RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 C1QBP02746 253 aa11.23□□□□□ -0.61
ERCC3-206ENST00000462306 TCRAP04437 139 aa11.23□□□□□ -0.61
ERCC3-206ENST00000462306 TVP23CQ96ET8 276 aa11.23□□□□□ -0.61
ERCC3-206ENST00000462306 MAP1LC3BQ9GZQ8 125 aa11.23□□□□□ -0.61
ERCC3-206ENST00000462306 NOP10Q9NPE3 64 aaKnown RBP11.23□□□□□ -0.61
ERCC3-206ENST00000462306 HYDINQ4G0P3 5121 aa11.23□□□□□ -0.61
ERCC3-206ENST00000462306 SERTM2A0A1B0GWG4 89 aa11.22□□□□□ -0.61
ERCC3-206ENST00000462306 LY6G6CO95867 125 aa11.22□□□□□ -0.61
ERCC3-206ENST00000462306 DEFB130BP0DP73 79 aa11.22□□□□□ -0.61
ERCC3-206ENST00000462306 DEFB130AP0DP74 79 aa11.22□□□□□ -0.61
ERCC3-206ENST00000462306 EIF5AP63241 154 aaKnown RBP11.22□□□□□ -0.61
ERCC3-206ENST00000462306 ANXA2RQ3ZCQ2 193 aa11.22□□□□□ -0.61
ERCC3-206ENST00000462306 EIF4E3Q8N5X7 224 aaKnown RBP11.22□□□□□ -0.61
ERCC3-206ENST00000462306 C11orf72Q8NBR9 251 aa11.22□□□□□ -0.61
ERCC3-206ENST00000462306 EPDR1Q9UM22 224 aa11.22□□□□□ -0.61
ERCC3-206ENST00000462306 UMAD1C9J7I0 102 aa11.21□□□□□ -0.61
ERCC3-206ENST00000462306 Q6AWC8 147 aa11.21□□□□□ -0.61
ERCC3-206ENST00000462306 LGALS9CQ6DKI2 356 aa11.21□□□□□ -0.61
ERCC3-206ENST00000462306 AKAP14Q86UN6 197 aa11.21□□□□□ -0.61
ERCC3-206ENST00000462306 LINC00612Q8N6U2 182 aa11.21□□□□□ -0.61
ERCC3-206ENST00000462306 STOML3Q8TAV4 291 aa11.21□□□□□ -0.61
ERCC3-206ENST00000462306 IGHV1OR15-1A0A075B7D0 117 aa11.2□□□□□ -0.62
ERCC3-206ENST00000462306 FAM74A7A6NL05 159 aa11.2□□□□□ -0.62
ERCC3-206ENST00000462306 RGS13O14921 159 aa11.2□□□□□ -0.62
ERCC3-206ENST00000462306 IGLV2-11P01706 119 aa11.2□□□□□ -0.62
ERCC3-206ENST00000462306 TPT1P13693 172 aaKnown RBP11.2□□□□□ -0.62
ERCC3-206ENST00000462306 HTN3P15516 51 aa11.2□□□□□ -0.62
ERCC3-206ENST00000462306 UBE2G2P60604 165 aa11.2□□□□□ -0.62
ERCC3-206ENST00000462306 DAZ2Q13117 558 aaKnown RBP11.2□□□□□ -0.62
ERCC3-206ENST00000462306 ZNF680Q8NEM1 530 aa11.2□□□□□ -0.62
ERCC3-206ENST00000462306 MBD3L1Q8WWY6 194 aa11.2□□□□□ -0.62
ERCC3-206ENST00000462306 FAM210BQ96KR6 192 aa11.2□□□□□ -0.62
ERCC3-206ENST00000462306 SGK494Q96LW2 274 aa11.2□□□□□ -0.62
ERCC3-206ENST00000462306 GSN-AS1Q9NRJ2 163 aa11.2□□□□□ -0.62
ERCC3-206ENST00000462306 TP53TG3Q9ULZ0 132 aa11.2□□□□□ -0.62
ERCC3-206ENST00000462306 CBY3A6NI87 242 aa11.19□□□□□ -0.62
ERCC3-206ENST00000462306 SNURFLB1AK76 121 aa11.19□□□□□ -0.62
ERCC3-206ENST00000462306 DPPA3Q6W0C5 159 aa11.19□□□□□ -0.62
ERCC3-206ENST00000462306 CYB561D1Q8N8Q1 229 aa11.19□□□□□ -0.62
ERCC3-206ENST00000462306 FAM213BQ8TBF2 198 aa11.19□□□□□ -0.62
ERCC3-206ENST00000462306 TREM1Q9NP99 234 aa11.19□□□□□ -0.62
ERCC3-206ENST00000462306 A0A1B0GVG6 124 aa11.18□□□□□ -0.62
ERCC3-206ENST00000462306 K7EQM0 130 aa11.18□□□□□ -0.62
ERCC3-206ENST00000462306 ATG101Q9BSB4 218 aa11.18□□□□□ -0.62
ERCC3-206ENST00000462306 NDUFAF3Q9BU61 184 aa11.18□□□□□ -0.62
ERCC3-206ENST00000462306 NKX6-2Q9C056 277 aaPredicted RBP11.18□□□□□ -0.62
ERCC3-206ENST00000462306 PSG8Q9UQ74 426 aa11.18□□□□□ -0.62
ERCC3-206ENST00000462306 F6UZH7 168 aa11.17□□□□□ -0.62
ERCC3-206ENST00000462306 ATP5G1P05496 136 aa11.17□□□□□ -0.62
ERCC3-206ENST00000462306 ATP5G3P48201 142 aa11.17□□□□□ -0.62
ERCC3-206ENST00000462306 TCL1AP56279 114 aa11.17□□□□□ -0.62
ERCC3-206ENST00000462306 FLI1Q01543 452 aaPredicted RBP11.17□□□□□ -0.62
ERCC3-206ENST00000462306 MUC21Q5SSG8 566 aa11.17□□□□□ -0.62
ERCC3-206ENST00000462306 IBA57Q5T440 356 aaKnown RBP11.17□□□□□ -0.62
ERCC3-206ENST00000462306 TMEM75Q8N9X5 138 aa11.17□□□□□ -0.62
ERCC3-206ENST00000462306 SFT2D1Q8WV19 159 aa11.17□□□□□ -0.62
ERCC3-206ENST00000462306 LINC00479Q96M42 142 aa11.17□□□□□ -0.62
ERCC3-206ENST00000462306 KLF12Q9Y4X4 402 aa11.17□□□□□ -0.62
ERCC3-206ENST00000462306 GAGE12BA1L429 117 aa11.16□□□□□ -0.62
ERCC3-206ENST00000462306 FBLL1A6NHQ2 334 aaKnown RBP11.16□□□□□ -0.62
ERCC3-206ENST00000462306 GAGE7O76087 117 aa11.16□□□□□ -0.62
ERCC3-206ENST00000462306 IFNA7P01567 189 aa11.16□□□□□ -0.62
ERCC3-206ENST00000462306 GAGE12FP0CL80 117 aa11.16□□□□□ -0.62
ERCC3-206ENST00000462306 GAGE12GP0CL81 117 aa11.16□□□□□ -0.62
ERCC3-206ENST00000462306 GAGE12IP0CL82 117 aa11.16□□□□□ -0.62
ERCC3-206ENST00000462306 TDRG1Q3Y452 100 aa11.16□□□□□ -0.62
ERCC3-206ENST00000462306 TMEM88Q6PEY1 159 aa11.16□□□□□ -0.62
ERCC3-206ENST00000462306 Q6ZTI0 123 aa11.16□□□□□ -0.62
ERCC3-206ENST00000462306 C8orf49Q96NF6 230 aa11.16□□□□□ -0.62
ERCC3-206ENST00000462306 NDFIP1Q9BT67 221 aa11.16□□□□□ -0.62
ERCC3-206ENST00000462306 VPS13DQ5THJ4 4388 aa11.16□□□□□ -0.62
ERCC3-206ENST00000462306 TRAV34A0A0B4J273 112 aa11.15□□□□□ -0.62
ERCC3-206ENST00000462306 TRAV21A0A0B4J279 112 aa11.15□□□□□ -0.62
ERCC3-206ENST00000462306 F5H768 121 aa11.15□□□□□ -0.62
ERCC3-206ENST00000462306 PEX7O00628 323 aa11.15□□□□□ -0.62
ERCC3-206ENST00000462306 SPINK4O60575 86 aa11.15□□□□□ -0.62
ERCC3-206ENST00000462306 H2AFB1P0C5Y9 115 aa11.15□□□□□ -0.62
ERCC3-206ENST00000462306 FAM159AQ6UWV7 190 aa11.15□□□□□ -0.62
ERCC3-206ENST00000462306 PRNTQ86SH4 94 aa11.15□□□□□ -0.62
ERCC3-206ENST00000462306 C9orf62Q8N4C0 152 aa11.15□□□□□ -0.62
ERCC3-206ENST00000462306 HIST1H2BAQ96A08 127 aa11.15□□□□□ -0.62
ERCC3-206ENST00000462306 ARL2-SNX15V9GYD0 113 aa11.15□□□□□ -0.62
ERCC3-206ENST00000462306 A0A1B0GV50 99 aa11.14□□□□□ -0.63
ERCC3-206ENST00000462306 ZNF80P51504 273 aaPredicted RBP11.14□□□□□ -0.63
ERCC3-206ENST00000462306 SLC51BQ86UW2 128 aa11.14□□□□□ -0.63
ERCC3-206ENST00000462306 MDFICQ9P1T7 246 aa11.14□□□□□ -0.63
ERCC3-206ENST00000462306 PAGE4O60829 102 aa11.13□□□□□ -0.63
ERCC3-206ENST00000462306 RAB5CP51148 216 aa11.13□□□□□ -0.63
ERCC3-206ENST00000462306 ZNF415Q09FC8 603 aa11.13□□□□□ -0.63
ERCC3-206ENST00000462306 TMEM183BQ1AE95 376 aa11.13□□□□□ -0.63
ERCC3-206ENST00000462306 SAPCD1Q5SSQ6 148 aa11.13□□□□□ -0.63
ERCC3-206ENST00000462306 CST9LP1Q5W188 147 aa11.13□□□□□ -0.63
ERCC3-206ENST00000462306 EIF5AL1Q6IS14 154 aaKnown RBP11.13□□□□□ -0.63
ERCC3-206ENST00000462306 TMEM183AQ8IXX5 376 aa11.13□□□□□ -0.63
ERCC3-206ENST00000462306 C18orf15Q96N68 181 aa11.13□□□□□ -0.63
ERCC3-206ENST00000462306 TRGV11A0A075B6L2 103 aa11.12□□□□□ -0.63
ERCC3-206ENST00000462306 TRGV1A0A0A0MS02 117 aa11.12□□□□□ -0.63
ERCC3-206ENST00000462306 GNRH2O43555 120 aa11.12□□□□□ -0.63
ERCC3-206ENST00000462306 GCGP01275 180 aa11.12□□□□□ -0.63
ERCC3-206ENST00000462306 SULT1A2P50226 295 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms