RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 RPEQ96AT9 228 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 YAE1D1Q9NRH1 226 aa9.03□□□□□ -0.96
TRAPPC3-205ENST00000462715 A0A087WX48 190 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 IGKCP01834 107 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 HOXB4P17483 251 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 TEX36Q5VZQ5 186 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 SMIM20Q8N5G0 67 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 A0A096LNT2 108 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 TRAV5A0A0B4J249 113 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 WI2-2373I1.2A0A1W2PRP0 233 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 PGPA6NDG6 321 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 PRSS29PA6NIE9 313 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 BRI3O95415 125 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 TCRAP04437 139 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 TWIST1Q15672 202 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 FAM201AQ5SY85 155 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 DEFB108BQ8NET1 73 aa9.02□□□□□ -0.97
TRAPPC3-205ENST00000462715 TET2Q6N021 2002 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 TRBV20-1A0A075B6N2 111 aa9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 FCN3O75636 299 aa9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 NDUFV3P56181 108 aaKnown RBP9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 ODF1Q14990 250 aa9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 PPP1R35Q8TAP8 253 aa9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 SPANXDQ9BXN6 97 aa9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 TIMM8BQ9Y5J9 83 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 UPK2O00526 184 aa9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 DPM2O94777 84 aa9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 PYYP10082 97 aa9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 RNASE2P10153 161 aaKnown RBP9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 SMCPP49901 116 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 SUB1P53999 127 aaKnown RBP eCLIP9.01□□□□□ -0.972e-7■■□□□ 14.2
TRAPPC3-205ENST00000462715 TM4SF20Q53R12 229 aa9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 FAM104BQ5XKR9 115 aa9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 Q86TA4 180 aa9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 NFE4Q86UQ8 179 aa9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 CIARTQ8N365 385 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 ZNF469Q96JG9 3925 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC3-205ENST00000462715 TRBV7-3A0A075B6L6 115 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 ZNF785A8K8V0 405 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 WNT9BO14905 357 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 HOXA3O43365 443 aaPredicted RBP9□□□□□ -0.97
TRAPPC3-205ENST00000462715 GAGE2BQ13066 116 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 GAGE2EQ4V326 116 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 MAPK1IP1LQ8NDC0 245 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 CITED2Q99967 270 aaPredicted RBP9□□□□□ -0.97
TRAPPC3-205ENST00000462715 OTORQ9NRC9 128 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 GAGE2DQ9UEU5 116 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 HIVEP1P15822 2718 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 IGHV3OR15-7A0A075B7D8 119 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 CNIH1O95406 144 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 IL4P05112 153 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 IFITM1P13164 125 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 LMO4P61968 165 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 GNG5P63218 68 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 HOXA4Q00056 320 aaPredicted RBP9□□□□□ -0.97
TRAPPC3-205ENST00000462715 FHL3Q13643 280 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 MORN5Q5VZ52 161 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 PATE2Q6UY27 113 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 SPANXCQ9NY87 97 aa9□□□□□ -0.97
TRAPPC3-205ENST00000462715 FCER1GP30273 86 aa8.99□□□□□ -0.97
TRAPPC3-205ENST00000462715 OR13A1Q8NGR1 328 aa8.99□□□□□ -0.97
TRAPPC3-205ENST00000462715 DKK2Q9UBU2 259 aa8.99□□□□□ -0.97
TRAPPC3-205ENST00000462715 IGKV2D-26A0A0A0MRZ7 120 aa8.99□□□□□ -0.97
TRAPPC3-205ENST00000462715 ARMS2P0C7Q2 107 aa8.99□□□□□ -0.97
TRAPPC3-205ENST00000462715 MRPL23Q16540 153 aaKnown RBP8.99□□□□□ -0.97
TRAPPC3-205ENST00000462715 AMTNQ6UX39 209 aa8.99□□□□□ -0.97
TRAPPC3-205ENST00000462715 B4DSR2 109 aa8.98□□□□□ -0.97
TRAPPC3-205ENST00000462715 RBP4P02753 201 aa8.98□□□□□ -0.97
TRAPPC3-205ENST00000462715 LINC00205P59089 165 aa8.98□□□□□ -0.97
TRAPPC3-205ENST00000462715 TTC32Q5I0X7 151 aa8.98□□□□□ -0.97
TRAPPC3-205ENST00000462715 VKORC1L1Q8N0U8 176 aa8.98□□□□□ -0.97
TRAPPC3-205ENST00000462715 CARD19Q96LW7 228 aa8.98□□□□□ -0.97
TRAPPC3-205ENST00000462715 LINC01600Q96MT4 127 aa8.98□□□□□ -0.97
TRAPPC3-205ENST00000462715 HINT2Q9BX68 163 aa8.98□□□□□ -0.97
TRAPPC3-205ENST00000462715 SLC25A39Q9BZJ4 359 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC3-205ENST00000462715 KAAG1Q9UBP8 84 aa8.98□□□□□ -0.97
TRAPPC3-205ENST00000462715 ZANQ9Y493 2812 aa8.98□□□□□ -0.97
TRAPPC3-205ENST00000462715 ACANP16112 2415 aa8.98□□□□□ -0.97
TRAPPC3-205ENST00000462715 IGHV4-31P0DP07 118 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 UBE2D3P61077 147 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 UBE2D2P62837 147 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 ERHP84090 104 aaKnown RBP8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 ASPHD1Q5U4P2 390 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 MORN3Q6PF18 240 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 LINC01356Q8N9X3 169 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 TMEM75Q8N9X5 138 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 HIST1H4GQ99525 98 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 CR1P17927 2039 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 A8MWV9 139 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 D6R8Y8 96 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 FAM106CPP0CH98 169 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 TMEM30BQ3MIR4 351 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 FAM106AQ4KMX7 169 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 C5orf47Q569G3 176 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 LYPD2Q6UXB3 125 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 CCL13Q99616 98 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 NXT2Q9NPJ8 142 aaKnown RBP8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 GNG12Q9UBI6 72 aa8.97□□□□□ -0.97
TRAPPC3-205ENST00000462715 IGKV1D-17A0A075B6S4 117 aa8.96□□□□□ -0.97
TRAPPC3-205ENST00000462715 NDUFB3O43676 98 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 590.4 ms