RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 HSPB11Q9Y547 144 aa11.72□□□□□ -0.53
CPSF4-203ENST00000430038 RGS13O14921 159 aa11.71□□□□□ -0.53
CPSF4-203ENST00000430038 PRAF2O60831 178 aa11.71□□□□□ -0.53
CPSF4-203ENST00000430038 MUC21Q5SSG8 566 aa11.71□□□□□ -0.53
CPSF4-203ENST00000430038 IBA57Q5T440 356 aaKnown RBP11.71□□□□□ -0.53
CPSF4-203ENST00000430038 Q6ZRN7 208 aaPredicted RBP11.71□□□□□ -0.53
CPSF4-203ENST00000430038 ST6GAL2Q96JF0 529 aa11.71□□□□□ -0.53
CPSF4-203ENST00000430038 TNFRSF18Q9Y5U5 241 aa11.71□□□□□ -0.53
CPSF4-203ENST00000430038 OR7C2O60412 319 aa11.7□□□□□ -0.54
CPSF4-203ENST00000430038 CYCSP99999 105 aaKnown RBP11.7□□□□□ -0.54
CPSF4-203ENST00000430038 FFAR4Q5NUL3 377 aa11.7□□□□□ -0.54
CPSF4-203ENST00000430038 DIRC3C9JPN6 131 aa11.69□□□□□ -0.54
CPSF4-203ENST00000430038 CDK2AP2O75956 126 aa11.69□□□□□ -0.54
CPSF4-203ENST00000430038 FUSP35637 526 aaKnown RBP eCLIP11.69□□□□□ -0.54
CPSF4-203ENST00000430038 CRYBA4P53673 196 aa11.69□□□□□ -0.54
CPSF4-203ENST00000430038 ZNF266Q14584 549 aa11.69□□□□□ -0.54
CPSF4-203ENST00000430038 RBAKDNA6NC62 111 aa11.68□□□□□ -0.54
CPSF4-203ENST00000430038 PAX4O43316 350 aa11.68□□□□□ -0.54
CPSF4-203ENST00000430038 SFTA3P0C7M3 94 aa11.68□□□□□ -0.54
CPSF4-203ENST00000430038 RPL12P30050 165 aaKnown RBP11.68□□□□□ -0.54
CPSF4-203ENST00000430038 LINC00315P59091 139 aa11.68□□□□□ -0.54
CPSF4-203ENST00000430038 TVP23CQ96ET8 276 aa11.68□□□□□ -0.54
CPSF4-203ENST00000430038 C8orf49Q96NF6 230 aa11.68□□□□□ -0.54
CPSF4-203ENST00000430038 PTTG2Q9NZH5 202 aa11.68□□□□□ -0.54
CPSF4-203ENST00000430038 MBD2Q9UBB5 411 aa11.68□□□□□ -0.54
CPSF4-203ENST00000430038 TRBV7-9A0A0J9YWB2 115 aa11.67□□□□□ -0.54
CPSF4-203ENST00000430038 A0A1W2PPQ1 181 aa11.67□□□□□ -0.54
CPSF4-203ENST00000430038 C17orf112F2Z3M2 114 aa11.67□□□□□ -0.54
CPSF4-203ENST00000430038 UBE2L3P68036 154 aaKnown RBP11.67□□□□□ -0.54
CPSF4-203ENST00000430038 TTC32Q5I0X7 151 aa11.67□□□□□ -0.54
CPSF4-203ENST00000430038 LYPD5Q6UWN5 251 aa11.67□□□□□ -0.54
CPSF4-203ENST00000430038 LYPD1Q8N2G4 141 aa11.67□□□□□ -0.54
CPSF4-203ENST00000430038 ZNF479Q96JC4 524 aa11.67□□□□□ -0.54
CPSF4-203ENST00000430038 HYLS1Q96M11 299 aa11.67□□□□□ -0.54
CPSF4-203ENST00000430038 SSNA1O43805 119 aa11.66□□□□□ -0.54
CPSF4-203ENST00000430038 Q6AWC8 147 aa11.66□□□□□ -0.54
CPSF4-203ENST00000430038 HHLA3Q9XRX5 114 aa11.66□□□□□ -0.54
CPSF4-203ENST00000430038 PGPA6NDG6 321 aa11.65□□□□□ -0.54
CPSF4-203ENST00000430038 SIVA1O15304 175 aa11.65□□□□□ -0.54
CPSF4-203ENST00000430038 HMGB3O15347 200 aaKnown RBP11.65□□□□□ -0.54
CPSF4-203ENST00000430038 GNRH2O43555 120 aa11.65□□□□□ -0.54
CPSF4-203ENST00000430038 NXPH4O95158 308 aa11.65□□□□□ -0.54
CPSF4-203ENST00000430038 BTF3P20290 206 aaKnown RBP11.65□□□□□ -0.54
CPSF4-203ENST00000430038 RAB2AP61019 212 aa11.65□□□□□ -0.54
CPSF4-203ENST00000430038 TMEM183BQ1AE95 376 aa11.65□□□□□ -0.54
CPSF4-203ENST00000430038 TMEM183AQ8IXX5 376 aa11.65□□□□□ -0.54
CPSF4-203ENST00000430038 MAPKAPK5-AS1Q8N8E1 139 aa11.65□□□□□ -0.54
CPSF4-203ENST00000430038 ARPC5LQ9BPX5 153 aa11.65□□□□□ -0.54
CPSF4-203ENST00000430038 KCNIP2Q9NS61 270 aa11.65□□□□□ -0.54
CPSF4-203ENST00000430038 PRO0255Q9UI72 69 aa11.65□□□□□ -0.54
CPSF4-203ENST00000430038 ICOSQ9Y6W8 199 aa11.65□□□□□ -0.54
CPSF4-203ENST00000430038 TRAV8-1A0A0A6YYK1 113 aa11.64□□□□□ -0.55
CPSF4-203ENST00000430038 CSN1S1P47710 185 aa11.64□□□□□ -0.55
CPSF4-203ENST00000430038 ZNF415Q09FC8 603 aa11.64□□□□□ -0.55
CPSF4-203ENST00000430038 GNG5P63218 68 aa11.63□□□□□ -0.55
CPSF4-203ENST00000430038 KHDC3LQ587J8 217 aa11.63□□□□□ -0.55
CPSF4-203ENST00000430038 SCGB1C1Q8TD33 95 aa11.63□□□□□ -0.55
CPSF4-203ENST00000430038 RASL10AQ92737 203 aa11.63□□□□□ -0.55
CPSF4-203ENST00000430038 RPH3ALQ9UNE2 315 aa11.63□□□□□ -0.55
CPSF4-203ENST00000430038 K7EQD1 137 aa11.62□□□□□ -0.55
CPSF4-203ENST00000430038 IFNA5P01569 189 aa11.62□□□□□ -0.55
CPSF4-203ENST00000430038 GOLT1AQ6ZVE7 132 aa11.62□□□□□ -0.55
CPSF4-203ENST00000430038 IQCF2Q8IXL9 164 aa11.62□□□□□ -0.55
CPSF4-203ENST00000430038 SGK494Q96LW2 274 aa11.62□□□□□ -0.55
CPSF4-203ENST00000430038 OTORQ9NRC9 128 aa11.62□□□□□ -0.55
CPSF4-203ENST00000430038 LENEPQ9Y5L5 61 aa11.62□□□□□ -0.55
CPSF4-203ENST00000430038 IGHV3-16A0A0C4DH30 117 aa11.61□□□□□ -0.55
CPSF4-203ENST00000430038 LOC100131303A0A0U1RQF7 123 aa11.61□□□□□ -0.55
CPSF4-203ENST00000430038 F6UZH7 168 aa11.61□□□□□ -0.55
CPSF4-203ENST00000430038 TDRG1Q3Y452 100 aa11.61□□□□□ -0.55
CPSF4-203ENST00000430038 OR10G4Q8NGN3 311 aa11.61□□□□□ -0.55
CPSF4-203ENST00000430038 TMED6Q8WW62 240 aa11.61□□□□□ -0.55
CPSF4-203ENST00000430038 C11orf21Q9P2W6 132 aa11.61□□□□□ -0.55
CPSF4-203ENST00000430038 TRGV4A0A0C4DH28 118 aa11.6□□□□□ -0.55
CPSF4-203ENST00000430038 TAS2R45P59539 299 aa11.6□□□□□ -0.55
CPSF4-203ENST00000430038 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
CPSF4-203ENST00000430038 Q5BKY6 102 aa11.6□□□□□ -0.55
CPSF4-203ENST00000430038 FAM159AQ6UWV7 190 aa11.6□□□□□ -0.55
CPSF4-203ENST00000430038 WFDC10BQ8IUB3 73 aa11.6□□□□□ -0.55
CPSF4-203ENST00000430038 Q8N1X5 172 aa11.6□□□□□ -0.55
CPSF4-203ENST00000430038 NAGKQ9UJ70 344 aa11.6□□□□□ -0.55
CPSF4-203ENST00000430038 ALG5Q9Y673 324 aa11.6□□□□□ -0.55
CPSF4-203ENST00000430038 TYMSP04818 313 aa11.59□□□□□ -0.55
CPSF4-203ENST00000430038 PET100P0DJ07 73 aa11.59□□□□□ -0.55
CPSF4-203ENST00000430038 GYPEP15421 78 aa11.59□□□□□ -0.55
CPSF4-203ENST00000430038 ZNF80P51504 273 aaPredicted RBP11.59□□□□□ -0.55
CPSF4-203ENST00000430038 SLAQ13239 276 aa11.59□□□□□ -0.55
CPSF4-203ENST00000430038 ACOT6Q3I5F7 207 aaPredicted RBP11.59□□□□□ -0.55
CPSF4-203ENST00000430038 NEGR1Q7Z3B1 354 aa11.59□□□□□ -0.55
CPSF4-203ENST00000430038 OR10G9Q8NGN4 311 aa11.59□□□□□ -0.55
CPSF4-203ENST00000430038 OR10G7Q8NGN6 311 aa11.59□□□□□ -0.55
CPSF4-203ENST00000430038 SPXQ9BT56 116 aa11.59□□□□□ -0.55
CPSF4-203ENST00000430038 FAT1Q14517 4588 aa11.59□□□□□ -0.55
CPSF4-203ENST00000430038 DNAH10OSP0CZ25 163 aa11.58□□□□□ -0.56
CPSF4-203ENST00000430038 DEFA1P59665 94 aa11.58□□□□□ -0.56
CPSF4-203ENST00000430038 DEFA3P59666 94 aa11.58□□□□□ -0.56
CPSF4-203ENST00000430038 PQLC2Q6ZP29 291 aa11.58□□□□□ -0.56
CPSF4-203ENST00000430038 TRGV11A0A075B6L2 103 aa11.57□□□□□ -0.56
CPSF4-203ENST00000430038 A0A1W2PPV4 95 aa11.57□□□□□ -0.56
CPSF4-203ENST00000430038 ARL14EPLP0DKL9 152 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms