RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 GOLT1AQ6ZVE7 132 aa11.3□□□□□ -0.6
SCAMP4-205ENST00000452128 EIF4E3Q8N5X7 224 aaKnown RBP11.3□□□□□ -0.6
SCAMP4-205ENST00000452128 C18orf15Q96N68 181 aa11.3□□□□□ -0.6
SCAMP4-205ENST00000452128 GSN-AS1Q9NRJ2 163 aa11.3□□□□□ -0.6
SCAMP4-205ENST00000452128 IGHV1OR15-1A0A075B7D0 117 aa11.29□□□□□ -0.6
SCAMP4-205ENST00000452128 TRAV8-1A0A0A6YYK1 113 aa11.29□□□□□ -0.6
SCAMP4-205ENST00000452128 ATP5G1P05496 136 aa11.29□□□□□ -0.6
SCAMP4-205ENST00000452128 HTN3P15516 51 aa11.29□□□□□ -0.6
SCAMP4-205ENST00000452128 ATP5G3P48201 142 aa11.29□□□□□ -0.6
SCAMP4-205ENST00000452128 GNG5P63218 68 aa11.29□□□□□ -0.6
SCAMP4-205ENST00000452128 TMEM167BQ9NRX6 74 aa11.29□□□□□ -0.6
SCAMP4-205ENST00000452128 KLF12Q9Y4X4 402 aa11.29□□□□□ -0.6
SCAMP4-205ENST00000452128 CTXND1A0A1B0GTU2 59 aa11.28□□□□□ -0.6
SCAMP4-205ENST00000452128 SPINK4O60575 86 aa11.28□□□□□ -0.6
SCAMP4-205ENST00000452128 TCRAP04437 139 aa11.28□□□□□ -0.6
SCAMP4-205ENST00000452128 TCL1AP56279 114 aa11.28□□□□□ -0.6
SCAMP4-205ENST00000452128 FAM74A1Q5RGS3 127 aa11.28□□□□□ -0.6
SCAMP4-205ENST00000452128 IBA57Q5T440 356 aaKnown RBP11.28□□□□□ -0.6
SCAMP4-205ENST00000452128 Q6ZTI0 123 aa11.28□□□□□ -0.6
SCAMP4-205ENST00000452128 POM121L12Q8N7R1 296 aa11.28□□□□□ -0.6
SCAMP4-205ENST00000452128 C5orf17Q8NAS9 161 aa11.28□□□□□ -0.6
SCAMP4-205ENST00000452128 ZNF680Q8NEM1 530 aa11.28□□□□□ -0.6
SCAMP4-205ENST00000452128 CMTM2Q8TAZ6 248 aa11.28□□□□□ -0.6
SCAMP4-205ENST00000452128 TMPRSS5Q9H3S3 457 aa11.28□□□□□ -0.6
SCAMP4-205ENST00000452128 EPDR1Q9UM22 224 aa11.28□□□□□ -0.6
SCAMP4-205ENST00000452128 A0A1W2PRE2 83 aa11.27□□□□□ -0.61
SCAMP4-205ENST00000452128 P0DMU3 169 aa11.27□□□□□ -0.61
SCAMP4-205ENST00000452128 FAM231AP0DMU4 169 aa11.27□□□□□ -0.61
SCAMP4-205ENST00000452128 FAM231CP0DMU5 169 aa11.27□□□□□ -0.61
SCAMP4-205ENST00000452128 HOXA5P20719 270 aa11.27□□□□□ -0.61
SCAMP4-205ENST00000452128 SUMO1P63165 101 aaKnown RBP11.27□□□□□ -0.61
SCAMP4-205ENST00000452128 TDRG1Q3Y452 100 aa11.27□□□□□ -0.61
SCAMP4-205ENST00000452128 ARPC5LQ9BPX5 153 aa11.27□□□□□ -0.61
SCAMP4-205ENST00000452128 A0A0D9SG52 128 aa11.26□□□□□ -0.61
SCAMP4-205ENST00000452128 SERTM2A0A1B0GWG4 89 aa11.26□□□□□ -0.61
SCAMP4-205ENST00000452128 SNURFLB1AK76 121 aa11.26□□□□□ -0.61
SCAMP4-205ENST00000452128 GAGE12BA1L429 117 aa11.25□□□□□ -0.61
SCAMP4-205ENST00000452128 F5H768 121 aa11.25□□□□□ -0.61
SCAMP4-205ENST00000452128 GAGE7O76087 117 aa11.25□□□□□ -0.61
SCAMP4-205ENST00000452128 SEC11BP0C7V7 166 aa11.25□□□□□ -0.61
SCAMP4-205ENST00000452128 GAGE12FP0CL80 117 aa11.25□□□□□ -0.61
SCAMP4-205ENST00000452128 GAGE12GP0CL81 117 aa11.25□□□□□ -0.61
SCAMP4-205ENST00000452128 GAGE12IP0CL82 117 aa11.25□□□□□ -0.61
SCAMP4-205ENST00000452128 FHITP49789 147 aa11.25□□□□□ -0.61
SCAMP4-205ENST00000452128 AKR1C8PQ5T2L2 129 aa11.25□□□□□ -0.61
SCAMP4-205ENST00000452128 C15orf53Q8NAA6 179 aa11.25□□□□□ -0.61
SCAMP4-205ENST00000452128 MDFICQ9P1T7 246 aa11.25□□□□□ -0.61
SCAMP4-205ENST00000452128 FAM74A7A6NL05 159 aa11.24□□□□□ -0.61
SCAMP4-205ENST00000452128 RGS13O14921 159 aa11.24□□□□□ -0.61
SCAMP4-205ENST00000452128 BCL2L11O43521 198 aa11.24□□□□□ -0.61
SCAMP4-205ENST00000452128 ZNF80P51504 273 aaPredicted RBP11.24□□□□□ -0.61
SCAMP4-205ENST00000452128 LGALS9BQ3B8N2 356 aa11.24□□□□□ -0.61
SCAMP4-205ENST00000452128 RNF212Q495C1 297 aa11.24□□□□□ -0.61
SCAMP4-205ENST00000452128 TCTE3Q8IZS6 198 aa11.24□□□□□ -0.61
SCAMP4-205ENST00000452128 MBD3L1Q8WWY6 194 aa11.24□□□□□ -0.61
SCAMP4-205ENST00000452128 SGK494Q96LW2 274 aa11.24□□□□□ -0.61
SCAMP4-205ENST00000452128 C11orf21Q9P2W6 132 aa11.24□□□□□ -0.61
SCAMP4-205ENST00000452128 RPH3ALQ9UNE2 315 aa11.24□□□□□ -0.61
SCAMP4-205ENST00000452128 MUC4Q99102 2169 aa11.24□□□□□ -0.61
SCAMP4-205ENST00000452128 FGF8P55075 233 aaPredicted RBP11.23□□□□□ -0.61
SCAMP4-205ENST00000452128 MUC21Q5SSG8 566 aa11.23□□□□□ -0.61
SCAMP4-205ENST00000452128 TMUB2Q71RG4 321 aa11.23□□□□□ -0.61
SCAMP4-205ENST00000452128 LINC00479Q96M42 142 aa11.23□□□□□ -0.61
SCAMP4-205ENST00000452128 TREM1Q9NP99 234 aa11.23□□□□□ -0.61
SCAMP4-205ENST00000452128 PSG8Q9UQ74 426 aa11.23□□□□□ -0.61
SCAMP4-205ENST00000452128 H3BNG1 76 aa11.22□□□□□ -0.61
SCAMP4-205ENST00000452128 LGALSLQ3ZCW2 172 aaPredicted RBP11.22□□□□□ -0.61
SCAMP4-205ENST00000452128 Q6ZR54 194 aa11.22□□□□□ -0.61
SCAMP4-205ENST00000452128 CYB561D1Q8N8Q1 229 aa11.22□□□□□ -0.61
SCAMP4-205ENST00000452128 TMEM75Q8N9X5 138 aa11.22□□□□□ -0.61
SCAMP4-205ENST00000452128 VSIG2Q96IQ7 327 aa11.22□□□□□ -0.61
SCAMP4-205ENST00000452128 ATG101Q9BSB4 218 aa11.22□□□□□ -0.61
SCAMP4-205ENST00000452128 HECTD4Q9Y4D8 3996 aa11.21□□□□□ -0.61
SCAMP4-205ENST00000452128 IGHV3-16A0A0C4DH30 117 aa11.21□□□□□ -0.61
SCAMP4-205ENST00000452128 MAP1LC3B2A6NCE7 125 aa11.21□□□□□ -0.61
SCAMP4-205ENST00000452128 F6UZH7 168 aa11.21□□□□□ -0.61
SCAMP4-205ENST00000452128 GNRH2O43555 120 aa11.21□□□□□ -0.61
SCAMP4-205ENST00000452128 COX8CQ7Z4L0 72 aa11.21□□□□□ -0.61
SCAMP4-205ENST00000452128 STOML3Q8TAV4 291 aa11.21□□□□□ -0.61
SCAMP4-205ENST00000452128 RASL10AQ92737 203 aa11.21□□□□□ -0.61
SCAMP4-205ENST00000452128 C8orf49Q96NF6 230 aa11.21□□□□□ -0.61
SCAMP4-205ENST00000452128 MAP1LC3BQ9GZQ8 125 aa11.21□□□□□ -0.61
SCAMP4-205ENST00000452128 TRAV26-1A0A087WT03 109 aa11.2□□□□□ -0.62
SCAMP4-205ENST00000452128 TRGV1A0A0A0MS02 117 aa11.2□□□□□ -0.62
SCAMP4-205ENST00000452128 TRAV21A0A0B4J279 112 aa11.2□□□□□ -0.62
SCAMP4-205ENST00000452128 FBLL1A6NHQ2 334 aaKnown RBP11.2□□□□□ -0.62
SCAMP4-205ENST00000452128 UMAD1C9J7I0 102 aa11.2□□□□□ -0.62
SCAMP4-205ENST00000452128 FLI1Q01543 452 aaPredicted RBP11.2□□□□□ -0.62
SCAMP4-205ENST00000452128 ZNF575Q86XF7 245 aa11.2□□□□□ -0.62
SCAMP4-205ENST00000452128 NKX6-2Q9C056 277 aaPredicted RBP11.2□□□□□ -0.62
SCAMP4-205ENST00000452128 TRAV34A0A0B4J273 112 aa11.19□□□□□ -0.62
SCAMP4-205ENST00000452128 FAM3BP58499 235 aaPredicted RBP11.19□□□□□ -0.62
SCAMP4-205ENST00000452128 UBE2G2P60604 165 aa11.19□□□□□ -0.62
SCAMP4-205ENST00000452128 TMEM183BQ1AE95 376 aa11.19□□□□□ -0.62
SCAMP4-205ENST00000452128 FAM159AQ6UWV7 190 aa11.19□□□□□ -0.62
SCAMP4-205ENST00000452128 TMEM183AQ8IXX5 376 aa11.19□□□□□ -0.62
SCAMP4-205ENST00000452128 SPXQ9BT56 116 aa11.19□□□□□ -0.62
SCAMP4-205ENST00000452128 ZNF471Q9BX82 626 aaPredicted RBP11.19□□□□□ -0.62
SCAMP4-205ENST00000452128 MRPL16Q9NX20 251 aaKnown RBP11.19□□□□□ -0.62
SCAMP4-205ENST00000452128 NACAE9PAV3 2078 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms