RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ZNF415Q09FC8 603 aa12.77□□□□□ -0.37
AC004540.1-201ENST00000439120 VSIG2Q96IQ7 327 aa12.77□□□□□ -0.37
AC004540.1-201ENST00000439120 MRPL16Q9NX20 251 aaKnown RBP12.77□□□□□ -0.37
AC004540.1-201ENST00000439120 A0A096LPF7 62 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 A0A1W2PPQ1 181 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 RBAKDNA6NC62 111 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 A6NHS1 94 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 PAX4O43316 350 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 IGHV3-53P01767 116 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 ST6GAL2Q96JF0 529 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 ICOSQ9Y6W8 199 aa12.76□□□□□ -0.37
AC004540.1-201ENST00000439120 Q6ZQT7 251 aa12.75□□□□□ -0.37
AC004540.1-201ENST00000439120 HYLS1Q96M11 299 aa12.75□□□□□ -0.37
AC004540.1-201ENST00000439120 MBD2Q9UBB5 411 aa12.75□□□□□ -0.37
AC004540.1-201ENST00000439120 PCLOQ9Y6V0 5065 aa12.75□□□□□ -0.37
AC004540.1-201ENST00000439120 SLAQ13239 276 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 ZNF266Q14584 549 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 FAM74A1Q5RGS3 127 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 MUC21Q5SSG8 566 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 CMTM2Q8TAZ6 248 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 KRTAP1-5Q9BYS1 174 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 PRO0255Q9UI72 69 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 RPH3ALQ9UNE2 315 aa12.74□□□□□ -0.37
AC004540.1-201ENST00000439120 DNAH11Q96DT5 4516 aa12.73□□□□□ -0.37
AC004540.1-201ENST00000439120 ACOT6Q3I5F7 207 aaPredicted RBP12.73□□□□□ -0.37
AC004540.1-201ENST00000439120 FAM159AQ6UWV7 190 aa12.73□□□□□ -0.37
AC004540.1-201ENST00000439120 DYNC1H1Q14204 4646 aaKnown RBP12.73□□□□□ -0.37
AC004540.1-201ENST00000439120 MUC4Q99102 2169 aa12.72□□□□□ -0.37
AC004540.1-201ENST00000439120 A0A1W2PPV4 95 aa12.72□□□□□ -0.37
AC004540.1-201ENST00000439120 DIRC3C9JPN6 131 aa12.72□□□□□ -0.37
AC004540.1-201ENST00000439120 OTORQ9NRC9 128 aa12.72□□□□□ -0.37
AC004540.1-201ENST00000439120 HHLA3Q9XRX5 114 aa12.72□□□□□ -0.37
AC004540.1-201ENST00000439120 LENEPQ9Y5L5 61 aa12.72□□□□□ -0.37
AC004540.1-201ENST00000439120 TRGV11A0A075B6L2 103 aa12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 TRGV4A0A0C4DH28 118 aa12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 SIVA1O15304 175 aa12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 BTF3P20290 206 aaKnown RBP12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 SPATA12Q7Z6I5 190 aa12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 C8orf49Q96NF6 230 aa12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 NAGKQ9UJ70 344 aa12.71□□□□□ -0.37
AC004540.1-201ENST00000439120 PGPA6NDG6 321 aa12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 EIF3GO75821 320 aaKnown RBP eCLIP12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 MRPL23Q16540 153 aaKnown RBP12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 TMEM183BQ1AE95 376 aa12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 Q6AWC8 147 aa12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 PQLC2Q6ZP29 291 aa12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 TMEM183AQ8IXX5 376 aa12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 MDFICQ9P1T7 246 aa12.7□□□□□ -0.38
AC004540.1-201ENST00000439120 NXPH4O95158 308 aa12.69□□□□□ -0.38
AC004540.1-201ENST00000439120 CRYBA4P53673 196 aa12.69□□□□□ -0.38
AC004540.1-201ENST00000439120 TMED6Q8WW62 240 aa12.69□□□□□ -0.38
AC004540.1-201ENST00000439120 SPXQ9BT56 116 aa12.69□□□□□ -0.38
AC004540.1-201ENST00000439120 CDK2AP2O75956 126 aa12.68□□□□□ -0.38
AC004540.1-201ENST00000439120 FHL2Q14192 279 aa12.68□□□□□ -0.38
AC004540.1-201ENST00000439120 GOLT1AQ6ZVE7 132 aa12.68□□□□□ -0.38
AC004540.1-201ENST00000439120 PCNPQ8WW12 178 aaKnown RBP12.68□□□□□ -0.38
AC004540.1-201ENST00000439120 WFDC1Q9HC57 220 aa12.68□□□□□ -0.38
AC004540.1-201ENST00000439120 LINC00315P59091 139 aa12.67□□□□□ -0.38
AC004540.1-201ENST00000439120 RAB2AP61019 212 aa12.67□□□□□ -0.38
AC004540.1-201ENST00000439120 NEGR1Q7Z3B1 354 aa12.67□□□□□ -0.38
AC004540.1-201ENST00000439120 OR10G4Q8NGN3 311 aa12.67□□□□□ -0.38
AC004540.1-201ENST00000439120 OR10G9Q8NGN4 311 aa12.67□□□□□ -0.38
AC004540.1-201ENST00000439120 OR10G7Q8NGN6 311 aa12.67□□□□□ -0.38
AC004540.1-201ENST00000439120 HMGB3O15347 200 aaKnown RBP12.66□□□□□ -0.38
AC004540.1-201ENST00000439120 SFTA3P0C7M3 94 aa12.66□□□□□ -0.38
AC004540.1-201ENST00000439120 SRIP30626 198 aa12.66□□□□□ -0.38
AC004540.1-201ENST00000439120 TRAV21A0A0B4J279 112 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 LYPD5Q6UWN5 251 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 ARL6IP6Q8N6S5 226 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 RASL10AQ92737 203 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 ZNF479Q96JC4 524 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 NDFIP1Q9BT67 221 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 TREM1Q9NP99 234 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 ALG5Q9Y673 324 aa12.65□□□□□ -0.38
AC004540.1-201ENST00000439120 TRAV9-2A0A087WT02 112 aa12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 F6UZH7 168 aa12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 ORM1P02763 201 aa12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 CDC34P49427 236 aaPredicted RBP12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 TDRG1Q3Y452 100 aa12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 MAPKAPK5-AS1Q8N8E1 139 aa12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 SDF2L1Q9HCN8 221 aa12.64□□□□□ -0.39
AC004540.1-201ENST00000439120 TRAV8-1A0A0A6YYK1 113 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 C9JCJ5 164 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 K7EQD1 137 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 EREGO14944 169 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 ARL14EPLP0DKL9 152 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 GYPEP15421 78 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 GNG5P63218 68 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 IQCF2Q8IXL9 164 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 HSD17B11Q8NBQ5 300 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 OR4C5Q8NGB2 326 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 KCNS1Q96KK3 526 aa12.63□□□□□ -0.39
AC004540.1-201ENST00000439120 TRAV4A0A0B4J268 109 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 K7EQM0 130 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 M0R2P5 195 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 GNRH2O43555 120 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 TXNDC17Q9BRA2 123 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 MED28Q9H204 178 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 BATF3Q9NR55 127 aa12.62□□□□□ -0.39
AC004540.1-201ENST00000439120 LY96Q9Y6Y9 160 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms