RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 TMEM88Q6PEY1 159 aa10.9□□□□□ -0.66
FDPS-208ENST00000470171 HYLS1Q96M11 299 aa10.9□□□□□ -0.66
FDPS-208ENST00000470171 PLA2G2EQ9NZK7 142 aa10.9□□□□□ -0.66
FDPS-208ENST00000470171 TRGV11A0A075B6L2 103 aa10.89□□□□□ -0.67
FDPS-208ENST00000470171 A0A0D9SG52 128 aa10.89□□□□□ -0.67
FDPS-208ENST00000470171 CTXND1A0A1B0GTU2 59 aa10.89□□□□□ -0.67
FDPS-208ENST00000470171 ARPC5O15511 151 aa10.89□□□□□ -0.67
FDPS-208ENST00000470171 BTN1A1Q13410 526 aa10.89□□□□□ -0.67
FDPS-208ENST00000470171 TDRG1Q3Y452 100 aa10.89□□□□□ -0.67
FDPS-208ENST00000470171 FAM159AQ6UWV7 190 aa10.89□□□□□ -0.67
FDPS-208ENST00000470171 UBE2DNLQ8IWF7 75 aa10.89□□□□□ -0.67
FDPS-208ENST00000470171 SPXQ9BT56 116 aa10.89□□□□□ -0.67
FDPS-208ENST00000470171 TRAV21A0A0B4J279 112 aa10.88□□□□□ -0.67
FDPS-208ENST00000470171 CCL18P55774 89 aa10.88□□□□□ -0.67
FDPS-208ENST00000470171 ZNF415Q09FC8 603 aa10.88□□□□□ -0.67
FDPS-208ENST00000470171 C11orf72Q8NBR9 251 aa10.88□□□□□ -0.67
FDPS-208ENST00000470171 STOML3Q8TAV4 291 aa10.88□□□□□ -0.67
FDPS-208ENST00000470171 KCNS1Q96KK3 526 aa10.88□□□□□ -0.67
FDPS-208ENST00000470171 TCEAL7Q9BRU2 100 aa10.88□□□□□ -0.67
FDPS-208ENST00000470171 TRGV2A0A075B6R0 118 aa10.87□□□□□ -0.67
FDPS-208ENST00000470171 UMAD1C9J7I0 102 aa10.87□□□□□ -0.67
FDPS-208ENST00000470171 SPINK4O60575 86 aa10.87□□□□□ -0.67
FDPS-208ENST00000470171 SAPCD1Q5SSQ6 148 aa10.87□□□□□ -0.67
FDPS-208ENST00000470171 LINC00336Q6ZUF6 198 aa10.87□□□□□ -0.67
FDPS-208ENST00000470171 GOLT1AQ6ZVE7 132 aa10.87□□□□□ -0.67
FDPS-208ENST00000470171 KCNRGQ8N5I3 272 aa10.87□□□□□ -0.67
FDPS-208ENST00000470171 ATG101Q9BSB4 218 aa10.87□□□□□ -0.67
FDPS-208ENST00000470171 KLF12Q9Y4X4 402 aa10.87□□□□□ -0.67
FDPS-208ENST00000470171 GAGE12BA1L429 117 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 G3V3Q6 166 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 GAGE7O76087 117 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 TCRAP04437 139 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 GAGE12FP0CL80 117 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 GAGE12GP0CL81 117 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 GAGE12IP0CL82 117 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 PRB4P10163 310 aaPredicted RBP10.86□□□□□ -0.67
FDPS-208ENST00000470171 PPT1P50897 306 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 Q8TAT8 98 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 SH3BGRL3Q9H299 93 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 TREM1Q9NP99 234 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 GSN-AS1Q9NRJ2 163 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 EPDR1Q9UM22 224 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 ARL2-SNX15V9GYD0 113 aa10.86□□□□□ -0.67
FDPS-208ENST00000470171 HMGB3O15347 200 aaKnown RBP10.85□□□□□ -0.67
FDPS-208ENST00000470171 SEC11BP0C7V7 166 aa10.85□□□□□ -0.67
FDPS-208ENST00000470171 SUMO1P63165 101 aaKnown RBP10.85□□□□□ -0.67
FDPS-208ENST00000470171 ZFP69Q49AA0 526 aa10.85□□□□□ -0.67
FDPS-208ENST00000470171 DPPA3Q6W0C5 159 aa10.85□□□□□ -0.67
FDPS-208ENST00000470171 CYB561D1Q8N8Q1 229 aa10.85□□□□□ -0.67
FDPS-208ENST00000470171 TMEM75Q8N9X5 138 aa10.85□□□□□ -0.67
FDPS-208ENST00000470171 HIST1H2BAQ96A08 127 aa10.85□□□□□ -0.67
FDPS-208ENST00000470171 TRGV1A0A0A0MS02 117 aa10.84□□□□□ -0.67
FDPS-208ENST00000470171 KANTRA0A1W2PQU2 76 aa10.84□□□□□ -0.67
FDPS-208ENST00000470171 F6UZH7 168 aa10.84□□□□□ -0.67
FDPS-208ENST00000470171 FHITP49789 147 aa10.84□□□□□ -0.67
FDPS-208ENST00000470171 OR5I1Q13606 314 aa10.84□□□□□ -0.67
FDPS-208ENST00000470171 SOHLH1Q5JUK2 328 aa10.84□□□□□ -0.67
FDPS-208ENST00000470171 CYTL1Q9NRR1 136 aa10.84□□□□□ -0.67
FDPS-208ENST00000470171 CIDEAO60543 219 aa10.83□□□□□ -0.68
FDPS-208ENST00000470171 NUDT3O95989 172 aa10.83□□□□□ -0.68
FDPS-208ENST00000470171 LGALSLQ3ZCW2 172 aaPredicted RBP10.83□□□□□ -0.68
FDPS-208ENST00000470171 PRR9Q5T870 116 aa10.83□□□□□ -0.68
FDPS-208ENST00000470171 EIF5AL1Q6IS14 154 aaKnown RBP10.83□□□□□ -0.68
FDPS-208ENST00000470171 Q6ZTI0 123 aa10.83□□□□□ -0.68
FDPS-208ENST00000470171 RASL10AQ92737 203 aa10.83□□□□□ -0.68
FDPS-208ENST00000470171 SDF2L1Q9HCN8 221 aa10.83□□□□□ -0.68
FDPS-208ENST00000470171 RPH3ALQ9UNE2 315 aa10.83□□□□□ -0.68
FDPS-208ENST00000470171 FLI1Q01543 452 aaPredicted RBP10.82□□□□□ -0.68
FDPS-208ENST00000470171 IQCF2Q8IXL9 164 aa10.82□□□□□ -0.68
FDPS-208ENST00000470171 PSG8Q9UQ74 426 aa10.82□□□□□ -0.68
FDPS-208ENST00000470171 TRAV26-1A0A087WT03 109 aa10.81□□□□□ -0.68
FDPS-208ENST00000470171 BCL2L11O43521 198 aa10.81□□□□□ -0.68
FDPS-208ENST00000470171 IFNA7P01567 189 aa10.81□□□□□ -0.68
FDPS-208ENST00000470171 BTF3P20290 206 aaKnown RBP10.81□□□□□ -0.68
FDPS-208ENST00000470171 SMUG1Q53HV7 270 aa10.81□□□□□ -0.68
FDPS-208ENST00000470171 PRO0255Q9UI72 69 aa10.81□□□□□ -0.68
FDPS-208ENST00000470171 HYDINQ4G0P3 5121 aa10.8□□□□□ -0.68
FDPS-208ENST00000470171 MAP1LC3B2A6NCE7 125 aa10.8□□□□□ -0.68
FDPS-208ENST00000470171 GGTLC3B5MD39 225 aa10.8□□□□□ -0.68
FDPS-208ENST00000470171 PFN1P07737 140 aaKnown RBP10.8□□□□□ -0.68
FDPS-208ENST00000470171 MAP1LC3BQ9GZQ8 125 aa10.8□□□□□ -0.68
FDPS-208ENST00000470171 TMPRSS5Q9H3S3 457 aa10.8□□□□□ -0.68
FDPS-208ENST00000470171 ZFP30Q9Y2G7 519 aa10.8□□□□□ -0.68
FDPS-208ENST00000470171 TRAV8-1A0A0A6YYK1 113 aa10.79□□□□□ -0.68
FDPS-208ENST00000470171 M0R2P5 195 aa10.79□□□□□ -0.68
FDPS-208ENST00000470171 PFDN1O60925 122 aa10.79□□□□□ -0.68
FDPS-208ENST00000470171 EIF3GO75821 320 aaKnown RBP eCLIP10.79□□□□□ -0.68
FDPS-208ENST00000470171 S100A9P06702 114 aaKnown RBP10.79□□□□□ -0.68
FDPS-208ENST00000470171 TPT1P13693 172 aaKnown RBP10.79□□□□□ -0.68
FDPS-208ENST00000470171 RAB5CP51148 216 aa10.79□□□□□ -0.68
FDPS-208ENST00000470171 GNG5P63218 68 aa10.79□□□□□ -0.68
FDPS-208ENST00000470171 ZNF726P1Q15940 193 aa10.79□□□□□ -0.68
FDPS-208ENST00000470171 TMEM183BQ1AE95 376 aa10.79□□□□□ -0.68
FDPS-208ENST00000470171 MUC21Q5SSG8 566 aa10.79□□□□□ -0.68
FDPS-208ENST00000470171 TMEM183AQ8IXX5 376 aa10.79□□□□□ -0.68
FDPS-208ENST00000470171 MBD3L1Q8WWY6 194 aa10.79□□□□□ -0.68
FDPS-208ENST00000470171 PTH2Q96A98 100 aa10.79□□□□□ -0.68
FDPS-208ENST00000470171 ZNF471Q9BX82 626 aaPredicted RBP10.79□□□□□ -0.68
FDPS-208ENST00000470171 FAM74A7A6NL05 159 aa10.78□□□□□ -0.68
FDPS-208ENST00000470171 HOXA5P20719 270 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms