RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 GOLT1BQ9Y3E0 138 aa7.42□□□□□ -1.22
UPF2-204ENST00000460569 TRAV12-3A0A0B4J271 114 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 RAB19A4D1S5 217 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 SPRY2O43597 315 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 NDUFS6O75380 124 aaKnown RBP7.41□□□□□ -1.22
UPF2-204ENST00000460569 LTAP01374 205 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 RBMY1A1P0DJD3 496 aaKnown RBP7.41□□□□□ -1.22
UPF2-204ENST00000460569 RBMY1CP0DJD4 496 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 TAS2R60P59551 318 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 RBMY1FQ15415 496 aaKnown RBP7.41□□□□□ -1.22
UPF2-204ENST00000460569 SMUG1Q53HV7 270 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 CENPWQ5EE01 88 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 COMMD7Q86VX2 200 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 NHLRC2Q8NBF2 726 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 CSNK1G2-AS1Q8NCQ2 148 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 RNF183Q96D59 192 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 SPATA25Q9BR10 227 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 TM2D3Q9BRN9 247 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 NIPSNAP3BQ9BS92 247 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 SMDT1Q9H4I9 107 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 ZFP30Q9Y2G7 519 aa7.41□□□□□ -1.22
UPF2-204ENST00000460569 C9JQL5 133 aa7.4□□□□□ -1.22
UPF2-204ENST00000460569 GCGP01275 180 aa7.4□□□□□ -1.22
UPF2-204ENST00000460569 GNG4P50150 75 aa7.4□□□□□ -1.22
UPF2-204ENST00000460569 BAGE2Q86Y30 109 aa7.4□□□□□ -1.22
UPF2-204ENST00000460569 C1orf158Q8N1D5 194 aa7.4□□□□□ -1.22
UPF2-204ENST00000460569 ZC2HC1AQ96GY0 325 aa7.4□□□□□ -1.22
UPF2-204ENST00000460569 SMIM7Q9BQ49 75 aa7.4□□□□□ -1.22
UPF2-204ENST00000460569 C20orf144Q9BQM9 153 aa7.4□□□□□ -1.22
UPF2-204ENST00000460569 ZMAT4Q9H898 229 aa7.4□□□□□ -1.22
UPF2-204ENST00000460569 TP53TG1Q9Y2A0 90 aa7.4□□□□□ -1.22
UPF2-204ENST00000460569 TRBV20OR9-2A0A075B6H5 130 aa7.39□□□□□ -1.23
UPF2-204ENST00000460569 PGPEP1LA6NFU8 196 aa7.39□□□□□ -1.23
UPF2-204ENST00000460569 Q6AWC8 147 aa7.39□□□□□ -1.23
UPF2-204ENST00000460569 TMEM183AQ8IXX5 376 aa7.39□□□□□ -1.23
UPF2-204ENST00000460569 TMEM256Q8N2U0 113 aa7.39□□□□□ -1.23
UPF2-204ENST00000460569 OR11H2Q8NH07 326 aa7.39□□□□□ -1.23
UPF2-204ENST00000460569 LINC01587Q99440 93 aa7.39□□□□□ -1.23
UPF2-204ENST00000460569 OVOL2Q9BRP0 275 aa7.39□□□□□ -1.23
UPF2-204ENST00000460569 TRAV21A0A0B4J279 112 aa7.38□□□□□ -1.23
UPF2-204ENST00000460569 LINC00862A6NCI5 91 aa7.38□□□□□ -1.23
UPF2-204ENST00000460569 ZNF727A8MUV8 499 aa7.38□□□□□ -1.23
UPF2-204ENST00000460569 C9JCJ5 164 aa7.38□□□□□ -1.23
UPF2-204ENST00000460569 H7BYZ3 331 aa7.38□□□□□ -1.23
UPF2-204ENST00000460569 MGST1P10620 155 aaKnown RBP7.38□□□□□ -1.23
UPF2-204ENST00000460569 HTN1P15515 57 aa7.38□□□□□ -1.23
UPF2-204ENST00000460569 ZNF80P51504 273 aaPredicted RBP7.38□□□□□ -1.23
UPF2-204ENST00000460569 PRR27Q6MZM9 219 aa7.38□□□□□ -1.23
UPF2-204ENST00000460569 ZNF705AQ6ZN79 300 aaPredicted RBP7.38□□□□□ -1.23
UPF2-204ENST00000460569 Q6ZQT7 251 aa7.38□□□□□ -1.23
UPF2-204ENST00000460569 NAGKQ9UJ70 344 aa7.38□□□□□ -1.23
UPF2-204ENST00000460569 ZNF705GA8MUZ8 300 aaPredicted RBP7.37□□□□□ -1.23
UPF2-204ENST00000460569 SH2D1AO60880 128 aa7.37□□□□□ -1.23
UPF2-204ENST00000460569 ZNF324O75467 553 aaPredicted RBP7.37□□□□□ -1.23
UPF2-204ENST00000460569 PFN1P07737 140 aaKnown RBP7.37□□□□□ -1.23
UPF2-204ENST00000460569 SFTA3P0C7M3 94 aa7.37□□□□□ -1.23
UPF2-204ENST00000460569 NHLRC4P0CG21 123 aaPredicted RBP7.37□□□□□ -1.23
UPF2-204ENST00000460569 RRN3P1Q2M238 152 aa7.37□□□□□ -1.23
UPF2-204ENST00000460569 SOHLH1Q5JUK2 328 aa7.37□□□□□ -1.23
UPF2-204ENST00000460569 MUC21Q5SSG8 566 aa7.37□□□□□ -1.23
UPF2-204ENST00000460569 FAM162BQ5T6X4 162 aa7.37□□□□□ -1.23
UPF2-204ENST00000460569 UQCC3Q6UW78 93 aa7.37□□□□□ -1.23
UPF2-204ENST00000460569 COX8CQ7Z4L0 72 aa7.37□□□□□ -1.23
UPF2-204ENST00000460569 SMIM12Q96EX1 92 aa7.37□□□□□ -1.23
UPF2-204ENST00000460569 PYGO2Q9BRQ0 406 aa7.37□□□□□ -1.23
UPF2-204ENST00000460569 MLST8Q9BVC4 326 aa7.37□□□□□ -1.23
UPF2-204ENST00000460569 X6R8D5 127 aa7.37□□□□□ -1.23
UPF2-204ENST00000460569 IGHV1OR15-1A0A075B7D0 117 aa7.36□□□□□ -1.23
UPF2-204ENST00000460569 CBY3A6NI87 242 aa7.36□□□□□ -1.23
UPF2-204ENST00000460569 FABP5P3A8MUU1 101 aa7.36□□□□□ -1.23
UPF2-204ENST00000460569 IGLV2-8P01709 118 aa7.36□□□□□ -1.23
UPF2-204ENST00000460569 PRM2P04554 102 aa7.36□□□□□ -1.23
UPF2-204ENST00000460569 FAM74A3Q4VXF1 159 aa7.36□□□□□ -1.23
UPF2-204ENST00000460569 FAM159AQ6UWV7 190 aa7.36□□□□□ -1.23
UPF2-204ENST00000460569 EIF4E3Q8N5X7 224 aaKnown RBP7.36□□□□□ -1.23
UPF2-204ENST00000460569 NEU1Q99519 415 aa7.36□□□□□ -1.23
UPF2-204ENST00000460569 TENM3Q9P273 2699 aa7.36□□□□□ -1.23
UPF2-204ENST00000460569 NBEAL2Q6ZNJ1 2754 aa7.36□□□□□ -1.23
UPF2-204ENST00000460569 IGHV4-28A0A0C4DH34 117 aa7.35□□□□□ -1.23
UPF2-204ENST00000460569 SMIM9A6NGZ8 99 aa7.35□□□□□ -1.23
UPF2-204ENST00000460569 M0R036 132 aa7.35□□□□□ -1.23
UPF2-204ENST00000460569 MIFP14174 115 aa7.35□□□□□ -1.23
UPF2-204ENST00000460569 CRIP1P50238 77 aa7.35□□□□□ -1.23
UPF2-204ENST00000460569 ANXA2RQ3ZCQ2 193 aa7.35□□□□□ -1.23
UPF2-204ENST00000460569 OCC1Q8TAD7 63 aa7.35□□□□□ -1.23
UPF2-204ENST00000460569 BIN3Q9NQY0 253 aa7.35□□□□□ -1.23
UPF2-204ENST00000460569 C11orf21Q9P2W6 132 aa7.35□□□□□ -1.23
UPF2-204ENST00000460569 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
UPF2-204ENST00000460569 K7EN84 100 aa7.34□□□□□ -1.23
UPF2-204ENST00000460569 DEFB4AO15263 64 aa7.34□□□□□ -1.23
UPF2-204ENST00000460569 ORM1P02763 201 aa7.34□□□□□ -1.23
UPF2-204ENST00000460569 AZU1P20160 251 aa7.34□□□□□ -1.23
UPF2-204ENST00000460569 OR5I1Q13606 314 aa7.34□□□□□ -1.23
UPF2-204ENST00000460569 TMEM241Q24JQ0 296 aa7.34□□□□□ -1.23
UPF2-204ENST00000460569 LINC01551Q86U37 167 aa7.34□□□□□ -1.23
UPF2-204ENST00000460569 Q8NAQ8 132 aa7.34□□□□□ -1.23
UPF2-204ENST00000460569 TMEM263Q8WUH6 116 aaKnown RBP7.34□□□□□ -1.23
UPF2-204ENST00000460569 DAZAP1Q96EP5 407 aaKnown RBP7.34□□□□□ -1.23
UPF2-204ENST00000460569 C16orf74Q96GX8 76 aa7.34□□□□□ -1.23
UPF2-204ENST00000460569 KCNS1Q96KK3 526 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms