RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ZNF415Q09FC8 603 aa12.77□□□□□ -0.37
AC004540.1-201ENST00000439120 VSIG2Q96IQ7 327 aa12.77□□□□□ -0.37
AC004540.1-201ENST00000439120 MRPL16Q9NX20 251 aaKnown RBP12.77□□□□□ -0.37
AC004540.1-201ENST00000439120 A0A096LPF7 62 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 A0A1W2PPQ1 181 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 RBAKDNA6NC62 111 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 A6NHS1 94 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 PAX4O43316 350 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 IGHV3-53P01767 116 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 ST6GAL2Q96JF0 529 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 ICOSQ9Y6W8 199 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 Q6ZQT7 251 aa12.75□□□□□ -0.37
AC004540.1-201ENST00000439120 HYLS1Q96M11 299 aa12.75□□□□□ -0.37
AC004540.1-201ENST00000439120 MBD2Q9UBB5 411 aa12.75□□□□□ -0.37
AC004540.1-201ENST00000439120 PCLOQ9Y6V0 5065 aa12.75□□□□□ -0.37
AC004540.1-201ENST00000439120 SLAQ13239 276 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 ZNF266Q14584 549 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 FAM74A1Q5RGS3 127 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 MUC21Q5SSG8 566 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 CMTM2Q8TAZ6 248 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 KRTAP1-5Q9BYS1 174 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 PRO0255Q9UI72 69 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 RPH3ALQ9UNE2 315 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 DNAH11Q96DT5 4516 aa12.73□□□□□ -0.37
AC004540.1-201ENST00000439120 ACOT6Q3I5F7 207 aaPredicted RBP12.73□□□□□ -0.37
AC004540.1-201ENST00000439120 FAM159AQ6UWV7 190 aa12.73□□□□□ -0.37
AC004540.1-201ENST00000439120 DYNC1H1Q14204 4646 aaKnown RBP12.73□□□□□ -0.37
AC004540.1-201ENST00000439120 MUC4Q99102 2169 aa12.72□□□□□ -0.37
AC004540.1-201ENST00000439120 A0A1W2PPV4 95 aa12.72□□□□□ -0.37
AC004540.1-201ENST00000439120 DIRC3C9JPN6 131 aa12.72□□□□□ -0.37
AC004540.1-201ENST00000439120 OTORQ9NRC9 128 aa12.72□□□□□ -0.37
AC004540.1-201ENST00000439120 HHLA3Q9XRX5 114 aa12.72□□□□□ -0.37
AC004540.1-201ENST00000439120 LENEPQ9Y5L5 61 aa12.72□□□□□ -0.37
AC004540.1-201ENST00000439120 TRGV11A0A075B6L2 103 aa12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 TRGV4A0A0C4DH28 118 aa12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 SIVA1O15304 175 aa12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 BTF3P20290 206 aaKnown RBP12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 SPATA12Q7Z6I5 190 aa12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 C8orf49Q96NF6 230 aa12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 NAGKQ9UJ70 344 aa12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 PGPA6NDG6 321 aa12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 EIF3GO75821 320 aaKnown RBP eCLIP12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 MRPL23Q16540 153 aaKnown RBP12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 TMEM183BQ1AE95 376 aa12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 Q6AWC8 147 aa12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 PQLC2Q6ZP29 291 aa12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 TMEM183AQ8IXX5 376 aa12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 MDFICQ9P1T7 246 aa12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 NXPH4O95158 308 aa12.69□□□□□ -0.38
AC004540.1-201ENST00000439120 CRYBA4P53673 196 aa12.69□□□□□ -0.38
AC004540.1-201ENST00000439120 TMED6Q8WW62 240 aa12.69□□□□□ -0.38
AC004540.1-201ENST00000439120 SPXQ9BT56 116 aa12.69□□□□□ -0.38
AC004540.1-201ENST00000439120 CDK2AP2O75956 126 aa12.68□□□□□ -0.38
AC004540.1-201ENST00000439120 FHL2Q14192 279 aa12.68□□□□□ -0.38
AC004540.1-201ENST00000439120 GOLT1AQ6ZVE7 132 aa12.68□□□□□ -0.38
AC004540.1-201ENST00000439120 PCNPQ8WW12 178 aaKnown RBP12.68□□□□□ -0.38
AC004540.1-201ENST00000439120 WFDC1Q9HC57 220 aa12.68□□□□□ -0.38
AC004540.1-201ENST00000439120 LINC00315P59091 139 aa12.67□□□□□ -0.38
AC004540.1-201ENST00000439120 RAB2AP61019 212 aa12.67□□□□□ -0.38
AC004540.1-201ENST00000439120 NEGR1Q7Z3B1 354 aa12.67□□□□□ -0.38
AC004540.1-201ENST00000439120 OR10G4Q8NGN3 311 aa12.67□□□□□ -0.38
AC004540.1-201ENST00000439120 OR10G9Q8NGN4 311 aa12.67□□□□□ -0.38
AC004540.1-201ENST00000439120 OR10G7Q8NGN6 311 aa12.67□□□□□ -0.38
AC004540.1-201ENST00000439120 HMGB3O15347 200 aaKnown RBP12.66□□□□□ -0.38
AC004540.1-201ENST00000439120 SFTA3P0C7M3 94 aa12.66□□□□□ -0.38
AC004540.1-201ENST00000439120 SRIP30626 198 aa12.66□□□□□ -0.38
AC004540.1-201ENST00000439120 TRAV21A0A0B4J279 112 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 LYPD5Q6UWN5 251 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 ARL6IP6Q8N6S5 226 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 RASL10AQ92737 203 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 ZNF479Q96JC4 524 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 NDFIP1Q9BT67 221 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 TREM1Q9NP99 234 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 ALG5Q9Y673 324 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 TRAV9-2A0A087WT02 112 aa12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 F6UZH7 168 aa12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 ORM1P02763 201 aa12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 CDC34P49427 236 aaPredicted RBP12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 TDRG1Q3Y452 100 aa12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 MAPKAPK5-AS1Q8N8E1 139 aa12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 SDF2L1Q9HCN8 221 aa12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 TRAV8-1A0A0A6YYK1 113 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 C9JCJ5 164 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 K7EQD1 137 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 EREGO14944 169 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 ARL14EPLP0DKL9 152 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 GYPEP15421 78 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 GNG5P63218 68 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 IQCF2Q8IXL9 164 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 HSD17B11Q8NBQ5 300 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 OR4C5Q8NGB2 326 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 KCNS1Q96KK3 526 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 TRAV4A0A0B4J268 109 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 K7EQM0 130 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 M0R2P5 195 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 GNRH2O43555 120 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 TXNDC17Q9BRA2 123 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 MED28Q9H204 178 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 BATF3Q9NR55 127 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 LY96Q9Y6Y9 160 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms