RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 RBMY1DP0C7P1 496 aaKnown RBP14.2□□□□□ -0.14
RPS28-202ENST00000449223 TSPOP30536 169 aa14.2□□□□□ -0.14
RPS28-202ENST00000449223 CDKN1BP46527 198 aa14.2□□□□□ -0.14
RPS28-202ENST00000449223 CRIP1P50238 77 aa14.2□□□□□ -0.14
RPS28-202ENST00000449223 OR5I1Q13606 314 aa14.2□□□□□ -0.14
RPS28-202ENST00000449223 SFRP2Q96HF1 295 aa14.2□□□□□ -0.14
RPS28-202ENST00000449223 WFDC10AQ9H1F0 79 aa14.2□□□□□ -0.14
RPS28-202ENST00000449223 OSTCQ9NRP0 149 aa14.2□□□□□ -0.14
RPS28-202ENST00000449223 KRTAP10-11P60412 298 aa14.19□□□□□ -0.14
RPS28-202ENST00000449223 LINC00322Q6ZN03 302 aaPredicted RBP14.19□□□□□ -0.14
RPS28-202ENST00000449223 MGAM2Q2M2H8 2515 aa14.19□□□□□ -0.14
RPS28-202ENST00000449223 A0A087WWC5 75 aa14.18□□□□□ -0.14
RPS28-202ENST00000449223 PFN1P07737 140 aaKnown RBP14.18□□□□□ -0.14
RPS28-202ENST00000449223 ZNF80P51504 273 aaPredicted RBP14.18□□□□□ -0.14
RPS28-202ENST00000449223 FAM162BQ5T6X4 162 aa14.18□□□□□ -0.14
RPS28-202ENST00000449223 PRR9Q5T870 116 aa14.18□□□□□ -0.14
RPS28-202ENST00000449223 Q6AWC8 147 aa14.18□□□□□ -0.14
RPS28-202ENST00000449223 NBEAL1Q6ZS30 2694 aa14.18□□□□□ -0.14
RPS28-202ENST00000449223 C7orf77A4D0Y5 90 aa14.17□□□□□ -0.14
RPS28-202ENST00000449223 G3V4G9 280 aa14.17□□□□□ -0.14
RPS28-202ENST00000449223 IBA57Q5T440 356 aaKnown RBP14.17□□□□□ -0.14
RPS28-202ENST00000449223 PRR27Q6MZM9 219 aa14.17□□□□□ -0.14
RPS28-202ENST00000449223 DEFB125Q8N687 156 aa14.17□□□□□ -0.14
RPS28-202ENST00000449223 TMEM242Q9NWH2 141 aa14.17□□□□□ -0.14
RPS28-202ENST00000449223 IGKV3-20P01619 116 aa14.16□□□□□ -0.14
RPS28-202ENST00000449223 MT-ND4LP03901 98 aa14.16□□□□□ -0.14
RPS28-202ENST00000449223 GPX1P07203 203 aa14.16□□□□□ -0.14
RPS28-202ENST00000449223 ERVFC1-1P60608 527 aa14.16□□□□□ -0.14
RPS28-202ENST00000449223 RNF212Q495C1 297 aa14.16□□□□□ -0.14
RPS28-202ENST00000449223 ANAPC16Q96DE5 110 aa14.16□□□□□ -0.14
RPS28-202ENST00000449223 CTDSP1Q9GZU7 261 aa14.16□□□□□ -0.14
RPS28-202ENST00000449223 FABP5P3A8MUU1 101 aa14.15□□□□□ -0.14
RPS28-202ENST00000449223 PPP1R2P9O14990 202 aa14.15□□□□□ -0.14
RPS28-202ENST00000449223 AMBPP02760 352 aa14.15□□□□□ -0.14
RPS28-202ENST00000449223 NUTF2P61970 127 aaKnown RBP14.15□□□□□ -0.14
RPS28-202ENST00000449223 KPRPQ5T749 579 aaPredicted RBP14.15□□□□□ -0.14
RPS28-202ENST00000449223 ATRAIDQ6UW56 229 aa14.15□□□□□ -0.14
RPS28-202ENST00000449223 NUDT10Q8NFP7 164 aa14.15□□□□□ -0.14
RPS28-202ENST00000449223 NUDT11Q96G61 164 aa14.15□□□□□ -0.14
RPS28-202ENST00000449223 RNASE7Q9H1E1 156 aaKnown RBP14.15□□□□□ -0.14
RPS28-202ENST00000449223 M0R2Z0 102 aa14.15□□□□□ -0.14
RPS28-202ENST00000449223 CRXO43186 299 aaPredicted RBP14.15□□□□□ -0.14
RPS28-202ENST00000449223 SH2D1AO60880 128 aa14.15□□□□□ -0.14
RPS28-202ENST00000449223 SPINK13Q1W4C9 94 aa14.15□□□□□ -0.14
RPS28-202ENST00000449223 GFI1BQ5VTD9 330 aa14.15□□□□□ -0.14
RPS28-202ENST00000449223 C15orf54Q8N8G6 183 aa14.15□□□□□ -0.14
RPS28-202ENST00000449223 OR10G8Q8NGN5 311 aa14.15□□□□□ -0.14
RPS28-202ENST00000449223 DNAH3Q8TD57 4116 aa14.15□□□□□ -0.14
RPS28-202ENST00000449223 TRAV21A0A0B4J279 112 aa14.14□□□□□ -0.15
RPS28-202ENST00000449223 KIR3DS1Q14943 382 aa14.14□□□□□ -0.15
RPS28-202ENST00000449223 CT83Q5H943 113 aa14.14□□□□□ -0.15
RPS28-202ENST00000449223 MORN3Q6PF18 240 aaPredicted RBP14.14□□□□□ -0.15
RPS28-202ENST00000449223 DAZAP1Q96EP5 407 aaKnown RBP14.14□□□□□ -0.15
RPS28-202ENST00000449223 V9GYV3 84 aa14.14□□□□□ -0.15
RPS28-202ENST00000449223 NOTCH1P46531 2555 aa14.13□□□□□ -0.15
RPS28-202ENST00000449223 C7orf71A4D174 169 aa14.13□□□□□ -0.15
RPS28-202ENST00000449223 ZNF324O75467 553 aaPredicted RBP14.13□□□□□ -0.15
RPS28-202ENST00000449223 P01737 135 aa14.13□□□□□ -0.15
RPS28-202ENST00000449223 BTN1A1Q13410 526 aa14.13□□□□□ -0.15
RPS28-202ENST00000449223 C20orf144Q9BQM9 153 aa14.13□□□□□ -0.15
RPS28-202ENST00000449223 SRD5A3Q9H8P0 318 aa14.13□□□□□ -0.15
RPS28-202ENST00000449223 RPS10P5Q9NQ39 176 aa14.13□□□□□ -0.15
RPS28-202ENST00000449223 A8MZ25 164 aa14.12□□□□□ -0.15
RPS28-202ENST00000449223 LINC01559Q495D7 138 aa14.12□□□□□ -0.15
RPS28-202ENST00000449223 GIG44P09565 113 aaPredicted RBP14.11□□□□□ -0.15
RPS28-202ENST00000449223 RNASE4P34096 147 aaKnown RBP14.11□□□□□ -0.15
RPS28-202ENST00000449223 RPP21Q9H633 154 aaKnown RBP14.11□□□□□ -0.15
RPS28-202ENST00000449223 TRAV12-2A0A075B6T6 113 aa14.1□□□□□ -0.15
RPS28-202ENST00000449223 H7BYZ3 331 aa14.1□□□□□ -0.15
RPS28-202ENST00000449223 GATCO43716 136 aaKnown RBP14.1□□□□□ -0.15
RPS28-202ENST00000449223 C11orf21Q9P2W6 132 aa14.1□□□□□ -0.15
RPS28-202ENST00000449223 KIR2DL5BA0A0G2JN68 375 aa14.1□□□□□ -0.15
RPS28-202ENST00000449223 KIR2DL5BA0A0G2JPC4 375 aa14.1□□□□□ -0.15
RPS28-202ENST00000449223 CXorf65A6NEN9 183 aa14.1□□□□□ -0.15
RPS28-202ENST00000449223 ZNF705GA8MUZ8 300 aaPredicted RBP14.1□□□□□ -0.15
RPS28-202ENST00000449223 J3KRW8 73 aa14.1□□□□□ -0.15
RPS28-202ENST00000449223 TDRG1Q3Y452 100 aa14.1□□□□□ -0.15
RPS28-202ENST00000449223 Q6ZQT7 251 aa14.1□□□□□ -0.15
RPS28-202ENST00000449223 ZNF575Q86XF7 245 aa14.1□□□□□ -0.15
RPS28-202ENST00000449223 KIR2DL5AQ8N109 375 aa14.1□□□□□ -0.15
RPS28-202ENST00000449223 KIR2DL5BQ8NHK3 375 aa14.1□□□□□ -0.15
RPS28-202ENST00000449223 C1QTNF4Q9BXJ3 329 aa14.1□□□□□ -0.15
RPS28-202ENST00000449223 DNHD1Q96M86 4753 aa14.09□□□□□ -0.15
RPS28-202ENST00000449223 IMMP2LQ96T52 175 aa14.09□□□□□ -0.15
RPS28-202ENST00000449223 LOC102724200A0A096LPH7 203 aaPredicted RBP14.08□□□□□ -0.16
RPS28-202ENST00000449223 TRAV12-3A0A0B4J271 114 aa14.08□□□□□ -0.16
RPS28-202ENST00000449223 IGKV3D-20A0A0C4DH25 116 aa14.08□□□□□ -0.16
RPS28-202ENST00000449223 FAM231BA6NCW3 169 aa14.08□□□□□ -0.16
RPS28-202ENST00000449223 INSP01308 110 aa14.08□□□□□ -0.16
RPS28-202ENST00000449223 CXCL1P09341 107 aa14.08□□□□□ -0.16
RPS28-202ENST00000449223 IGHV4-30-4P0DP06 118 aa14.08□□□□□ -0.16
RPS28-202ENST00000449223 FXYD7P58549 80 aa14.08□□□□□ -0.16
RPS28-202ENST00000449223 GFRA4Q9GZZ7 299 aa14.08□□□□□ -0.16
RPS28-202ENST00000449223 A8MWL6 223 aa14.07□□□□□ -0.16
RPS28-202ENST00000449223 RBMY1A1P0DJD3 496 aaKnown RBP14.07□□□□□ -0.16
RPS28-202ENST00000449223 RBMY1CP0DJD4 496 aa14.07□□□□□ -0.16
RPS28-202ENST00000449223 RPL35AP18077 110 aaKnown RBP14.07□□□□□ -0.16
RPS28-202ENST00000449223 RPS20P60866 119 aaKnown RBP14.07□□□□□ -0.16
RPS28-202ENST00000449223 RBMY1FQ15415 496 aaKnown RBP14.07□□□□□ -0.16
RPS28-202ENST00000449223 OR2D3Q8NGH3 330 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms