RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 NHP2Q9NX24 153 aaKnown RBP10.02□□□□□ -0.81
PDZRN3-205ENST00000466780 TRAV40A0A0B4J280 105 aa10.02□□□□□ -0.81
PDZRN3-205ENST00000466780 ATP5LO75964 103 aa10.02□□□□□ -0.81
PDZRN3-205ENST00000466780 MRPL35Q9NZE8 188 aaKnown RBP10.02□□□□□ -0.81
PDZRN3-205ENST00000466780 RPL24P83731 157 aaKnown RBP10.01□□□□□ -0.81
PDZRN3-205ENST00000466780 Q8N6K4 173 aa10.01□□□□□ -0.81
PDZRN3-205ENST00000466780 TMEM160Q9NX00 188 aa10.01□□□□□ -0.81
PDZRN3-205ENST00000466780 SMPXQ9UHP9 88 aa10.01□□□□□ -0.81
PDZRN3-205ENST00000466780 GRNP28799 593 aaKnown RBP10.01□□□□□ -0.81
PDZRN3-205ENST00000466780 NRACQ8N912 160 aa10.01□□□□□ -0.81
PDZRN3-205ENST00000466780 TRAV26-2A0A0B4J265 109 aa10□□□□□ -0.81
PDZRN3-205ENST00000466780 PRTN3P24158 256 aa10□□□□□ -0.81
PDZRN3-205ENST00000466780 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10□□□□□ -0.81
PDZRN3-205ENST00000466780 VKORC1Q9BQB6 163 aa10□□□□□ -0.81
PDZRN3-205ENST00000466780 IGF2RP11717 2491 aa10□□□□□ -0.81
PDZRN3-205ENST00000466780 IGHV7-81A0A0B4J1V7 117 aa10□□□□□ -0.81
PDZRN3-205ENST00000466780 E9PLD3 99 aa10□□□□□ -0.81
PDZRN3-205ENST00000466780 K7ENP7 123 aa10□□□□□ -0.81
PDZRN3-205ENST00000466780 HLA-DRB4P13762 266 aa10□□□□□ -0.81
PDZRN3-205ENST00000466780 AGPAT4-IT1Q9H0P7 198 aa10□□□□□ -0.81
PDZRN3-205ENST00000466780 ZFAND3Q9H8U3 227 aa10□□□□□ -0.81
PDZRN3-205ENST00000466780 HLA-DRB4X5D2U9 266 aa10□□□□□ -0.81
PDZRN3-205ENST00000466780 AGRNO00468 2067 aa10□□□□□ -0.81
PDZRN3-205ENST00000466780 IGHV3-66A0A0C4DH42 116 aa9.99□□□□□ -0.81
PDZRN3-205ENST00000466780 BUB3O43684 328 aa9.99□□□□□ -0.81
PDZRN3-205ENST00000466780 IGHV7-4-1A0A0J9YVY3 117 aa9.99□□□□□ -0.81
PDZRN3-205ENST00000466780 RBAKDNA6NC62 111 aa9.99□□□□□ -0.81
PDZRN3-205ENST00000466780 M0R1W7 72 aa9.99□□□□□ -0.81
PDZRN3-205ENST00000466780 SRSF1Q07955 248 aaKnown RBP eCLIP9.99□□□□□ -0.81
PDZRN3-205ENST00000466780 Q6ZQT7 251 aa9.99□□□□□ -0.81
PDZRN3-205ENST00000466780 PRSS47A8MTI9 375 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 IGLL5B9A064 214 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 CLPSL1A2RUU4 121 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 SCGB2A1O75556 95 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 LAGE3Q14657 143 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 VMO1Q7Z5L0 202 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 ZNF502Q8TBZ5 544 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 ATRXP46100 2492 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 CACNA1BQ00975 2339 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 IGHV3OR16-13A0A075B7E8 117 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 IGHV3-74A0A0B4J1X5 117 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 EFNA4P52798 201 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 EBI3Q14213 229 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 C15orf32Q32M92 178 aa9.98□□□□□ -0.81
PDZRN3-205ENST00000466780 A0A087WX48 190 aa9.97□□□□□ -0.81
PDZRN3-205ENST00000466780 TRAV8-2A0A0B4J237 113 aa9.97□□□□□ -0.81
PDZRN3-205ENST00000466780 WFDC2Q14508 124 aa9.97□□□□□ -0.81
PDZRN3-205ENST00000466780 MYOZ3Q8TDC0 251 aa9.97□□□□□ -0.81
PDZRN3-205ENST00000466780 CLEC3BP05452 202 aa9.97□□□□□ -0.81
PDZRN3-205ENST00000466780 TMEM11P17152 192 aa9.97□□□□□ -0.81
PDZRN3-205ENST00000466780 C12orf74Q32Q52 190 aa9.97□□□□□ -0.81
PDZRN3-205ENST00000466780 FOXI2Q6ZQN5 318 aa9.97□□□□□ -0.81
PDZRN3-205ENST00000466780 Q8N9W7 124 aa9.97□□□□□ -0.81
PDZRN3-205ENST00000466780 UFC1Q9Y3C8 167 aa9.97□□□□□ -0.81
PDZRN3-205ENST00000466780 CCDC144NLQ6NUI1 221 aa9.96□□□□□ -0.81
PDZRN3-205ENST00000466780 SLC50A1Q9BRV3 221 aa9.96□□□□□ -0.81
PDZRN3-205ENST00000466780 SPANXB1Q9NS25 103 aaPredicted RBP9.96□□□□□ -0.81
PDZRN3-205ENST00000466780 MSRB2Q9Y3D2 182 aa9.96□□□□□ -0.81
PDZRN3-205ENST00000466780 CCL21O00585 134 aa9.96□□□□□ -0.82
PDZRN3-205ENST00000466780 ZNF479Q96JC4 524 aa9.96□□□□□ -0.82
PDZRN3-205ENST00000466780 MED13LQ71F56 2210 aa9.96□□□□□ -0.82
PDZRN3-205ENST00000466780 ZNF207O43670 478 aaKnown RBP9.95□□□□□ -0.82
PDZRN3-205ENST00000466780 TAL2Q16559 108 aa9.95□□□□□ -0.82
PDZRN3-205ENST00000466780 SAMD13Q5VXD3 122 aa9.95□□□□□ -0.82
PDZRN3-205ENST00000466780 IGHV3-49A0A0A0MS15 119 aa9.95□□□□□ -0.82
PDZRN3-205ENST00000466780 GOSR1O95249 250 aa9.95□□□□□ -0.82
PDZRN3-205ENST00000466780 FAM110DQ8TAY7 271 aaPredicted RBP9.95□□□□□ -0.82
PDZRN3-205ENST00000466780 COL6A6A6NMZ7 2263 aa9.94□□□□□ -0.82
PDZRN3-205ENST00000466780 TRBV7-3A0A075B6L6 115 aa9.94□□□□□ -0.82
PDZRN3-205ENST00000466780 IGHV4-4A0A075B6R2 117 aa9.94□□□□□ -0.82
PDZRN3-205ENST00000466780 RAB9AP51151 201 aa9.94□□□□□ -0.82
PDZRN3-205ENST00000466780 ECSCRQ19T08 205 aa9.94□□□□□ -0.82
PDZRN3-205ENST00000466780 TIMD4Q96H15 378 aa9.94□□□□□ -0.82
PDZRN3-205ENST00000466780 CCDC140Q96MF4 163 aa9.94□□□□□ -0.82
PDZRN3-205ENST00000466780 F8W1H4 67 aa9.94□□□□□ -0.82
PDZRN3-205ENST00000466780 H3BMG7 143 aa9.94□□□□□ -0.82
PDZRN3-205ENST00000466780 TMEM78Q5T7P6 136 aa9.94□□□□□ -0.82
PDZRN3-205ENST00000466780 AMTNQ6UX39 209 aa9.94□□□□□ -0.82
PDZRN3-205ENST00000466780 GTSF1LQ9H1H1 148 aa9.94□□□□□ -0.82
PDZRN3-205ENST00000466780 AZU1P20160 251 aa9.93□□□□□ -0.82
PDZRN3-205ENST00000466780 PLNP26678 52 aa9.93□□□□□ -0.82
PDZRN3-205ENST00000466780 HIST1H4GQ99525 98 aa9.93□□□□□ -0.82
PDZRN3-205ENST00000466780 SPTBN1Q01082 2364 aaKnown RBP9.93□□□□□ -0.82
PDZRN3-205ENST00000466780 OOSP1A8MZH6 123 aa9.93□□□□□ -0.82
PDZRN3-205ENST00000466780 CDSNQ15517 529 aa9.93□□□□□ -0.82
PDZRN3-205ENST00000466780 PRR9Q5T870 116 aa9.93□□□□□ -0.82
PDZRN3-205ENST00000466780 SPANXN1Q5VSR9 72 aa9.93□□□□□ -0.82
PDZRN3-205ENST00000466780 CLEC19AQ6UXS0 136 aa9.93□□□□□ -0.82
PDZRN3-205ENST00000466780 C8orf86Q6ZUL3 223 aa9.93□□□□□ -0.82
PDZRN3-205ENST00000466780 SH2D6Q7Z4S9 175 aa9.93□□□□□ -0.82
PDZRN3-205ENST00000466780 TSSC4Q9Y5U2 329 aaPredicted RBP9.93□□□□□ -0.82
PDZRN3-205ENST00000466780 HRNRQ86YZ3 2850 aaPredicted RBP9.93□□□□□ -0.82
PDZRN3-205ENST00000466780 H3BVH4 76 aa9.92□□□□□ -0.82
PDZRN3-205ENST00000466780 ATP6V0E1O15342 81 aa9.92□□□□□ -0.82
PDZRN3-205ENST00000466780 C9orf47Q6ZRZ4 202 aa9.92□□□□□ -0.82
PDZRN3-205ENST00000466780 SMIM2Q9BVW6 85 aa9.92□□□□□ -0.82
PDZRN3-205ENST00000466780 SVEP1Q4LDE5 3571 aa9.92□□□□□ -0.82
PDZRN3-205ENST00000466780 F8VRH5 84 aa9.92□□□□□ -0.82
PDZRN3-205ENST00000466780 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.92□□□□□ -0.82
PDZRN3-205ENST00000466780 ZFP36P26651 326 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms