RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 SNRPCP09234 159 aaKnown RBP5.42□□□□□ -1.54
CD44-211ENST00000442151 TCL1AP56279 114 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 NHLH2Q02577 135 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 NFE4Q86UQ8 179 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 CLRN3Q8NCR9 226 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 CMTM2Q8TAZ6 248 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 ATP5SQ99766 215 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 WDR61Q9GZS3 305 aaKnown RBP5.42□□□□□ -1.54
CD44-211ENST00000442151 TMPRSS5Q9H3S3 457 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 PTTG2Q9NZH5 202 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 ZNF492Q9P255 531 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 FUT9Q9Y231 359 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 ICOSQ9Y6W8 199 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 HERC2O95714 4834 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 HECTD4Q9Y4D8 3996 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 IGHV1OR15-1A0A075B7D0 117 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 A0A0J9YY99 117 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 OR7C2O60412 319 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 SPINK4O60575 86 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 ZNF324O75467 553 aaPredicted RBP5.41□□□□□ -1.54
CD44-211ENST00000442151 MRPL23Q16540 153 aaKnown RBP5.41□□□□□ -1.54
CD44-211ENST00000442151 ACOT6Q3I5F7 207 aaPredicted RBP5.41□□□□□ -1.54
CD44-211ENST00000442151 KHDC3LQ587J8 217 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 MORN5Q5VZ52 161 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 FAM159AQ6UWV7 190 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 SH2D6Q7Z4S9 175 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 PCNPQ8WW12 178 aaKnown RBP5.41□□□□□ -1.54
CD44-211ENST00000442151 FAM19A4Q96LR4 140 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 BATF3Q9NR55 127 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 GSN-AS1Q9NRJ2 163 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 PRO0255Q9UI72 69 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 TRGV11A0A075B6L2 103 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 A0A1W2PPV4 95 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 SSNA1O43805 119 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 CIDEAO60543 219 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 NDUFB4O95168 129 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 ERCC8Q13216 396 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 FAM122CQ6P4D5 195 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 TMED6Q8WW62 240 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 SLC25A2Q9BXI2 301 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 SH3BGRL3Q9H299 93 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 Q9H3A6 140 aa5.41□□□□□ -1.54
CD44-211ENST00000442151 SERTM2A0A1B0GWG4 89 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 M0R3E3 92 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 SIVA1O15304 175 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 CDK2AP2O75956 126 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 ORM1P02763 201 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 PYYP10082 97 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 ZNF266Q14584 549 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 ESRGQ1W209 222 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 FFAR4Q5NUL3 377 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 Q6ZTI0 123 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 MIR17HGQ75NE6 70 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 EXOC3-AS1Q8N2X6 119 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 ST6GAL2Q96JF0 529 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 NDFIP1Q9BT67 221 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 PARD6GQ9BYG4 376 aaPredicted RBP5.4□□□□□ -1.54
CD44-211ENST00000442151 HHLA3Q9XRX5 114 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 KLF12Q9Y4X4 402 aa5.4□□□□□ -1.54
CD44-211ENST00000442151 TRGV4A0A0C4DH28 118 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 K7EQM0 130 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 HOXA5P20719 270 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 RPL12P30050 165 aaKnown RBP5.39□□□□□ -1.55
CD44-211ENST00000442151 RANP62826 216 aaKnown RBP5.39□□□□□ -1.55
CD44-211ENST00000442151 CD300CQ08708 224 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 BTN1A1Q13410 526 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 KIR3DS1Q14943 382 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 LRRC37A5PQ49AS3 106 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 PQLC2Q6ZP29 291 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 IQCF2Q8IXL9 164 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 C11orf72Q8NBR9 251 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 THAP6Q8TBB0 222 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 KCNS1Q96KK3 526 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 FAM167A-AS1Q96KT0 104 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 VGLL1Q99990 258 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 TXNDC17Q9BRA2 123 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 MARVELD1Q9BSK0 173 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 OTORQ9NRC9 128 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 HSPB11Q9Y547 144 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 RYR1P21817 5038 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 TRAV21A0A0B4J279 112 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 FBLL1A6NHQ2 334 aaKnown RBP5.39□□□□□ -1.55
CD44-211ENST00000442151 MBP02144 154 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 UBE2L3P68036 154 aaKnown RBP5.39□□□□□ -1.55
CD44-211ENST00000442151 NEGR1Q7Z3B1 354 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 PPP1R1CQ8WVI7 109 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 FXYD5Q96DB9 178 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 OR5AC2Q9NZP5 309 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 TP53TG3Q9ULZ0 132 aa5.39□□□□□ -1.55
CD44-211ENST00000442151 KIAA1109Q2LD37 5005 aa5.38□□□□□ -1.55
CD44-211ENST00000442151 IGKV2-40A0A087WW87 121 aaPredicted RBP5.38□□□□□ -1.55
CD44-211ENST00000442151 A0A096LPF7 62 aa5.38□□□□□ -1.55
CD44-211ENST00000442151 SIX6O95475 246 aa5.38□□□□□ -1.55
CD44-211ENST00000442151 MPC2O95563 127 aa5.38□□□□□ -1.55
CD44-211ENST00000442151 IGKV2D-40P01614 121 aaPredicted RBP5.38□□□□□ -1.55
CD44-211ENST00000442151 OR10J4P0C629 311 aa5.38□□□□□ -1.55
CD44-211ENST00000442151 SRIP30626 198 aa5.38□□□□□ -1.55
CD44-211ENST00000442151 ZFAND2AQ8N6M9 145 aa5.38□□□□□ -1.55
CD44-211ENST00000442151 MBD2Q9UBB5 411 aa5.38□□□□□ -1.55
CD44-211ENST00000442151 NACAE9PAV3 2078 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms