RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 TRGV2A0A075B6R0 118 aa12.33□□□□□ -0.44
SCARNA2-201ENST00000458748 RNF222A6NCQ9 220 aa12.33□□□□□ -0.44
SCARNA2-201ENST00000458748 NUDT3O95989 172 aa12.33□□□□□ -0.44
SCARNA2-201ENST00000458748 OR5I1Q13606 314 aa12.33□□□□□ -0.44
SCARNA2-201ENST00000458748 RPL7L1Q6DKI1 246 aaKnown RBP12.33□□□□□ -0.44
SCARNA2-201ENST00000458748 GSN-AS1Q9NRJ2 163 aa12.33□□□□□ -0.44
SCARNA2-201ENST00000458748 DNAH10Q8IVF4 4471 aa12.32□□□□□ -0.44
SCARNA2-201ENST00000458748 ARPC5O15511 151 aa12.32□□□□□ -0.44
SCARNA2-201ENST00000458748 EIF3GO75821 320 aaKnown RBP eCLIP12.32□□□□□ -0.44not detected■■□□□ 11.5
SCARNA2-201ENST00000458748 GCHFRP30047 84 aa12.32□□□□□ -0.44
SCARNA2-201ENST00000458748 TCL1AP56279 114 aa12.32□□□□□ -0.44
SCARNA2-201ENST00000458748 ZNF415Q09FC8 603 aa12.32□□□□□ -0.44
SCARNA2-201ENST00000458748 FAM159AQ6UWV7 190 aa12.32□□□□□ -0.44
SCARNA2-201ENST00000458748 GOLT1AQ6ZVE7 132 aa12.32□□□□□ -0.44
SCARNA2-201ENST00000458748 NDFIP1Q9BT67 221 aa12.32□□□□□ -0.44
SCARNA2-201ENST00000458748 SH3BGRL3Q9H299 93 aa12.32□□□□□ -0.44
SCARNA2-201ENST00000458748 TRGV1A0A0A0MS02 117 aa12.31□□□□□ -0.44
SCARNA2-201ENST00000458748 CCL18P55774 89 aa12.31□□□□□ -0.44
SCARNA2-201ENST00000458748 LGALS9BQ3B8N2 356 aa12.31□□□□□ -0.44
SCARNA2-201ENST00000458748 AKR1C8PQ5T2L2 129 aa12.31□□□□□ -0.44
SCARNA2-201ENST00000458748 Q6AWC8 147 aa12.31□□□□□ -0.44
SCARNA2-201ENST00000458748 C5orf17Q8NAS9 161 aa12.31□□□□□ -0.44
SCARNA2-201ENST00000458748 C11orf72Q8NBR9 251 aa12.31□□□□□ -0.44
SCARNA2-201ENST00000458748 C18orf15Q96N68 181 aa12.31□□□□□ -0.44
SCARNA2-201ENST00000458748 TRGV11A0A075B6L2 103 aa12.3□□□□□ -0.44
SCARNA2-201ENST00000458748 PRR9Q5T870 116 aa12.3□□□□□ -0.44
SCARNA2-201ENST00000458748 Q6ZTI0 123 aa12.3□□□□□ -0.44
SCARNA2-201ENST00000458748 IQCF2Q8IXL9 164 aa12.3□□□□□ -0.44
SCARNA2-201ENST00000458748 SUN5Q8TC36 379 aa12.3□□□□□ -0.44
SCARNA2-201ENST00000458748 TRAV26-1A0A087WT03 109 aa12.29□□□□□ -0.44
SCARNA2-201ENST00000458748 CTXND1A0A1B0GTU2 59 aa12.29□□□□□ -0.44
SCARNA2-201ENST00000458748 FBLL1A6NHQ2 334 aaKnown RBP12.29□□□□□ -0.44
SCARNA2-201ENST00000458748 H3BNG1 76 aa12.29□□□□□ -0.44
SCARNA2-201ENST00000458748 SPINK4O60575 86 aa12.29□□□□□ -0.44
SCARNA2-201ENST00000458748 LINC00336Q6ZUF6 198 aa12.29□□□□□ -0.44
SCARNA2-201ENST00000458748 TREM1Q9NP99 234 aa12.29□□□□□ -0.44
SCARNA2-201ENST00000458748 KLF12Q9Y4X4 402 aa12.29□□□□□ -0.44
SCARNA2-201ENST00000458748 TRAV21A0A0B4J279 112 aa12.28□□□□□ -0.44
SCARNA2-201ENST00000458748 ZNF345Q14585 488 aa12.28□□□□□ -0.44
SCARNA2-201ENST00000458748 NKX6-2Q9C056 277 aaPredicted RBP12.28□□□□□ -0.44
SCARNA2-201ENST00000458748 TMPRSS5Q9H3S3 457 aa12.28□□□□□ -0.44
SCARNA2-201ENST00000458748 DNAH6Q9C0G6 4158 aa12.28□□□□□ -0.44
SCARNA2-201ENST00000458748 G3V3Q6 166 aa12.27□□□□□ -0.45
SCARNA2-201ENST00000458748 TCRAP04437 139 aa12.27□□□□□ -0.45
SCARNA2-201ENST00000458748 ZFP69Q49AA0 526 aa12.27□□□□□ -0.45
SCARNA2-201ENST00000458748 SOHLH1Q5JUK2 328 aa12.27□□□□□ -0.45
SCARNA2-201ENST00000458748 MUC21Q5SSG8 566 aa12.27□□□□□ -0.45
SCARNA2-201ENST00000458748 KCNS1Q96KK3 526 aa12.27□□□□□ -0.45
SCARNA2-201ENST00000458748 SPXQ9BT56 116 aa12.27□□□□□ -0.45
SCARNA2-201ENST00000458748 KRTAP17-1Q9BYP8 105 aa12.27□□□□□ -0.45
SCARNA2-201ENST00000458748 TP53TG3Q9ULZ0 132 aa12.27□□□□□ -0.45
SCARNA2-201ENST00000458748 A0A1W2PRE2 83 aa12.26□□□□□ -0.45
SCARNA2-201ENST00000458748 M0R2N4 97 aa12.26□□□□□ -0.45
SCARNA2-201ENST00000458748 SUMO1P63165 101 aaKnown RBP12.26□□□□□ -0.45
SCARNA2-201ENST00000458748 GNG5P63218 68 aa12.26□□□□□ -0.45
SCARNA2-201ENST00000458748 SLAQ13239 276 aa12.26□□□□□ -0.45
SCARNA2-201ENST00000458748 CYB561D1Q8N8Q1 229 aa12.26□□□□□ -0.45
SCARNA2-201ENST00000458748 NAGKQ9UJ70 344 aa12.26□□□□□ -0.45
SCARNA2-201ENST00000458748 TRAV8-1A0A0A6YYK1 113 aa12.25□□□□□ -0.45
SCARNA2-201ENST00000458748 A0A0J9YY99 117 aa12.25□□□□□ -0.45
SCARNA2-201ENST00000458748 HMSDA8MTL9 139 aa12.25□□□□□ -0.45
SCARNA2-201ENST00000458748 HOXA5P20719 270 aa12.25□□□□□ -0.45
SCARNA2-201ENST00000458748 PPT1P50897 306 aa12.25□□□□□ -0.45
SCARNA2-201ENST00000458748 TMEM183BQ1AE95 376 aa12.25□□□□□ -0.45
SCARNA2-201ENST00000458748 TDRG1Q3Y452 100 aa12.25□□□□□ -0.45
SCARNA2-201ENST00000458748 TMEM183AQ8IXX5 376 aa12.25□□□□□ -0.45
SCARNA2-201ENST00000458748 STOML3Q8TAV4 291 aa12.25□□□□□ -0.45
SCARNA2-201ENST00000458748 EPDR1Q9UM22 224 aa12.25□□□□□ -0.45
SCARNA2-201ENST00000458748 NACAE9PAV3 2078 aa12.25□□□□□ -0.45
SCARNA2-201ENST00000458748 IGLV2-18A0A075B6J9 118 aa12.24□□□□□ -0.45
SCARNA2-201ENST00000458748 A0A0D9SG52 128 aa12.24□□□□□ -0.45
SCARNA2-201ENST00000458748 KANTRA0A1W2PQU2 76 aa12.24□□□□□ -0.45
SCARNA2-201ENST00000458748 EIF5AP63241 154 aaKnown RBP12.24□□□□□ -0.45
SCARNA2-201ENST00000458748 SAPCD1Q5SSQ6 148 aa12.24□□□□□ -0.45
SCARNA2-201ENST00000458748 KCNRGQ8N5I3 272 aa12.24□□□□□ -0.45
SCARNA2-201ENST00000458748 TMEM75Q8N9X5 138 aa12.24□□□□□ -0.45
SCARNA2-201ENST00000458748 SDF2L1Q9HCN8 221 aa12.24□□□□□ -0.45
SCARNA2-201ENST00000458748 SMLR1H3BR10 107 aa12.23□□□□□ -0.45
SCARNA2-201ENST00000458748 IFNA7P01567 189 aa12.23□□□□□ -0.45
SCARNA2-201ENST00000458748 FLI1Q01543 452 aaPredicted RBP12.23□□□□□ -0.45
SCARNA2-201ENST00000458748 Q6ZQT7 251 aa12.23□□□□□ -0.45
SCARNA2-201ENST00000458748 SSX7Q7RTT5 188 aa12.23□□□□□ -0.45
SCARNA2-201ENST00000458748 MRPL16Q9NX20 251 aaKnown RBP12.23□□□□□ -0.45
SCARNA2-201ENST00000458748 PSG8Q9UQ74 426 aa12.23□□□□□ -0.45
SCARNA2-201ENST00000458748 MAP1LC3B2A6NCE7 125 aa12.22□□□□□ -0.45
SCARNA2-201ENST00000458748 GGTLC3B5MD39 225 aa12.22□□□□□ -0.45
SCARNA2-201ENST00000458748 F6UZH7 168 aa12.22□□□□□ -0.45
SCARNA2-201ENST00000458748 Q6ZR54 194 aa12.22□□□□□ -0.45
SCARNA2-201ENST00000458748 MAP1LC3BQ9GZQ8 125 aa12.22□□□□□ -0.45
SCARNA2-201ENST00000458748 CYTL1Q9NRR1 136 aa12.22□□□□□ -0.45
SCARNA2-201ENST00000458748 UMAD1C9J7I0 102 aa12.21□□□□□ -0.45
SCARNA2-201ENST00000458748 ZNF726P1Q15940 193 aa12.21□□□□□ -0.45
SCARNA2-201ENST00000458748 SMUG1Q53HV7 270 aa12.21□□□□□ -0.45
SCARNA2-201ENST00000458748 PRNTQ86SH4 94 aa12.21□□□□□ -0.45
SCARNA2-201ENST00000458748 RASL10AQ92737 203 aa12.21□□□□□ -0.45
SCARNA2-201ENST00000458748 HIST1H2BAQ96A08 127 aa12.21□□□□□ -0.45
SCARNA2-201ENST00000458748 TVP23CQ96ET8 276 aa12.21□□□□□ -0.45
SCARNA2-201ENST00000458748 SGK494Q96LW2 274 aa12.21□□□□□ -0.45
SCARNA2-201ENST00000458748 MDFICQ9P1T7 246 aa12.21□□□□□ -0.45
SCARNA2-201ENST00000458748 PRO0255Q9UI72 69 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms