RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 HTN1P15515 57 aa10.92□□□□□ -0.66
SRRT-209ENST00000474896 ATP5G3P48201 142 aa10.92□□□□□ -0.66
SRRT-209ENST00000474896 FGF8P55075 233 aaPredicted RBP10.92□□□□□ -0.66
SRRT-209ENST00000474896 IQCF2Q8IXL9 164 aa10.92□□□□□ -0.66
SRRT-209ENST00000474896 ZNF738Q8NE65 137 aa10.92□□□□□ -0.66
SRRT-209ENST00000474896 MBD3L1Q8WWY6 194 aa10.92□□□□□ -0.66
SRRT-209ENST00000474896 SUN5Q8TC36 379 aa10.91□□□□□ -0.66
SRRT-209ENST00000474896 SFT2D1Q8WV19 159 aa10.91□□□□□ -0.66
SRRT-209ENST00000474896 TMEM167BQ9NRX6 74 aa10.91□□□□□ -0.66
SRRT-209ENST00000474896 PPP1R14DQ9NXH3 145 aa10.91□□□□□ -0.66
SRRT-209ENST00000474896 H2AFB1P0C5Y9 115 aa10.9□□□□□ -0.66
SRRT-209ENST00000474896 TAS2R60P59551 318 aa10.9□□□□□ -0.66
SRRT-209ENST00000474896 HIST1H1AQ02539 215 aaPredicted RBP10.9□□□□□ -0.66
SRRT-209ENST00000474896 PSG3Q16557 428 aa10.9□□□□□ -0.66
SRRT-209ENST00000474896 EXOC3-AS1Q8N2X6 119 aa10.9□□□□□ -0.66
SRRT-209ENST00000474896 TMPRSS5Q9H3S3 457 aa10.9□□□□□ -0.66
SRRT-209ENST00000474896 AAMDCQ9H7C9 122 aa10.9□□□□□ -0.66
SRRT-209ENST00000474896 PRB4P10163 310 aaPredicted RBP10.89□□□□□ -0.67
SRRT-209ENST00000474896 RANP62826 216 aaKnown RBP10.89□□□□□ -0.67
SRRT-209ENST00000474896 SPATA12Q7Z6I5 190 aa10.89□□□□□ -0.67
SRRT-209ENST00000474896 Q8N1X5 172 aa10.89□□□□□ -0.67
SRRT-209ENST00000474896 LYPD1Q8N2G4 141 aa10.89□□□□□ -0.67
SRRT-209ENST00000474896 TMEM256Q8N2U0 113 aa10.89□□□□□ -0.67
SRRT-209ENST00000474896 OR8A1Q8NGG7 326 aa10.89□□□□□ -0.67
SRRT-209ENST00000474896 Q9H3A6 140 aa10.89□□□□□ -0.67
SRRT-209ENST00000474896 Q9H8V8 135 aa10.89□□□□□ -0.67
SRRT-209ENST00000474896 TIMM8BQ9Y5J9 83 aaPredicted RBP10.89□□□□□ -0.67
SRRT-209ENST00000474896 A0A1B0GV50 99 aa10.88□□□□□ -0.67
SRRT-209ENST00000474896 M0R3E3 92 aa10.88□□□□□ -0.67
SRRT-209ENST00000474896 ICAM4Q14773 271 aa10.88□□□□□ -0.67
SRRT-209ENST00000474896 TEX261Q6UWH6 196 aa10.88□□□□□ -0.67
SRRT-209ENST00000474896 RPUSD4Q96CM3 377 aaKnown RBP10.88□□□□□ -0.67
SRRT-209ENST00000474896 MRPL53Q96EL3 112 aaKnown RBP10.88□□□□□ -0.67
SRRT-209ENST00000474896 C16orf74Q96GX8 76 aa10.88□□□□□ -0.67
SRRT-209ENST00000474896 NOP10Q9NPE3 64 aaKnown RBP10.88□□□□□ -0.67
SRRT-209ENST00000474896 PRELID1Q9Y255 219 aa10.88□□□□□ -0.67
SRRT-209ENST00000474896 LRP1BQ9NZR2 4599 aa10.87□□□□□ -0.67
SRRT-209ENST00000474896 OR5I1Q13606 314 aa10.87□□□□□ -0.67
SRRT-209ENST00000474896 SCRT2Q9NQ03 307 aa10.87□□□□□ -0.67
SRRT-209ENST00000474896 OTORQ9NRC9 128 aa10.87□□□□□ -0.67
SRRT-209ENST00000474896 TRAV1-1A0A0B4J248 108 aa10.86□□□□□ -0.67
SRRT-209ENST00000474896 PRAC2D3DTV9 90 aa10.86□□□□□ -0.67
SRRT-209ENST00000474896 TEX46H3BTG2 121 aa10.86□□□□□ -0.67
SRRT-209ENST00000474896 ZNF680Q8NEM1 530 aa10.86□□□□□ -0.67
SRRT-209ENST00000474896 A0A1W2PRE2 83 aa10.85□□□□□ -0.67
SRRT-209ENST00000474896 PGPA6NDG6 321 aa10.85□□□□□ -0.67
SRRT-209ENST00000474896 CDKN1BP46527 198 aa10.85□□□□□ -0.67
SRRT-209ENST00000474896 UBE2G2P60604 165 aa10.85□□□□□ -0.67
SRRT-209ENST00000474896 BLOC1S1P78537 153 aa10.85□□□□□ -0.67
SRRT-209ENST00000474896 ZNF493Q6ZR52 646 aa10.85□□□□□ -0.67
SRRT-209ENST00000474896 TRAV26-1A0A087WT03 109 aa10.84□□□□□ -0.67
SRRT-209ENST00000474896 A0A0J9YY99 117 aa10.84□□□□□ -0.67
SRRT-209ENST00000474896 FAM74A7A6NL05 159 aa10.84□□□□□ -0.67
SRRT-209ENST00000474896 GGTLC3B5MD39 225 aa10.84□□□□□ -0.67
SRRT-209ENST00000474896 IFNA7P01567 189 aa10.84□□□□□ -0.67
SRRT-209ENST00000474896 CCL20P78556 96 aa10.84□□□□□ -0.67
SRRT-209ENST00000474896 OR10J6PQ8NGY7 276 aa10.84□□□□□ -0.67
SRRT-209ENST00000474896 RNASE8Q8TDE3 154 aaKnown RBP10.84□□□□□ -0.67
SRRT-209ENST00000474896 RXFP4Q8TDU9 374 aa10.84□□□□□ -0.67
SRRT-209ENST00000474896 KRTAP1-5Q9BYS1 174 aa10.84□□□□□ -0.67
SRRT-209ENST00000474896 H7BYZ3 331 aa10.83□□□□□ -0.68
SRRT-209ENST00000474896 SLC25A5P05141 298 aaKnown RBP10.83□□□□□ -0.68
SRRT-209ENST00000474896 CSN1S1P47710 185 aa10.83□□□□□ -0.68
SRRT-209ENST00000474896 PPT1P50897 306 aa10.83□□□□□ -0.68
SRRT-209ENST00000474896 KRTAP10-2P60368 255 aa10.83□□□□□ -0.68
SRRT-209ENST00000474896 SUMO1P63165 101 aaKnown RBP10.83□□□□□ -0.68
SRRT-209ENST00000474896 KIR3DS1Q14943 382 aa10.83□□□□□ -0.68
SRRT-209ENST00000474896 ESRGQ1W209 222 aa10.83□□□□□ -0.68
SRRT-209ENST00000474896 CMTM2Q8TAZ6 248 aa10.83□□□□□ -0.68
SRRT-209ENST00000474896 TMEM263Q8WUH6 116 aaKnown RBP10.83□□□□□ -0.68
SRRT-209ENST00000474896 ARL2-SNX15V9GYD0 113 aa10.83□□□□□ -0.68
SRRT-209ENST00000474896 IGKV2-40A0A087WW87 121 aaPredicted RBP10.82□□□□□ -0.68
SRRT-209ENST00000474896 PAGE4O60829 102 aa10.82□□□□□ -0.68
SRRT-209ENST00000474896 IGKV2D-40P01614 121 aaPredicted RBP10.82□□□□□ -0.68
SRRT-209ENST00000474896 TTC32Q5I0X7 151 aa10.82□□□□□ -0.68
SRRT-209ENST00000474896 CCDC28AQ8IWP9 274 aa10.82□□□□□ -0.68
SRRT-209ENST00000474896 ARL6IP6Q8N6S5 226 aa10.82□□□□□ -0.68
SRRT-209ENST00000474896 C5orf17Q8NAS9 161 aa10.82□□□□□ -0.68
SRRT-209ENST00000474896 NKX6-2Q9C056 277 aaPredicted RBP10.82□□□□□ -0.68
SRRT-209ENST00000474896 GNG13Q9P2W3 67 aa10.82□□□□□ -0.68
SRRT-209ENST00000474896 RPH3ALQ9UNE2 315 aa10.82□□□□□ -0.68
SRRT-209ENST00000474896 GAGE12BA1L429 117 aa10.81□□□□□ -0.68
SRRT-209ENST00000474896 DIRC3C9JPN6 131 aa10.81□□□□□ -0.68
SRRT-209ENST00000474896 NPIPB6E9PJ23 425 aa10.81□□□□□ -0.68
SRRT-209ENST00000474896 GAGE7O76087 117 aa10.81□□□□□ -0.68
SRRT-209ENST00000474896 GAGE12FP0CL80 117 aa10.81□□□□□ -0.68
SRRT-209ENST00000474896 GAGE12GP0CL81 117 aa10.81□□□□□ -0.68
SRRT-209ENST00000474896 GAGE12IP0CL82 117 aa10.81□□□□□ -0.68
SRRT-209ENST00000474896 HOXA5P20719 270 aa10.81□□□□□ -0.68
SRRT-209ENST00000474896 GNG5P63218 68 aa10.81□□□□□ -0.68
SRRT-209ENST00000474896 CST9LP1Q5W188 147 aa10.81□□□□□ -0.68
SRRT-209ENST00000474896 LINC00612Q8N6U2 182 aa10.81□□□□□ -0.68
SRRT-209ENST00000474896 MANBALQ9NQG1 85 aa10.81□□□□□ -0.68
SRRT-209ENST00000474896 ERCC8Q13216 396 aa10.8□□□□□ -0.68
SRRT-209ENST00000474896 LYPD6BQ8NI32 183 aa10.8□□□□□ -0.68
SRRT-209ENST00000474896 PCNPQ8WW12 178 aaKnown RBP10.8□□□□□ -0.68
SRRT-209ENST00000474896 C20orf144Q9BQM9 153 aa10.8□□□□□ -0.68
SRRT-209ENST00000474896 UPK3BQ9BT76 320 aa10.8□□□□□ -0.68
SRRT-209ENST00000474896 EPDR1Q9UM22 224 aa10.8□□□□□ -0.68
SRRT-209ENST00000474896 A0A1W2PPQ1 181 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms