RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ICOSQ9Y6W8 199 aa9.1□□□□□ -0.95
CPSF4-210ENST00000469897 C17orf112F2Z3M2 114 aa9.09□□□□□ -0.95
CPSF4-210ENST00000469897 OR7C2O60412 319 aa9.09□□□□□ -0.95
CPSF4-210ENST00000469897 NXPH4O95158 308 aa9.09□□□□□ -0.95
CPSF4-210ENST00000469897 CSN1S1P47710 185 aa9.09□□□□□ -0.95
CPSF4-210ENST00000469897 CRYBA4P53673 196 aa9.09□□□□□ -0.95
CPSF4-210ENST00000469897 LYPD5Q6UWN5 251 aa9.09□□□□□ -0.95
CPSF4-210ENST00000469897 LINC00299Q6ZSB3 139 aa9.09□□□□□ -0.95
CPSF4-210ENST00000469897 Q8N1X5 172 aa9.09□□□□□ -0.95
CPSF4-210ENST00000469897 S100ZQ8WXG8 99 aa9.09□□□□□ -0.95
CPSF4-210ENST00000469897 MRPL32Q9BYC8 188 aaKnown RBP9.09□□□□□ -0.95
CPSF4-210ENST00000469897 SCRT2Q9NQ03 307 aa9.09□□□□□ -0.95
CPSF4-210ENST00000469897 INMT-MINDY4F8WBC2 141 aa9.08□□□□□ -0.96
CPSF4-210ENST00000469897 EIF3GO75821 320 aaKnown RBP eCLIP9.08□□□□□ -0.96
CPSF4-210ENST00000469897 FUSP35637 526 aaKnown RBP eCLIP9.08□□□□□ -0.96
CPSF4-210ENST00000469897 CYCSP99999 105 aaKnown RBP9.08□□□□□ -0.96
CPSF4-210ENST00000469897 IFITM3Q01628 133 aa9.08□□□□□ -0.96
CPSF4-210ENST00000469897 SLAQ13239 276 aa9.08□□□□□ -0.96
CPSF4-210ENST00000469897 TRBV7-9A0A0J9YWB2 115 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 RBAKDNA6NC62 111 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 UPK1BO75841 260 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 SFTA3P0C7M3 94 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 H2BFSP57053 126 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 ZNF415Q09FC8 603 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 ZNF266Q14584 549 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 MRPL23Q16540 153 aaKnown RBP9.07□□□□□ -0.96
CPSF4-210ENST00000469897 FFAR4Q5NUL3 377 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 Q6ZRN7 208 aaPredicted RBP9.07□□□□□ -0.96
CPSF4-210ENST00000469897 LYPD1Q8N2G4 141 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 PPP1R1CQ8WVI7 109 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 ZNF479Q96JC4 524 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 HYLS1Q96M11 299 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 ATP5SQ99766 215 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 KCNIP2Q9NS61 270 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 DNAH5Q8TE73 4624 aa9.07□□□□□ -0.96
CPSF4-210ENST00000469897 TRGV4A0A0C4DH28 118 aa9.06□□□□□ -0.96
CPSF4-210ENST00000469897 DIRC3C9JPN6 131 aa9.06□□□□□ -0.96
CPSF4-210ENST00000469897 UBE2L3P68036 154 aaKnown RBP9.06□□□□□ -0.96
CPSF4-210ENST00000469897 NEGR1Q7Z3B1 354 aa9.06□□□□□ -0.96
CPSF4-210ENST00000469897 SCGB1C1Q8TD33 95 aa9.06□□□□□ -0.96
CPSF4-210ENST00000469897 SMIM3Q9BZL3 60 aa9.06□□□□□ -0.96
CPSF4-210ENST00000469897 PGPA6NDG6 321 aa9.05□□□□□ -0.96
CPSF4-210ENST00000469897 GNRH2O43555 120 aa9.05□□□□□ -0.96
CPSF4-210ENST00000469897 TMEM183BQ1AE95 376 aa9.05□□□□□ -0.96
CPSF4-210ENST00000469897 FAM159AQ6UWV7 190 aa9.05□□□□□ -0.96
CPSF4-210ENST00000469897 IQCF2Q8IXL9 164 aa9.05□□□□□ -0.96
CPSF4-210ENST00000469897 TMEM183AQ8IXX5 376 aa9.05□□□□□ -0.96
CPSF4-210ENST00000469897 RASL10AQ92737 203 aa9.05□□□□□ -0.96
CPSF4-210ENST00000469897 PGPEP1Q9NXJ5 209 aa9.05□□□□□ -0.96
CPSF4-210ENST00000469897 MBD2Q9UBB5 411 aa9.05□□□□□ -0.96
CPSF4-210ENST00000469897 HSPB11Q9Y547 144 aa9.05□□□□□ -0.96
CPSF4-210ENST00000469897 K7EQD1 137 aa9.04□□□□□ -0.96
CPSF4-210ENST00000469897 SSNA1O43805 119 aa9.04□□□□□ -0.96
CPSF4-210ENST00000469897 MPC2O95563 127 aa9.04□□□□□ -0.96
CPSF4-210ENST00000469897 IFNA5P01569 189 aa9.04□□□□□ -0.96
CPSF4-210ENST00000469897 RPL12P30050 165 aaKnown RBP9.04□□□□□ -0.96
CPSF4-210ENST00000469897 Q6AWC8 147 aa9.04□□□□□ -0.96
CPSF4-210ENST00000469897 SPXQ9BT56 116 aa9.04□□□□□ -0.96
CPSF4-210ENST00000469897 WFDC1Q9HC57 220 aa9.04□□□□□ -0.96
CPSF4-210ENST00000469897 RPH3ALQ9UNE2 315 aa9.04□□□□□ -0.96
CPSF4-210ENST00000469897 TRAV9-2A0A087WT02 112 aa9.03□□□□□ -0.96
CPSF4-210ENST00000469897 GYPEP15421 78 aa9.03□□□□□ -0.96
CPSF4-210ENST00000469897 TAS2R45P59539 299 aa9.03□□□□□ -0.96
CPSF4-210ENST00000469897 KHDC3LQ587J8 217 aa9.03□□□□□ -0.96
CPSF4-210ENST00000469897 OR10G4Q8NGN3 311 aa9.03□□□□□ -0.96
CPSF4-210ENST00000469897 CMTM2Q8TAZ6 248 aa9.03□□□□□ -0.96
CPSF4-210ENST00000469897 MARVELD1Q9BSK0 173 aa9.03□□□□□ -0.96
CPSF4-210ENST00000469897 NAGKQ9UJ70 344 aa9.03□□□□□ -0.96
CPSF4-210ENST00000469897 LENEPQ9Y5L5 61 aa9.03□□□□□ -0.96
CPSF4-210ENST00000469897 LY96Q9Y6Y9 160 aa9.03□□□□□ -0.96
CPSF4-210ENST00000469897 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.97
CPSF4-210ENST00000469897 TRGV11A0A075B6L2 103 aa9.02□□□□□ -0.97
CPSF4-210ENST00000469897 EREGO14944 169 aa9.02□□□□□ -0.97
CPSF4-210ENST00000469897 SRIP30626 198 aa9.02□□□□□ -0.97
CPSF4-210ENST00000469897 WFDC10BQ8IUB3 73 aa9.02□□□□□ -0.97
CPSF4-210ENST00000469897 PCNPQ8WW12 178 aaKnown RBP9.02□□□□□ -0.97
CPSF4-210ENST00000469897 TVP23CQ96ET8 276 aa9.02□□□□□ -0.97
CPSF4-210ENST00000469897 OTORQ9NRC9 128 aa9.02□□□□□ -0.97
CPSF4-210ENST00000469897 A0A1W2PPV4 95 aa9.01□□□□□ -0.97
CPSF4-210ENST00000469897 DNAH10OSP0CZ25 163 aa9.01□□□□□ -0.97
CPSF4-210ENST00000469897 ERVFC1-1P60608 527 aa9.01□□□□□ -0.97
CPSF4-210ENST00000469897 FAM74A1Q5RGS3 127 aa9.01□□□□□ -0.97
CPSF4-210ENST00000469897 GOLT1AQ6ZVE7 132 aa9.01□□□□□ -0.97
CPSF4-210ENST00000469897 NFE4Q86UQ8 179 aa9.01□□□□□ -0.97
CPSF4-210ENST00000469897 OR4C5Q8NGB2 326 aa9.01□□□□□ -0.97
CPSF4-210ENST00000469897 TMED6Q8WW62 240 aa9.01□□□□□ -0.97
CPSF4-210ENST00000469897 MUC4Q99102 2169 aa9.01□□□□□ -0.97
CPSF4-210ENST00000469897 A0A087WTM6 91 aa9□□□□□ -0.97
CPSF4-210ENST00000469897 TRAV8-1A0A0A6YYK1 113 aa9□□□□□ -0.97
CPSF4-210ENST00000469897 IGHV3-16A0A0C4DH30 117 aa9□□□□□ -0.97
CPSF4-210ENST00000469897 LOC100131303A0A0U1RQF7 123 aa9□□□□□ -0.97
CPSF4-210ENST00000469897 HMGB3O15347 200 aaKnown RBP9□□□□□ -0.97
CPSF4-210ENST00000469897 ORM1P02763 201 aa9□□□□□ -0.97
CPSF4-210ENST00000469897 PET100P0DJ07 73 aa9□□□□□ -0.97
CPSF4-210ENST00000469897 EVI2AP22794 236 aa9□□□□□ -0.97
CPSF4-210ENST00000469897 ACOT6Q3I5F7 207 aaPredicted RBP9□□□□□ -0.97
CPSF4-210ENST00000469897 TDRG1Q3Y452 100 aa9□□□□□ -0.97
CPSF4-210ENST00000469897 SGK494Q96LW2 274 aa9□□□□□ -0.97
CPSF4-210ENST00000469897 TREM1Q9NP99 234 aa9□□□□□ -0.97
CPSF4-210ENST00000469897 BATF3Q9NR55 127 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms