RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
MSH5-208ENST00000429846 LYPD1Q8N2G4 141 aa10.19□□□□□ -0.78
MSH5-208ENST00000429846 FXYD5Q96DB9 178 aa10.19□□□□□ -0.78
MSH5-208ENST00000429846 PHYHIPLQ96FC7 376 aa10.19□□□□□ -0.78
MSH5-208ENST00000429846 NMES1Q9C002 83 aa10.19□□□□□ -0.78
MSH5-208ENST00000429846 PTTG2Q9NZH5 202 aa10.19□□□□□ -0.78
MSH5-208ENST00000429846 HHLA3Q9XRX5 114 aa10.19□□□□□ -0.78
MSH5-208ENST00000429846 IGHV3-53P01767 116 aa10.18□□□□□ -0.78
MSH5-208ENST00000429846 ASAH1Q13510 395 aa10.18□□□□□ -0.78
MSH5-208ENST00000429846 NEGR1Q7Z3B1 354 aa10.18□□□□□ -0.78
MSH5-208ENST00000429846 Q8TAT8 98 aa10.18□□□□□ -0.78
MSH5-208ENST00000429846 WDR61Q9GZS3 305 aaKnown RBP10.18□□□□□ -0.78
MSH5-208ENST00000429846 PGPEP1Q9NXJ5 209 aa10.18□□□□□ -0.78
MSH5-208ENST00000429846 LENEPQ9Y5L5 61 aa10.18□□□□□ -0.78
MSH5-208ENST00000429846 OR7C2O60412 319 aa10.17□□□□□ -0.78
MSH5-208ENST00000429846 CYCSP99999 105 aaKnown RBP10.17□□□□□ -0.78
MSH5-208ENST00000429846 FHL2Q14192 279 aa10.17□□□□□ -0.78
MSH5-208ENST00000429846 ZNF266Q14584 549 aa10.17□□□□□ -0.78
MSH5-208ENST00000429846 LYPD5Q6UWN5 251 aa10.17□□□□□ -0.78
MSH5-208ENST00000429846 IQCF2Q8IXL9 164 aa10.17□□□□□ -0.78
MSH5-208ENST00000429846 C8orf49Q96NF6 230 aa10.17□□□□□ -0.78
MSH5-208ENST00000429846 DNAH5Q8TE73 4624 aa10.17□□□□□ -0.78
MSH5-208ENST00000429846 TRAV9-2A0A087WT02 112 aa10.16□□□□□ -0.78
MSH5-208ENST00000429846 TRGV4A0A0C4DH28 118 aa10.16□□□□□ -0.78
MSH5-208ENST00000429846 UBE2L3P68036 154 aaKnown RBP10.16□□□□□ -0.78
MSH5-208ENST00000429846 Q6AWC8 147 aa10.16□□□□□ -0.78
MSH5-208ENST00000429846 Q6ZQT7 251 aa10.16□□□□□ -0.78
MSH5-208ENST00000429846 ENKURQ8TC29 256 aa10.16□□□□□ -0.78
MSH5-208ENST00000429846 S100ZQ8WXG8 99 aa10.16□□□□□ -0.78
MSH5-208ENST00000429846 SPXQ9BT56 116 aa10.16□□□□□ -0.78
MSH5-208ENST00000429846 LY96Q9Y6Y9 160 aa10.16□□□□□ -0.78
MSH5-208ENST00000429846 TRGV11A0A075B6L2 103 aa10.15□□□□□ -0.78
MSH5-208ENST00000429846 PRAF2O60831 178 aa10.15□□□□□ -0.78
MSH5-208ENST00000429846 ORM1P02763 201 aa10.15□□□□□ -0.78
MSH5-208ENST00000429846 SRIP30626 198 aa10.15□□□□□ -0.78
MSH5-208ENST00000429846 TAS2R45P59539 299 aa10.15□□□□□ -0.78
MSH5-208ENST00000429846 LRRC37A5PQ49AS3 106 aa10.15□□□□□ -0.78
MSH5-208ENST00000429846 KHDC3LQ587J8 217 aa10.15□□□□□ -0.78
MSH5-208ENST00000429846 OR10G4Q8NGN3 311 aa10.15□□□□□ -0.78
MSH5-208ENST00000429846 PCNPQ8WW12 178 aaKnown RBP10.15□□□□□ -0.78
MSH5-208ENST00000429846 TMED6Q8WW62 240 aa10.15□□□□□ -0.78
MSH5-208ENST00000429846 RASL10AQ92737 203 aa10.15□□□□□ -0.78
MSH5-208ENST00000429846 ATP5SQ99766 215 aa10.15□□□□□ -0.78
MSH5-208ENST00000429846 OR5AC2Q9NZP5 309 aa10.15□□□□□ -0.78
MSH5-208ENST00000429846 APOBP04114 4563 aaKnown RBP10.15□□□□□ -0.79
MSH5-208ENST00000429846 K7EQD1 137 aa10.14□□□□□ -0.79
MSH5-208ENST00000429846 SIX6O95475 246 aa10.14□□□□□ -0.79
MSH5-208ENST00000429846 PET100P0DJ07 73 aa10.14□□□□□ -0.79
MSH5-208ENST00000429846 RANP62826 216 aaKnown RBP10.14□□□□□ -0.79
MSH5-208ENST00000429846 MUC21Q5SSG8 566 aa10.14□□□□□ -0.79
MSH5-208ENST00000429846 FAM159AQ6UWV7 190 aa10.14□□□□□ -0.79
MSH5-208ENST00000429846 EPM2AB3EWF7 344 aa10.13□□□□□ -0.79
MSH5-208ENST00000429846 H0YIZ8 118 aa10.13□□□□□ -0.79
MSH5-208ENST00000429846 TMEM183BQ1AE95 376 aa10.13□□□□□ -0.79
MSH5-208ENST00000429846 TDRG1Q3Y452 100 aa10.13□□□□□ -0.79
MSH5-208ENST00000429846 TMEM183AQ8IXX5 376 aa10.13□□□□□ -0.79
MSH5-208ENST00000429846 ZNF479Q96JC4 524 aa10.13□□□□□ -0.79
MSH5-208ENST00000429846 TXNDC17Q9BRA2 123 aa10.13□□□□□ -0.79
MSH5-208ENST00000429846 MDFICQ9P1T7 246 aa10.13□□□□□ -0.79
MSH5-208ENST00000429846 C9JCJ5 164 aa10.12□□□□□ -0.79
MSH5-208ENST00000429846 DIRC3C9JPN6 131 aa10.12□□□□□ -0.79
MSH5-208ENST00000429846 SFTA3P0C7M3 94 aa10.12□□□□□ -0.79
MSH5-208ENST00000429846 EVI2AP22794 236 aa10.12□□□□□ -0.79
MSH5-208ENST00000429846 FFAR4Q5NUL3 377 aa10.12□□□□□ -0.79
MSH5-208ENST00000429846 FAM74A1Q5RGS3 127 aa10.12□□□□□ -0.79
MSH5-208ENST00000429846 C10orf126Q8N4M7 172 aa10.12□□□□□ -0.79
MSH5-208ENST00000429846 MSRB1Q9NZV6 116 aa10.12□□□□□ -0.79
MSH5-208ENST00000429846 A0A087WTM6 91 aa10.11□□□□□ -0.79
MSH5-208ENST00000429846 TRAV4A0A0B4J268 109 aa10.11□□□□□ -0.79
MSH5-208ENST00000429846 DNAH10OSP0CZ25 163 aa10.11□□□□□ -0.79
MSH5-208ENST00000429846 GYPEP15421 78 aa10.11□□□□□ -0.79
MSH5-208ENST00000429846 SH2D6Q7Z4S9 175 aa10.11□□□□□ -0.79
MSH5-208ENST00000429846 ARL6IP6Q8N6S5 226 aa10.11□□□□□ -0.79
MSH5-208ENST00000429846 CMTM2Q8TAZ6 248 aa10.11□□□□□ -0.79
MSH5-208ENST00000429846 PPP1R1CQ8WVI7 109 aa10.11□□□□□ -0.79
MSH5-208ENST00000429846 HSPB11Q9Y547 144 aa10.11□□□□□ -0.79
MSH5-208ENST00000429846 TNFRSF18Q9Y5U5 241 aa10.11□□□□□ -0.79
MSH5-208ENST00000429846 UPK1BO75841 260 aa10.1□□□□□ -0.79
MSH5-208ENST00000429846 IFNA5P01569 189 aa10.1□□□□□ -0.79
MSH5-208ENST00000429846 H2BFSP57053 126 aa10.1□□□□□ -0.79
MSH5-208ENST00000429846 WFDC10BQ8IUB3 73 aa10.1□□□□□ -0.79
MSH5-208ENST00000429846 SCGB1C1Q8TD33 95 aa10.1□□□□□ -0.79
MSH5-208ENST00000429846 OTORQ9NRC9 128 aa10.1□□□□□ -0.79
MSH5-208ENST00000429846 TRAV21A0A0B4J279 112 aa10.09□□□□□ -0.79
MSH5-208ENST00000429846 INMT-MINDY4F8WBC2 141 aa10.09□□□□□ -0.79
MSH5-208ENST00000429846 M0R2P5 195 aa10.09□□□□□ -0.79
MSH5-208ENST00000429846 PQLC2Q6ZP29 291 aa10.09□□□□□ -0.79
MSH5-208ENST00000429846 OR4C5Q8NGB2 326 aa10.09□□□□□ -0.79
MSH5-208ENST00000429846 HYLS1Q96M11 299 aa10.09□□□□□ -0.79
MSH5-208ENST00000429846 NAGKQ9UJ70 344 aa10.09□□□□□ -0.79
MSH5-208ENST00000429846 BOLA1Q9Y3E2 137 aa10.09□□□□□ -0.79
MSH5-208ENST00000429846 MPC2O95563 127 aa10.08□□□□□ -0.8
MSH5-208ENST00000429846 RPL12P30050 165 aaKnown RBP10.08□□□□□ -0.8
MSH5-208ENST00000429846 TIRAPP58753 221 aa10.08□□□□□ -0.8
MSH5-208ENST00000429846 IGHV3-16A0A0C4DH30 117 aa10.07□□□□□ -0.8
MSH5-208ENST00000429846 PGPA6NDG6 321 aa10.07□□□□□ -0.8
MSH5-208ENST00000429846 CRYGDP07320 174 aa10.07□□□□□ -0.8
MSH5-208ENST00000429846 XGP55808 180 aa10.07□□□□□ -0.8
MSH5-208ENST00000429846 ACOT6Q3I5F7 207 aaPredicted RBP10.07□□□□□ -0.8
MSH5-208ENST00000429846 KCNS1Q96KK3 526 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms