RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 CDKN1BP46527 198 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 SUMO1P63165 101 aaKnown RBP6.59□□□□□ -1.35
SMC4-213ENST00000472282 TMEM78Q5T7P6 136 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 C9orf47Q6ZRZ4 202 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 GOLT1AQ6ZVE7 132 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 Q8TAT8 98 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 IGF2BP2-AS1Q96M15 143 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 LINC00477Q96M19 166 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 ODF3Q96PU9 254 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 RARRES2Q99969 163 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 AGPAT4-IT1Q9H0P7 198 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 TRAV8-1A0A0A6YYK1 113 aa6.58□□□□□ -1.36
SMC4-213ENST00000472282 NUPR2A6NF83 97 aa6.58□□□□□ -1.36
SMC4-213ENST00000472282 FAM74A7A6NL05 159 aa6.58□□□□□ -1.36
SMC4-213ENST00000472282 ZNF705EA8MWA4 302 aaPredicted RBP6.58□□□□□ -1.36
SMC4-213ENST00000472282 RBMY1A1P0DJD3 496 aaKnown RBP6.58□□□□□ -1.36
SMC4-213ENST00000472282 RBMY1CP0DJD4 496 aa6.58□□□□□ -1.36
SMC4-213ENST00000472282 TSPOP30536 169 aa6.58□□□□□ -1.36
SMC4-213ENST00000472282 LEPP41159 167 aa6.58□□□□□ -1.36
SMC4-213ENST00000472282 NANOS2P60321 138 aaKnown RBP6.58□□□□□ -1.36
SMC4-213ENST00000472282 RBMY1FQ15415 496 aaKnown RBP6.58□□□□□ -1.36
SMC4-213ENST00000472282 ZNF705AQ6ZN79 300 aaPredicted RBP6.58□□□□□ -1.36
SMC4-213ENST00000472282 C1orf158Q8N1D5 194 aa6.58□□□□□ -1.36
SMC4-213ENST00000472282 ARL6IP6Q8N6S5 226 aa6.58□□□□□ -1.36
SMC4-213ENST00000472282 ZNF492Q9P255 531 aa6.58□□□□□ -1.36
SMC4-213ENST00000472282 GOLT1BQ9Y3E0 138 aa6.58□□□□□ -1.36
SMC4-213ENST00000472282 X6R8D5 127 aa6.58□□□□□ -1.36
SMC4-213ENST00000472282 PAGE4O60829 102 aa6.57□□□□□ -1.36
SMC4-213ENST00000472282 IFNA7P01567 189 aa6.57□□□□□ -1.36
SMC4-213ENST00000472282 HBE1P02100 147 aa6.57□□□□□ -1.36
SMC4-213ENST00000472282 TCRAP04437 139 aa6.57□□□□□ -1.36
SMC4-213ENST00000472282 ATP5G3P48201 142 aa6.57□□□□□ -1.36
SMC4-213ENST00000472282 ZNF138P52744 262 aa6.57□□□□□ -1.36
SMC4-213ENST00000472282 GFI1BQ5VTD9 330 aa6.57□□□□□ -1.36
SMC4-213ENST00000472282 CST9LP1Q5W188 147 aa6.57□□□□□ -1.36
SMC4-213ENST00000472282 Q8NAQ8 132 aa6.57□□□□□ -1.36
SMC4-213ENST00000472282 PHLDA1Q8WV24 401 aaPredicted RBP6.57□□□□□ -1.36
SMC4-213ENST00000472282 FAM19A4Q96LR4 140 aa6.57□□□□□ -1.36
SMC4-213ENST00000472282 SGK494Q96LW2 274 aa6.57□□□□□ -1.36
SMC4-213ENST00000472282 TMEM208Q9BTX3 173 aa6.57□□□□□ -1.36
SMC4-213ENST00000472282 ARL2-SNX15V9GYD0 113 aa6.57□□□□□ -1.36
SMC4-213ENST00000472282 TRAV1-1A0A0B4J248 108 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 IGHV4-28A0A0C4DH34 117 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 SERTM2A0A1B0GWG4 89 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 KLLNB2CW77 178 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 TEX46H3BTG2 121 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 K7EQM0 130 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 PEX7O00628 323 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 MIFP14174 115 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 CRISP2P16562 243 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 PPT1P50897 306 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 CCL20P78556 96 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 BTN1A1Q13410 526 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 PRR9Q5T870 116 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 ZFAND2AQ8N6M9 145 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 CYB561D1Q8N8Q1 229 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 ATG101Q9BSB4 218 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 NKX6-2Q9C056 277 aaPredicted RBP6.56□□□□□ -1.36
SMC4-213ENST00000472282 C11orf68Q9H3H3 251 aaKnown RBP6.56□□□□□ -1.36
SMC4-213ENST00000472282 GNG13Q9P2W3 67 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 EPDR1Q9UM22 224 aa6.56□□□□□ -1.36
SMC4-213ENST00000472282 TRAV12-3A0A0B4J271 114 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 TRBV7-9A0A0J9YWB2 115 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 C7orf71A4D174 169 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 GPX1P07203 203 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 BLOC1S1P78537 153 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 FLI1Q01543 452 aaPredicted RBP6.55□□□□□ -1.36
SMC4-213ENST00000472282 CCDC28AQ8IWP9 274 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 TMEM256Q8N2U0 113 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 TMEM75Q8N9X5 138 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 C11orf45Q8TAV5 145 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 C8orf49Q96NF6 230 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 LINC01587Q99440 93 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 NEU1Q99519 415 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 C20orf144Q9BQM9 153 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 MANBALQ9NQG1 85 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 LENEPQ9Y5L5 61 aa6.55□□□□□ -1.36
SMC4-213ENST00000472282 TRAV34A0A0B4J273 112 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 SMIM9A6NGZ8 99 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 ZNF705GA8MUZ8 300 aaPredicted RBP6.54□□□□□ -1.36
SMC4-213ENST00000472282 C11orf94C9JXX5 98 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 F6UZH7 168 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 IGLV2-11P01706 119 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 PRM2P04554 102 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 NMBP08949 121 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 RNASE4P34096 147 aaKnown RBP6.54□□□□□ -1.36
SMC4-213ENST00000472282 AKR1C3P42330 323 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 RRN3P1Q2M238 152 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 PRNTQ86SH4 94 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 HIST1H2BAQ96A08 127 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 TVP23CQ96ET8 276 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 LINC00479Q96M42 142 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 NIPSNAP3BQ9BS92 247 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 TREM1Q9NP99 234 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 PSG8Q9UQ74 426 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 KLK5Q9Y337 293 aaPredicted RBP6.54□□□□□ -1.36
SMC4-213ENST00000472282 VPS13DQ5THJ4 4388 aa6.54□□□□□ -1.36
SMC4-213ENST00000472282 LOC102723971A0A1B0GUV8 181 aa6.53□□□□□ -1.36
SMC4-213ENST00000472282 H7BYZ3 331 aa6.53□□□□□ -1.36
SMC4-213ENST00000472282 IFNA1P01562 189 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms