RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 WNK2Q9Y3S1 2297 aa10.15□□□□□ -0.79
CCNL1-216ENST00000475298 NCOR2Q9Y618 2525 aa10.14□□□□□ -0.79
CCNL1-216ENST00000475298 I3L2K1 104 aa10.14□□□□□ -0.79
CCNL1-216ENST00000475298 BRI3O95415 125 aa10.14□□□□□ -0.79
CCNL1-216ENST00000475298 CFAP126Q5VTH2 177 aa10.14□□□□□ -0.79
CCNL1-216ENST00000475298 Q6AWC8 147 aa10.14□□□□□ -0.79
CCNL1-216ENST00000475298 C8orf46Q8TAG6 207 aa10.14□□□□□ -0.79
CCNL1-216ENST00000475298 UFC1Q9Y3C8 167 aa10.14□□□□□ -0.79
CCNL1-216ENST00000475298 MSRB2Q9Y3D2 182 aa10.14□□□□□ -0.79
CCNL1-216ENST00000475298 A0A1B0GW15 77 aa10.14□□□□□ -0.79
CCNL1-216ENST00000475298 KLF17Q5JT82 389 aaPredicted RBP10.14□□□□□ -0.79
CCNL1-216ENST00000475298 AMN1Q8IY45 258 aa10.14□□□□□ -0.79
CCNL1-216ENST00000475298 MAPKAPK5-AS1Q8N8E1 139 aa10.14□□□□□ -0.79
CCNL1-216ENST00000475298 PRNTQ86SH4 94 aa10.13□□□□□ -0.79
CCNL1-216ENST00000475298 GTSCR1Q86UQ5 136 aa10.13□□□□□ -0.79
CCNL1-216ENST00000475298 LY6G5BQ8NDX9 201 aa10.13□□□□□ -0.79
CCNL1-216ENST00000475298 HIGD1AQ9Y241 93 aa10.13□□□□□ -0.79
CCNL1-216ENST00000475298 PRSS29PA6NIE9 313 aa10.12□□□□□ -0.79
CCNL1-216ENST00000475298 IGKV1-17P01599 117 aa10.12□□□□□ -0.79
CCNL1-216ENST00000475298 HOXB4P17483 251 aaPredicted RBP10.12□□□□□ -0.79
CCNL1-216ENST00000475298 FAM104BQ5XKR9 115 aa10.12□□□□□ -0.79
CCNL1-216ENST00000475298 EXOC3-AS1Q8N2X6 119 aa10.12□□□□□ -0.79
CCNL1-216ENST00000475298 TMEM213A2RRL7 107 aa10.12□□□□□ -0.79
CCNL1-216ENST00000475298 EVI2AP22794 236 aa10.12□□□□□ -0.79
CCNL1-216ENST00000475298 ORMDL3Q8N138 153 aa10.12□□□□□ -0.79
CCNL1-216ENST00000475298 CARD19Q96LW7 228 aa10.12□□□□□ -0.79
CCNL1-216ENST00000475298 ASCL2Q99929 193 aa10.12□□□□□ -0.79
CCNL1-216ENST00000475298 RASL11BQ9BPW5 248 aa10.12□□□□□ -0.79
CCNL1-216ENST00000475298 TPPP3Q9BW30 176 aa10.12□□□□□ -0.79
CCNL1-216ENST00000475298 SLC25A39Q9BZJ4 359 aaPredicted RBP10.12□□□□□ -0.79
CCNL1-216ENST00000475298 AKAP6Q13023 2319 aa10.12□□□□□ -0.79
CCNL1-216ENST00000475298 K7EIM0 57 aa10.11□□□□□ -0.79
CCNL1-216ENST00000475298 TAL2Q16559 108 aa10.11□□□□□ -0.79
CCNL1-216ENST00000475298 MRPL51Q4U2R6 128 aaKnown RBP10.11□□□□□ -0.79
CCNL1-216ENST00000475298 PSMG4Q5JS54 123 aa10.11□□□□□ -0.79
CCNL1-216ENST00000475298 MORN3Q6PF18 240 aaPredicted RBP10.11□□□□□ -0.79
CCNL1-216ENST00000475298 CFHR4Q92496 578 aa10.11□□□□□ -0.79
CCNL1-216ENST00000475298 RAB1BQ9H0U4 201 aa10.11□□□□□ -0.79
CCNL1-216ENST00000475298 DPM3Q9P2X0 92 aa10.11□□□□□ -0.79
CCNL1-216ENST00000475298 LINC01548A6NM66 108 aa10.11□□□□□ -0.79
CCNL1-216ENST00000475298 CRIP1P50238 77 aa10.11□□□□□ -0.79
CCNL1-216ENST00000475298 HES1Q14469 280 aa10.11□□□□□ -0.79
CCNL1-216ENST00000475298 C17orf77Q96MU5 243 aa10.11□□□□□ -0.79
CCNL1-216ENST00000475298 NBR2O15453 112 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 NPYP01303 97 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 IGKCP01834 107 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 HLA-DRB4P13762 266 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 RPL32P62910 135 aaKnown RBP10.1□□□□□ -0.79
CCNL1-216ENST00000475298 KLRB1Q12918 225 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 GOLT1AQ6ZVE7 132 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 HLA-DRB4X5D2U9 266 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 HIVEP3Q5T1R4 2406 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 SMKR1H3BMG3 65 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 ZC2HC1BQ5TFG8 222 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 C1orf122Q6ZSJ8 110 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 DYNAPQ8N1N2 210 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 PTH2Q96A98 100 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 TIMD4Q96H15 378 aa10.1□□□□□ -0.79
CCNL1-216ENST00000475298 TRBV7-3A0A075B6L6 115 aa10.09□□□□□ -0.79
CCNL1-216ENST00000475298 C11orf71Q6IPW1 123 aa10.09□□□□□ -0.79
CCNL1-216ENST00000475298 OR11H6Q8NGC7 330 aa10.09□□□□□ -0.79
CCNL1-216ENST00000475298 CACNA1AO00555 2505 aa10.09□□□□□ -0.79
CCNL1-216ENST00000475298 A0A1W2PPR1 153 aa10.09□□□□□ -0.79
CCNL1-216ENST00000475298 SMIM20Q8N5G0 67 aa10.09□□□□□ -0.79
CCNL1-216ENST00000475298 TMEM158Q8WZ71 300 aa10.09□□□□□ -0.79
CCNL1-216ENST00000475298 RNF5Q99942 180 aa10.09□□□□□ -0.79
CCNL1-216ENST00000475298 SRSF8Q9BRL6 282 aaKnown RBP10.09□□□□□ -0.79
CCNL1-216ENST00000475298 ITPR1Q14643 2758 aa10.09□□□□□ -0.79
CCNL1-216ENST00000475298 ZFAND6Q6FIF0 208 aa10.08□□□□□ -0.8
CCNL1-216ENST00000475298 LYZL1Q6UWQ5 148 aa10.08□□□□□ -0.8
CCNL1-216ENST00000475298 CITED1Q99966 193 aa10.08□□□□□ -0.8
CCNL1-216ENST00000475298 ZFHX3Q15911 3703 aa10.08□□□□□ -0.8
CCNL1-216ENST00000475298 TRBV6-1A0A0K0K1D8 114 aa10.08□□□□□ -0.8
CCNL1-216ENST00000475298 NDPQ00604 133 aa10.08□□□□□ -0.8
CCNL1-216ENST00000475298 OTORQ9NRC9 128 aa10.08□□□□□ -0.8
CCNL1-216ENST00000475298 CACNA1BQ00975 2339 aa10.07□□□□□ -0.8
CCNL1-216ENST00000475298 TMEM8BA6NDV4 472 aa10.07□□□□□ -0.8
CCNL1-216ENST00000475298 ODF3BA8MYP8 253 aa10.07□□□□□ -0.8
CCNL1-216ENST00000475298 IGHV3-23P01764 117 aa10.07□□□□□ -0.8
CCNL1-216ENST00000475298 IL4P05112 153 aa10.07□□□□□ -0.8
CCNL1-216ENST00000475298 HIST1H4GQ99525 98 aa10.07□□□□□ -0.8
CCNL1-216ENST00000475298 LINC01546A6NGU7 62 aa10.07□□□□□ -0.8
CCNL1-216ENST00000475298 NCBP2LA6PVI3 153 aaKnown RBP10.07□□□□□ -0.8
CCNL1-216ENST00000475298 NDUFA3O95167 84 aa10.07□□□□□ -0.8
CCNL1-216ENST00000475298 ZFP36P26651 326 aaKnown RBP10.07□□□□□ -0.8
CCNL1-216ENST00000475298 VMO1Q7Z5L0 202 aa10.07□□□□□ -0.8
CCNL1-216ENST00000475298 ZNF491Q8N8L2 437 aa10.07□□□□□ -0.8
CCNL1-216ENST00000475298 PPDPFLQ8WWR9 84 aa10.07□□□□□ -0.8
CCNL1-216ENST00000475298 DPM2O94777 84 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 PRSS1P07477 247 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 PRTN3P24158 256 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 ANXA2RQ3ZCQ2 193 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 TEX29Q8N6K0 151 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 NPBQ8NG41 125 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 DLX4Q92988 240 aaPredicted RBP10.06□□□□□ -0.8
CCNL1-216ENST00000475298 RNF125Q96EQ8 232 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 FOXC2Q99958 501 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 SHANK2-AS3Q9BTD1 123 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 TMEM14CQ9P0S9 112 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 TNFRSF18Q9Y5U5 241 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms