.01
COL9A3-211ENST00000477612 GCHFRP30047 84 aa15.12■□□□□ 0.01
COL9A3-211ENST00000477612 TDRG1Q3Y452 100 aa15.12■□□□□ 0.01
COL9A3-211ENST00000477612 GOLT1AQ6ZVE7 132 aa15.12■□□□□ 0.01
COL9A3-211ENST00000477612 ACTR3CQ9C0K3 210 aaPredicted RBP15.12■□□□□ 0.01
COL9A3-211ENST00000477612 PKD1P98161 4303 aa15.12■□□□□ 0.01
COL9A3-211ENST00000477612 BORCS7-ASMTA0A0B4J1R7 106 aa15.11■□□□□ 0.01
COL9A3-211ENST00000477612 ZNF415Q09FC8 603 aa15.11■□□□□ 0.01
COL9A3-211ENST00000477612 TVP23CQ96ET8 276 aa15.11■□□□□ 0.01
COL9A3-211ENST00000477612 VSIG2Q96IQ7 327 aa15.11■□□□□ 0.01
COL9A3-211ENST00000477612 A0A0J9YY99 117 aa15.1■□□□□ 0.01
COL9A3-211ENST00000477612 CXorf1O96002 111 aa15.1■□□□□ 0.01
COL9A3-211ENST00000477612 C5orf17Q8NAS9 161 aa15.1■□□□□ 0.01
COL9A3-211ENST00000477612 TMEM167BQ9NRX6 74 aa15.1■□□□□ 0.01
COL9A3-211ENST00000477612 RPH3ALQ9UNE2 315 aa15.1■□□□□ 0.01
COL9A3-211ENST00000477612 TRAV8-1A0A0A6YYK1 113 aa15.09■□□□□ 0.01
COL9A3-211ENST00000477612 PRSS29PA6NIE9 313 aa15.09■□□□□ 0.01
COL9A3-211ENST00000477612 TAAR5O14804 337 aa15.09■□□□□ 0.01
COL9A3-211ENST00000477612 GNG5P63218 68 aa15.09■□□□□ 0.01
COL9A3-211ENST00000477612 MUC21Q5SSG8 566 aa15.09■□□□□ 0.01
COL9A3-211ENST00000477612 FAM159AQ6UWV7 190 aa15.09■□□□□ 0.01
COL9A3-211ENST00000477612 SSX7Q7RTT5 188 aa15.09■□□□□ 0.01
COL9A3-211ENST00000477612 MDFICQ9P1T7 246 aa15.09■□□□□ 0.01
COL9A3-211ENST00000477612 TCRAP04437 139 aa15.08■□□□□ 0
COL9A3-211ENST00000477612 SPXQ9BT56 116 aa15.08■□□□□ 0
COL9A3-211ENST00000477612 UPK3BQ9BT76 320 aa15.08■□□□□ 0
COL9A3-211ENST00000477612 TREM1Q9NP99 234 aa15.08■□□□□ 0
COL9A3-211ENST00000477612 MRPL16Q9NX20 251 aaKnown RBP15.08■□□□□ 0
COL9A3-211ENST00000477612 TRGV11A0A075B6L2 103 aa15.07■□□□□ 0
COL9A3-211ENST00000477612 TRAV21A0A0B4J279 112 aa15.07■□□□□ 0
COL9A3-211ENST00000477612 NBDYA0A0U1RRE5 68 aa15.07■□□□□ 0
COL9A3-211ENST00000477612 ZNF726P1Q15940 193 aa15.07■□□□□ 0
COL9A3-211ENST00000477612 ESRGQ1W209 222 aa15.07■□□□□ 0
COL9A3-211ENST00000477612 SOHLH1Q5JUK2 328 aa15.07■□□□□ 0
COL9A3-211ENST00000477612 RASL10AQ92737 203 aa15.07■□□□□ 0
COL9A3-211ENST00000477612 CYTL1Q9NRR1 136 aa15.07■□□□□ 0
COL9A3-211ENST00000477612 A0A096LPF7 62 aa15.06■□□□□ 0
COL9A3-211ENST00000477612 A0A1W2PRE2 83 aa15.06■□□□□ 0
COL9A3-211ENST00000477612 SUMO1P63165 101 aaKnown RBP15.06■□□□□ 0
COL9A3-211ENST00000477612 SLAQ13239 276 aa15.06■□□□□ 0
COL9A3-211ENST00000477612 TMEM183BQ1AE95 376 aa15.06■□□□□ 0
COL9A3-211ENST00000477612 C1orf134Q5TEV5 83 aa15.06■□□□□ 0
COL9A3-211ENST00000477612 TMEM183AQ8IXX5 376 aa15.06■□□□□ 0
COL9A3-211ENST00000477612 CTXND1A0A1B0GTU2 59 aa15.05■□□□□ -0
COL9A3-211ENST00000477612 GGTLC3B5MD39 225 aa15.05■□□□□ -0
COL9A3-211ENST00000477612 ARPC5O15511 151 aa15.05■□□□□ -0
COL9A3-211ENST00000477612 Q9H8V8 135 aa15.05■□□□□ -0
COL9A3-211ENST00000477612 PRO0255Q9UI72 69 aa15.05■□□□□ -0
COL9A3-211ENST00000477612 EPDR1Q9UM22 224 aa15.05■□□□□ -0
COL9A3-211ENST00000477612 PKHD1P08F94 4074 aa15.05■□□□□ -0
COL9A3-211ENST00000477612 K7EQM0 130 aa15.04■□□□□ -0
COL9A3-211ENST00000477612 IGLV2-11P01706 119 aa15.04■□□□□ -0
COL9A3-211ENST00000477612 FHL2Q14192 279 aa15.04■□□□□ -0
COL9A3-211ENST00000477612 IQCF2Q8IXL9 164 aa15.04■□□□□ -0
COL9A3-211ENST00000477612 DYNC1H1Q14204 4646 aaKnown RBP15.04■□□□□ -0
COL9A3-211ENST00000477612 FBLL1A6NHQ2 334 aaKnown RBP15.03■□□□□ -0
COL9A3-211ENST00000477612 F6UZH7 168 aa15.03■□□□□ -0
COL9A3-211ENST00000477612 GNRH2O43555 120 aa15.03■□□□□ -0
COL9A3-211ENST00000477612 KCNS1Q96KK3 526 aa15.03■□□□□ -0
COL9A3-211ENST00000477612 SGK494Q96LW2 274 aa15.03■□□□□ -0
COL9A3-211ENST00000477612 NDFIP1Q9BT67 221 aa15.03■□□□□ -0
COL9A3-211ENST00000477612 PSG8Q9UQ74 426 aa15.03■□□□□ -0
COL9A3-211ENST00000477612 MRPS16Q9Y3D3 137 aaKnown RBP15.03■□□□□ -0
COL9A3-211ENST00000477612 DNAH11Q96DT5 4516 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms