RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 TCRAP04437 139 aa2.77□□□□□ -1.97
SCFD1-205ENST00000469043 DEFA4P12838 97 aa2.77□□□□□ -1.97
SCFD1-205ENST00000469043 CSRP1P21291 193 aaKnown RBP2.77□□□□□ -1.97
SCFD1-205ENST00000469043 RBP2P50120 134 aa2.77□□□□□ -1.97
SCFD1-205ENST00000469043 DYNLT1P63172 113 aa2.77□□□□□ -1.97
SCFD1-205ENST00000469043 C7orf65Q6ZTY9 151 aa2.77□□□□□ -1.97
SCFD1-205ENST00000469043 LYPD6Q86Y78 171 aa2.77□□□□□ -1.97
SCFD1-205ENST00000469043 Q8NDZ9 215 aa2.77□□□□□ -1.97
SCFD1-205ENST00000469043 OR8B2Q96RD0 313 aa2.77□□□□□ -1.97
SCFD1-205ENST00000469043 FAM215AQ9Y5M1 114 aa2.77□□□□□ -1.97
SCFD1-205ENST00000469043 PLXNA3P51805 1871 aa2.77□□□□□ -1.97
SCFD1-205ENST00000469043 TRAV7A0A075B6U4 112 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 OR2T8A6NH00 312 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 ZNF727A8MUV8 499 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 A8MWV9 139 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 GNRH2O43555 120 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 FOXA3P55318 350 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-205ENST00000469043 QRFPP83859 136 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 DIAPH2-AS1Q14236 149 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 GLIPR1L1Q6UWM5 242 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 OR4B1Q8NGF8 309 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 AQP3Q92482 292 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 NIT2Q9NQR4 276 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 MINOS1-NBL1R4GNA1 71 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 ZSWIM8A7E2V4 1837 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 SIP14410 1827 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 KIAA1549Q9HCM3 1950 aa2.76□□□□□ -1.97
SCFD1-205ENST00000469043 PVALEFA0A1B0GWK0 134 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 H7C2G1 150 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 SDCBPO00560 298 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-205ENST00000469043 SLC25A5P05141 298 aaKnown RBP2.75□□□□□ -1.97
SCFD1-205ENST00000469043 GUCA1AP43080 201 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-205ENST00000469043 AKR1D1P51857 326 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 AQP4P55087 323 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 EBI3Q14213 229 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 KRTAP25-1Q3LHN0 102 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 LYZL1Q6UWQ5 148 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 PATE2Q6UY27 113 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 TCTEX1D1Q8N7M0 179 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 MORN4Q8NDC4 146 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 WFDC11Q8NEX6 87 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 NAA38Q9BRA0 125 aaKnown RBP2.75□□□□□ -1.97
SCFD1-205ENST00000469043 SCRT1Q9BWW7 348 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 ANK1P16157 1881 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 PDCD11Q14690 1871 aaKnown RBP2.75□□□□□ -1.97
SCFD1-205ENST00000469043 MYO16Q9Y6X6 1858 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 MICAL3Q7RTP6 2002 aa2.75□□□□□ -1.97
SCFD1-205ENST00000469043 MYLKQ15746 1914 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 IGLV3-16A0A075B6K0 115 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 IGLV3-9A0A075B6K5 115 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 TRAV27A0A087WT01 109 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 TRBV10-2A0A0K0K1G8 114 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 FAM236AA0A1B0GUQ0 79 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 FAM236BA0A1B0GV22 79 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 C20orf202A1L168 122 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 CORTO00230 105 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 UQCRQO14949 82 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 TIMM17BO60830 172 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 CRYGAP11844 174 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 COX6A1P12074 109 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 ZNF14P17017 642 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-205ENST00000469043 FXYD2P54710 66 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 KLRD1Q13241 179 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 TMEM155Q4W5P6 130 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 FAM27BQ5VT28 67 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 SPINT4Q6UDR6 99 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 Q6ZS52 159 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 SLC35E3Q7Z769 313 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 OR10AC1Q8NH08 325 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 DEDD2Q8WXF8 326 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 MRPS24Q96EL2 167 aaKnown RBP2.74□□□□□ -1.97
SCFD1-205ENST00000469043 PPP3R2Q96LZ3 170 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 MCEEQ96PE7 176 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 DUSP21Q9H596 190 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 BCL2L10Q9HD36 194 aa2.74□□□□□ -1.97
SCFD1-205ENST00000469043 SOX21Q9Y651 276 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-205ENST00000469043 KIAA0100Q14667 2235 aaKnown RBP2.73□□□□□ -1.97
SCFD1-205ENST00000469043 APODP05090 189 aa2.73□□□□□ -1.97
SCFD1-205ENST00000469043 S100A8P05109 93 aa2.73□□□□□ -1.97
SCFD1-205ENST00000469043 ZNF705BP0CI00 300 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-205ENST00000469043 SNRPFP62306 86 aaKnown RBP2.73□□□□□ -1.97
SCFD1-205ENST00000469043 RELAQ04206 551 aa2.73□□□□□ -1.97
SCFD1-205ENST00000469043 ZNF181Q2M3W8 571 aa2.73□□□□□ -1.97
SCFD1-205ENST00000469043 SCIMPQ6UWF3 145 aa2.73□□□□□ -1.97
SCFD1-205ENST00000469043 TMEM136Q6ZRR5 245 aa2.73□□□□□ -1.97
SCFD1-205ENST00000469043 RNF182Q8N6D2 247 aa2.73□□□□□ -1.97
SCFD1-205ENST00000469043 DIRC1Q969H9 104 aa2.73□□□□□ -1.97
SCFD1-205ENST00000469043 PKMYT1Q99640 499 aa2.73□□□□□ -1.97
SCFD1-205ENST00000469043 TMEM191AQ9H0A3 160 aa2.73□□□□□ -1.97
SCFD1-205ENST00000469043 HHLA3Q9XRX5 114 aa2.73□□□□□ -1.97
SCFD1-205ENST00000469043 HELZP42694 1942 aaKnown RBP2.73□□□□□ -1.97
SCFD1-205ENST00000469043 LOC100130705A0A1B0GUX0 176 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 HBDP02042 147 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 SHBGP04278 402 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 HLA-DRB4P13762 266 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 FGF7P21781 194 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 FUSP35637 526 aaKnown RBP eCLIP2.72□□□□□ -1.97
SCFD1-205ENST00000469043 SNRPD3P62318 126 aaKnown RBP2.72□□□□□ -1.97
SCFD1-205ENST00000469043 PLGLB1Q02325 96 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 CDK5R1Q15078 307 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms