RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 AHCTF1Q8WYP5 2266 aa14.46□□□□□ -0.1
PTPA-223ENST00000452489 IGHV3-72A0A0B4J1Y9 119 aa14.45□□□□□ -0.1
PTPA-223ENST00000452489 TRAV8-4A0A0B4J246 113 aa14.45□□□□□ -0.1
PTPA-223ENST00000452489 MRPS12O15235 138 aaKnown RBP14.45□□□□□ -0.1
PTPA-223ENST00000452489 IGKV1-17P01599 117 aa14.45□□□□□ -0.1
PTPA-223ENST00000452489 IGHG4P01861 327 aa14.45□□□□□ -0.1
PTPA-223ENST00000452489 COX6B1P14854 86 aa14.45□□□□□ -0.1
PTPA-223ENST00000452489 FAM57AQ8TBR7 257 aa14.45□□□□□ -0.1
PTPA-223ENST00000452489 TRAV12-1A0A0B4J245 112 aa14.45□□□□□ -0.1
PTPA-223ENST00000452489 NRACQ8N912 160 aa14.45□□□□□ -0.1
PTPA-223ENST00000452489 TMEM126AQ9H061 195 aa14.45□□□□□ -0.1
PTPA-223ENST00000452489 LOC107984640A0A0U1RRK4 108 aa14.44□□□□□ -0.1
PTPA-223ENST00000452489 LINC00694P0DN24 101 aa14.44□□□□□ -0.1
PTPA-223ENST00000452489 CCL3L1P16619 93 aa14.44□□□□□ -0.1
PTPA-223ENST00000452489 MZT1Q08AG7 82 aa14.44□□□□□ -0.1
PTPA-223ENST00000452489 PSMG3-AS1Q96PY0 264 aa14.44□□□□□ -0.1
PTPA-223ENST00000452489 CNFNQ9BYD5 112 aa14.44□□□□□ -0.1
PTPA-223ENST00000452489 LINC00574Q9H8X3 128 aa14.44□□□□□ -0.1
PTPA-223ENST00000452489 CEACAM4O75871 244 aa14.44□□□□□ -0.1
PTPA-223ENST00000452489 VMA21Q3ZAQ7 101 aa14.44□□□□□ -0.1
PTPA-223ENST00000452489 Q6ZS46 218 aa14.44□□□□□ -0.1
PTPA-223ENST00000452489 TDHQ8IZJ6 230 aa14.44□□□□□ -0.1
PTPA-223ENST00000452489 RAI1Q7Z5J4 1906 aaPredicted RBP14.43□□□□□ -0.1
PTPA-223ENST00000452489 ENSAO43768 121 aaKnown RBP14.43□□□□□ -0.1
PTPA-223ENST00000452489 CD40P25942 277 aa14.43□□□□□ -0.1
PTPA-223ENST00000452489 CXCL12P48061 93 aa14.43□□□□□ -0.1
PTPA-223ENST00000452489 SPANXA1Q9NS26 97 aa14.43□□□□□ -0.1
PTPA-223ENST00000452489 DMDP11532 3685 aa14.43□□□□□ -0.1
PTPA-223ENST00000452489 RPL27AP46776 148 aaKnown RBP14.43□□□□□ -0.1
PTPA-223ENST00000452489 FOXC1Q12948 553 aa14.43□□□□□ -0.1
PTPA-223ENST00000452489 IGFL4Q6B9Z1 124 aa14.43□□□□□ -0.1
PTPA-223ENST00000452489 CNTFRP26992 372 aa14.42□□□□□ -0.1
PTPA-223ENST00000452489 PLGLAQ15195 96 aa14.42□□□□□ -0.1
PTPA-223ENST00000452489 NEXN-AS1Q8NBZ9 246 aa14.42□□□□□ -0.1
PTPA-223ENST00000452489 TRAV2A0A0B4J234 112 aa14.42□□□□□ -0.1
PTPA-223ENST00000452489 A0A0J9YY99 117 aa14.42□□□□□ -0.1
PTPA-223ENST00000452489 H7C2G1 150 aa14.42□□□□□ -0.1
PTPA-223ENST00000452489 C5orf47Q569G3 176 aa14.42□□□□□ -0.1
PTPA-223ENST00000452489 SCGB3A1Q96QR1 104 aa14.42□□□□□ -0.1
PTPA-223ENST00000452489 SPRR3Q9UBC9 169 aa14.42□□□□□ -0.1
PTPA-223ENST00000452489 PRO1854Q9UHT4 67 aa14.42□□□□□ -0.1
PTPA-223ENST00000452489 SMG1Q96Q15 3661 aaKnown RBP14.42□□□□□ -0.1
PTPA-223ENST00000452489 ELANEP08246 267 aa14.41□□□□□ -0.1
PTPA-223ENST00000452489 IGFBP4P22692 258 aa14.41□□□□□ -0.1
PTPA-223ENST00000452489 CACNA1EQ15878 2313 aa14.41□□□□□ -0.1
PTPA-223ENST00000452489 IGHV3-30P01768 117 aa14.4□□□□□ -0.1
PTPA-223ENST00000452489 IGHV3-30-5P0DP03 117 aa14.4□□□□□ -0.1
PTPA-223ENST00000452489 WT1P19544 449 aaPredicted RBP14.4□□□□□ -0.1
PTPA-223ENST00000452489 COX8CQ7Z4L0 72 aa14.4□□□□□ -0.1
PTPA-223ENST00000452489 ICE1Q9Y2F5 2266 aa14.39□□□□□ -0.11
PTPA-223ENST00000452489 IGHV1-18A0A0C4DH31 117 aa14.39□□□□□ -0.11
PTPA-223ENST00000452489 ZNF491Q8N8L2 437 aa14.39□□□□□ -0.11
PTPA-223ENST00000452489 CNEP1R1Q8N9A8 125 aa14.39□□□□□ -0.11
PTPA-223ENST00000452489 CADP27708 2225 aa14.39□□□□□ -0.11
PTPA-223ENST00000452489 I3L2K1 104 aa14.39□□□□□ -0.11
PTPA-223ENST00000452489 TM4SF5O14894 197 aa14.39□□□□□ -0.11
PTPA-223ENST00000452489 Q6ZT83 130 aa14.39□□□□□ -0.11
PTPA-223ENST00000452489 RNF125Q96EQ8 232 aa14.39□□□□□ -0.11
PTPA-223ENST00000452489 KALRNO60229 2985 aa14.38□□□□□ -0.11
PTPA-223ENST00000452489 TIMM23O14925 209 aa14.38□□□□□ -0.11
PTPA-223ENST00000452489 EIF4EBP3O60516 100 aaPredicted RBP14.38□□□□□ -0.11
PTPA-223ENST00000452489 HLA-DMBP28068 263 aa14.38□□□□□ -0.11
PTPA-223ENST00000452489 GLRXP35754 106 aa14.38□□□□□ -0.11
PTPA-223ENST00000452489 S4R3C0 116 aa14.38□□□□□ -0.11
PTPA-223ENST00000452489 BAALCQ8WXS3 180 aa14.38□□□□□ -0.11
PTPA-223ENST00000452489 DNAJC30Q96LL9 226 aa14.38□□□□□ -0.11
PTPA-223ENST00000452489 RPL7P18124 248 aaKnown RBP14.37□□□□□ -0.11
PTPA-223ENST00000452489 SAP25Q8TEE9 199 aa14.37□□□□□ -0.11
PTPA-223ENST00000452489 DUSP14O95147 198 aaKnown RBP14.37□□□□□ -0.11
PTPA-223ENST00000452489 IGHV4-39P01824 125 aa14.37□□□□□ -0.11
PTPA-223ENST00000452489 EMP1P54849 157 aa14.37□□□□□ -0.11
PTPA-223ENST00000452489 MRPL23Q16540 153 aaKnown RBP14.37□□□□□ -0.11
PTPA-223ENST00000452489 ZNF56Q15929 161 aa14.36□□□□□ -0.11
PTPA-223ENST00000452489 TMEM190Q8WZ59 177 aa14.36□□□□□ -0.11
PTPA-223ENST00000452489 ZGRF1Q86YA3 2104 aa14.36□□□□□ -0.11
PTPA-223ENST00000452489 OOSP1A8MZH6 123 aa14.36□□□□□ -0.11
PTPA-223ENST00000452489 TEX22C9J3V5 150 aa14.36□□□□□ -0.11
PTPA-223ENST00000452489 RNF7Q9UBF6 113 aa14.36□□□□□ -0.11
PTPA-223ENST00000452489 LGALS9O00182 355 aa14.35□□□□□ -0.11
PTPA-223ENST00000452489 TMEM30BQ3MIR4 351 aa14.35□□□□□ -0.11
PTPA-223ENST00000452489 LINC01620Q4KN68 170 aa14.35□□□□□ -0.11
PTPA-223ENST00000452489 CFHR4Q92496 578 aa14.35□□□□□ -0.11
PTPA-223ENST00000452489 RPL13AP40429 203 aaKnown RBP14.35□□□□□ -0.11
PTPA-223ENST00000452489 TCF15Q12870 199 aa14.35□□□□□ -0.11
PTPA-223ENST00000452489 TOMM6Q96B49 74 aa14.35□□□□□ -0.11
PTPA-223ENST00000452489 SPXQ9BT56 116 aa14.35□□□□□ -0.11
PTPA-223ENST00000452489 SPENQ96T58 3664 aaKnown RBP14.34□□□□□ -0.11
PTPA-223ENST00000452489 ZZEF1O43149 2961 aa14.34□□□□□ -0.11
PTPA-223ENST00000452489 SMIM9A6NGZ8 99 aa14.34□□□□□ -0.11
PTPA-223ENST00000452489 TSPEAR-AS2P59090 65 aa14.34□□□□□ -0.11
PTPA-223ENST00000452489 ERCC8Q13216 396 aa14.34□□□□□ -0.11
PTPA-223ENST00000452489 PDE6HQ13956 83 aa14.34□□□□□ -0.11
PTPA-223ENST00000452489 IL17RELQ6ZVW7 336 aa14.34□□□□□ -0.11
PTPA-223ENST00000452489 SMIM2Q9BVW6 85 aa14.34□□□□□ -0.11
PTPA-223ENST00000452489 H3BMM0 161 aa14.34□□□□□ -0.11
PTPA-223ENST00000452489 PF4V1P10720 104 aa14.34□□□□□ -0.11
PTPA-223ENST00000452489 UBE2WQ96B02 151 aa14.34□□□□□ -0.11
PTPA-223ENST00000452489 IGHV3-33P01772 117 aa14.33□□□□□ -0.12
PTPA-223ENST00000452489 TRGV5A0A0B4J1U4 118 aa14.33□□□□□ -0.12
PTPA-223ENST00000452489 A4D1N5 150 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms