RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 ZNF727A8MUV8 499 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 A8MZ25 164 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 K7EQM0 130 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 CRXO43186 299 aaPredicted RBP4.36□□□□□ -1.71
USP39-213ENST00000467885 GCGP01275 180 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 IGKV3-20P01619 116 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 SFTA3P0C7M3 94 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 CRISP2P16562 243 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 ADCYAP1P18509 176 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 ZNF80P51504 273 aaPredicted RBP4.36□□□□□ -1.71
USP39-213ENST00000467885 HIST1H1AQ02539 215 aaPredicted RBP4.36□□□□□ -1.71
USP39-213ENST00000467885 FAM74A3Q4VXF1 159 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 SAPCD1Q5SSQ6 148 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 PRNTQ86SH4 94 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 TMEM183AQ8IXX5 376 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 CSNK1G2-AS1Q8NCQ2 148 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 OR4B1Q8NGF8 309 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 FMC1Q96HJ9 113 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 C8orf49Q96NF6 230 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 SEC11CQ9BY50 192 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 AURKAIP1Q9NWT8 199 aaPredicted RBP4.36□□□□□ -1.71
USP39-213ENST00000467885 RPH3ALQ9UNE2 315 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 LENEPQ9Y5L5 61 aa4.36□□□□□ -1.71
USP39-213ENST00000467885 PGPEP1LA6NFU8 196 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 KLLNB2CW77 178 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 C9JCJ5 164 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 K7EN84 100 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 AKR1C3P42330 323 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 CEBPGP53567 150 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 RPL23P62829 140 aaKnown RBP4.35□□□□□ -1.71
USP39-213ENST00000467885 OR5I1Q13606 314 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 ZNF674Q2M3X9 581 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 TMEM78Q5T7P6 136 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 GTSCR1Q86UQ5 136 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 Q8TAT8 98 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 ODF3Q96PU9 254 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 SMIM7Q9BQ49 75 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 CSTL1Q9H114 145 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 C11orf21Q9P2W6 132 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 CARHSP1Q9Y2V2 147 aaKnown RBP4.35□□□□□ -1.71
USP39-213ENST00000467885 LY96Q9Y6Y9 160 aa4.35□□□□□ -1.71
USP39-213ENST00000467885 DNHD1Q96M86 4753 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 C19orf71A6NCJ1 209 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 FABP5P3A8MUU1 101 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 F8W036 122 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 K7EIL1 84 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 M0R2Z0 102 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 PRB2P02812 416 aaPredicted RBP4.34□□□□□ -1.71
USP39-213ENST00000467885 IGHV4-30-4P0DP06 118 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 RPL35AP18077 110 aaKnown RBP4.34□□□□□ -1.71
USP39-213ENST00000467885 RNASE4P34096 147 aaKnown RBP4.34□□□□□ -1.71
USP39-213ENST00000467885 GNG4P50150 75 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 FXYD7P58549 80 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 UBE2G1P62253 170 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 CENPWQ5EE01 88 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 PRR9Q5T870 116 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 LINC01551Q86U37 167 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 STHQ8IWL8 128 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 C1orf158Q8N1D5 194 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 NHLRC2Q8NBF2 726 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 NUDT10Q8NFP7 164 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 SMIM12Q96EX1 92 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 NUDT11Q96G61 164 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 ZC2HC1AQ96GY0 325 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 NAT8Q9UHE5 227 aa4.34□□□□□ -1.71
USP39-213ENST00000467885 TRAV12-2A0A075B6T6 113 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 LOC102724200A0A096LPH7 203 aaPredicted RBP4.33□□□□□ -1.72
USP39-213ENST00000467885 KIR2DL5BA0A0G2JN68 375 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 KIR2DL5BA0A0G2JPC4 375 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 KRBOX1C9JBD0 128 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 PRM2P04554 102 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 GPX1P07203 203 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 RBMY1A1P0DJD3 496 aaKnown RBP4.33□□□□□ -1.72
USP39-213ENST00000467885 RBMY1CP0DJD4 496 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 TSPOP30536 169 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 CDKN1BP46527 198 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 RBMY1FQ15415 496 aaKnown RBP4.33□□□□□ -1.72
USP39-213ENST00000467885 SPINK13Q1W4C9 94 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 SMUG1Q53HV7 270 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 Q6AWC8 147 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 MORN3Q6PF18 240 aaPredicted RBP4.33□□□□□ -1.72
USP39-213ENST00000467885 Q86TA4 180 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 KIR2DL5AQ8N109 375 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 KIR2DL5BQ8NHK3 375 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 TUBA4BQ9H853 241 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 SRD5A3Q9H8P0 318 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 XCL2Q9UBD3 114 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 ANK2Q01484 3957 aa4.33□□□□□ -1.72
USP39-213ENST00000467885 MGAM2Q2M2H8 2515 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 CMYA5Q8N3K9 4069 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 TRAV12-3A0A0B4J271 114 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 IGKV3D-20A0A0C4DH25 116 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 C7orf71A4D174 169 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 GNRH2O43555 120 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 SH2D1AO60880 128 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 AMBPP02760 352 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 AZU1P20160 251 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 LEPP41159 167 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 NUTF2P61970 127 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms